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1.4.0-DEV-efa66facf6.log
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Julia Version 1.4.0-DEV.648
Commit efa66facf6 (2019-12-19 21:21 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed MuladdMacro ───────────────── v0.2.1
Installed Reexport ──────────────────── v0.2.0
Installed FunctionWrappers ──────────── v1.0.0
Installed Compat ────────────────────── v2.2.0
Installed ArrayInterface ────────────── v2.1.0
Installed DataStructures ────────────── v0.17.6
Installed StaticArrays ──────────────── v0.12.1
Installed Sundials ──────────────────── v3.8.1
Installed RecursiveArrayTools ───────── v1.2.0
Installed DiffEqDiffTools ───────────── v1.6.0
Installed RecursiveFactorization ────── v0.1.0
Installed TreeViews ─────────────────── v0.3.0
Installed Requires ──────────────────── v0.5.2
Installed TableTraits ───────────────── v1.0.0
Installed BinaryProvider ────────────── v0.5.8
Installed Parameters ────────────────── v0.12.0
Installed ZygoteRules ───────────────── v0.2.0
Installed OrderedCollections ────────── v1.1.0
Installed MacroTools ────────────────── v0.5.3
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed IterativeSolvers ──────────── v0.8.1
Installed DiffEqBase ────────────────── v6.9.4
Installed RecipesBase ───────────────── v0.7.0
Installed DocStringExtensions ───────── v0.8.1
Installed Roots ─────────────────────── v0.8.4
Updating `~/.julia/environments/v1.4/Project.toml`
[c3572dad] + Sundials v3.8.1
Updating `~/.julia/environments/v1.4/Manifest.toml`
[4fba245c] + ArrayInterface v2.1.0
[b99e7846] + BinaryProvider v0.5.8
[34da2185] + Compat v2.2.0
[864edb3b] + DataStructures v0.17.6
[2b5f629d] + DiffEqBase v6.9.4
[01453d9d] + DiffEqDiffTools v1.6.0
[ffbed154] + DocStringExtensions v0.8.1
[069b7b12] + FunctionWrappers v1.0.0
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[1914dd2f] + MacroTools v0.5.3
[46d2c3a1] + MuladdMacro v0.2.1
[bac558e1] + OrderedCollections v1.1.0
[d96e819e] + Parameters v0.12.0
[3cdcf5f2] + RecipesBase v0.7.0
[731186ca] + RecursiveArrayTools v1.2.0
[f2c3362d] + RecursiveFactorization v0.1.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[f2b01f46] + Roots v0.8.4
[90137ffa] + StaticArrays v0.12.1
[c3572dad] + Sundials v3.8.1
[3783bdb8] + TableTraits v1.0.0
[a2a6695c] + TreeViews v0.3.0
[700de1a5] + ZygoteRules v0.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Sundials → `~/.julia/packages/Sundials/MllUG/deps/build.log`
Path `/home/pkgeval/.julia/packages/Sundials/MllUG` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_Y7ssKp/Project.toml`
[c3572dad] + Sundials v3.8.1 [`~/.julia/packages/Sundials/MllUG`]
Updating `/tmp/jl_Y7ssKp/Manifest.toml`
[c3572dad] ~ Sundials v3.8.1 ⇒ v3.8.1 [`~/.julia/packages/Sundials/MllUG`]
Testing Sundials
Path `/home/pkgeval/.julia/packages/Sundials/MllUG` exists and looks like the correct package. Using existing path.
Installed ElasticArrays ─────────── v1.0.0
Installed DataAPI ───────────────── v1.1.0
Installed DiffRules ─────────────── v0.1.0
Installed Formatting ────────────── v0.4.1
Installed DiffEqProblemLibrary ──── v4.6.4
Installed DiffEqJump ────────────── v6.4.0
Installed ForwardDiff ───────────── v0.10.8
Installed FixedPolynomials ──────── v0.4.0
Installed DiffEqOperators ───────── v4.6.0
Installed OpenSpecFun_jll ───────── v0.5.3+1
Installed Latexify ──────────────── v0.12.3
Installed DiffResults ───────────── v1.0.1
Installed NameResolution ────────── v0.1.3
Installed BandedMatrices ────────── v0.14.2
Installed RandomNumbers ─────────── v1.3.0
Installed FillArrays ────────────── v0.8.2
Installed NNlib ─────────────────── v0.6.0
Installed DiffEqBiological ──────── v4.1.0
Installed DynamicPolynomials ────── v0.3.4
Installed Crayons ───────────────── v4.0.1
Installed SpecialFunctions ──────── v0.9.0
Installed HomotopyContinuation ──── v1.3.1
Installed GenericSVD ────────────── v0.2.2
Installed MultivariatePolynomials ─ v0.3.4
Installed Quadmath ──────────────── v0.5.2
Installed Polynomials ───────────── v0.6.0
Installed MixedSubdivisions ─────── v1.0.0
Installed LaTeXStrings ──────────── v1.0.3
Installed DataValueInterfaces ───── v1.0.0
Installed DoubleFloats ──────────── v1.0.3
Installed ModelingToolkit ───────── v1.0.3
Installed LazyArrays ────────────── v0.14.10
Installed GeneralizedGenerated ──── v0.2.0
Installed BlockBandedMatrices ───── v0.6.0
Installed Tables ────────────────── v0.2.11
Installed CommonSubexpressions ──── v0.2.0
Installed TimerOutputs ──────────── v0.5.3
Installed PoissonRandom ─────────── v0.4.0
Installed ProjectiveVectors ─────── v1.1.2
Installed MutableArithmetics ────── v0.1.1
Installed PrettyPrint ───────────── v0.1.0
Installed MLStyle ───────────────── v0.3.1
Installed ArrayLayouts ──────────── v0.1.5
Installed JuliaVariables ────────── v0.2.0
Installed PrettyTables ──────────── v0.6.0
Installed NaNMath ───────────────── v0.3.3
Installed SymEngine ─────────────── v0.7.0
Installed BlockArrays ───────────── v0.10.2
Installed MatrixFactorizations ──── v0.2.1
Installed CanonicalTraits ───────── v0.1.0
Installed GenericSchur ──────────── v0.3.0
Installed ProgressMeter ─────────── v1.2.0
Installed StaticPolynomials ─────── v1.3.3
Updating `/tmp/jl_J7p3WN/Project.toml`
[9fdde737] + DiffEqOperators v4.6.0
[a077e3f3] + DiffEqProblemLibrary v4.6.4
[f6369f11] + ForwardDiff v0.10.8
[c3572dad] + Sundials v3.8.1 [`~/.julia/packages/Sundials/MllUG`]
Updating `/tmp/jl_J7p3WN/Manifest.toml`
[4c555306] + ArrayLayouts v0.1.5
[aae01518] + BandedMatrices v0.14.2
[8e7c35d0] + BlockArrays v0.10.2
[ffab5731] + BlockBandedMatrices v0.6.0
[a603d957] + CanonicalTraits v0.1.0
[bbf7d656] + CommonSubexpressions v0.2.0
[a8cc5b0e] + Crayons v4.0.1
[9a962f9c] + DataAPI v1.1.0
[e2d170a0] + DataValueInterfaces v1.0.0
[eb300fae] + DiffEqBiological v4.1.0
[c894b116] + DiffEqJump v6.4.0
[9fdde737] + DiffEqOperators v4.6.0
[a077e3f3] + DiffEqProblemLibrary v4.6.4
[163ba53b] + DiffResults v1.0.1
[b552c78f] + DiffRules v0.1.0
[497a8b3b] + DoubleFloats v1.0.3
[7c1d4256] + DynamicPolynomials v0.3.4
[fdbdab4c] + ElasticArrays v1.0.0
[1a297f60] + FillArrays v0.8.2
[3dd14ad9] + FixedPolynomials v0.4.0
[59287772] + Formatting v0.4.1
[f6369f11] + ForwardDiff v0.10.8
[6b9d7cbe] + GeneralizedGenerated v0.2.0
[01680d73] + GenericSVD v0.2.2
[c145ed77] + GenericSchur v0.3.0
[f213a82b] + HomotopyContinuation v1.3.1
[b14d175d] + JuliaVariables v0.2.0
[b964fa9f] + LaTeXStrings v1.0.3
[23fbe1c1] + Latexify v0.12.3
[5078a376] + LazyArrays v0.14.10
[d8e11817] + MLStyle v0.3.1
[a3b82374] + MatrixFactorizations v0.2.1
[291d046c] + MixedSubdivisions v1.0.0
[961ee093] + ModelingToolkit v1.0.3
[102ac46a] + MultivariatePolynomials v0.3.4
[d8a4904e] + MutableArithmetics v0.1.1
[872c559c] + NNlib v0.6.0
[77ba4419] + NaNMath v0.3.3
[71a1bf82] + NameResolution v0.1.3
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[e409e4f3] + PoissonRandom v0.4.0
[f27b6e38] + Polynomials v0.6.0
[8162dcfd] + PrettyPrint v0.1.0
[08abe8d2] + PrettyTables v0.6.0
[92933f4c] + ProgressMeter v1.2.0
[01f381cc] + ProjectiveVectors v1.1.2
[be4d8f0f] + Quadmath v0.5.2
[e6cf234a] + RandomNumbers v1.3.0
[276daf66] + SpecialFunctions v0.9.0
[62e018b1] + StaticPolynomials v1.3.3
[c3572dad] ~ Sundials v3.8.1 ⇒ v3.8.1 [`~/.julia/packages/Sundials/MllUG`]
[123dc426] + SymEngine v0.7.0
[bd369af6] + Tables v0.2.11
[a759f4b9] + TimerOutputs v0.5.3
[9fa8497b] + Future
Building SymEngine → `~/.julia/packages/SymEngine/zSUGO/deps/build.log`
Path `/home/pkgeval/.julia/packages/SymEngine/zSUGO` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_vFcUhL/Project.toml`
[123dc426] + SymEngine v0.7.0 [`~/.julia/packages/SymEngine/zSUGO`]
Updating `/tmp/jl_vFcUhL/Manifest.toml`
[123dc426] ~ SymEngine v0.7.0 ⇒ v0.7.0 [`~/.julia/packages/SymEngine/zSUGO`]
Running sandbox
Status `/tmp/jl_J7p3WN/Project.toml`
[b99e7846] BinaryProvider v0.5.8
[34da2185] Compat v2.2.0
[864edb3b] DataStructures v0.17.6
[2b5f629d] DiffEqBase v6.9.4
[9fdde737] DiffEqOperators v4.6.0
[a077e3f3] DiffEqProblemLibrary v4.6.4
[f6369f11] ForwardDiff v0.10.8
[189a3867] Reexport v0.2.0
[c3572dad] Sundials v3.8.1 [`~/.julia/packages/Sundials/MllUG`]
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[2f01184e] SparseArrays
[4607b0f0] SuiteSparse
[8dfed614] Test
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, AbstractArray{T, 2} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/generic.jl:247 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:6.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, LinearAlgebra.Diagonal{T, V} where V<:AbstractArray{T, 1} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/diagonal.jl:430 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:7.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, LinearAlgebra.Diagonal{T, V} where V<:AbstractArray{T, 1} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/diagonal.jl:430 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:7.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, AbstractArray{T, 2} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/generic.jl:247 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:6.
** incremental compilation may be fatally broken for this module **
T=0.4, Y=[0.9899652943580929, 3.470564190666435e-5, 0.01]
roots=Int32[0, 1]
T=0.4, Y=[0.9851640906722351, 3.386241699325715e-5, 0.014802046910771114]
T=4.0, Y=[0.905509670307843, 2.2403378846050117e-5, 0.09446792631331014]
T=40.0, Y=[0.7158015797469233, 9.185043328931088e-6, 0.28418923520974726]
T=400.0, Y=[0.450520872333455, 3.2228257877077353e-6, 0.5494759048407565]
T=4000.0, Y=[0.18322169164077126, 8.943516144954548e-7, 0.8167774140076135]
T=40000.0, Y=[0.03898091132304715, 1.6216688934655267e-7, 0.9610189265100634]
T=400000.0, Y=[0.004936971391576565, 1.9844502466172285e-8, 0.9950630087639206]
T=4.0e6, Y=[0.000517010320204611, 2.0690977989759934e-9, 0.9994829876106978]
T=4.0e7, Y=[9.999999999999992e-5, 4.00039528747344e-10, 0.9998999995999602]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204926760391501e-5, 2.0820776359257418e-10, 0.9999479505241882]
T=4.0e8, Y=[5.1849463049478235e-6, 2.0739891508302815e-11, 0.9999948150329551]
T=4.0e9, Y=[5.246211769412839e-7, 2.0984858346733178e-12, 0.9999994753767246]
T=4.0e10, Y=[6.043455470531721e-8, 2.41738235380483e-13, 0.9999999395652039]
Test Summary: |
CVODE | No tests
T=0.4, Y=[0.9851721138377025, 3.386406120817996e-5, 0.014794022101089307]
T=4.0, Y=[0.9055186785328794, 2.2404781805334787e-5, 0.09445891668531428]
T=40.0, Y=[0.715827068739702, 9.185512472082487e-6, 0.28416374574782616]
T=400.0, Y=[0.45051866843284366, 3.222907159344263e-6, 0.5494781086599967]
T=4000.0, Y=[0.18320225667994575, 8.94230214472978e-7, 0.8167968490898406]
T=40000.0, Y=[0.03898337827880326, 1.621799878073902e-7, 0.96101645954121]
T=400000.0, Y=[0.004938270331418616, 1.985351550862375e-8, 0.9950617098150669]
T=4.0e6, Y=[0.0005168101324260045, 2.068434777531092e-9, 0.9994831877991401]
T=4.0e7, Y=[5.202985953290682e-5, 2.0832525035625152e-10, 0.9999479699321431]
T=4.0e8, Y=[5.207659630111956e-6, 2.0841931899519505e-11, 0.9999947923195291]
T=4.0e9, Y=[5.208321136050987e-7, 2.0828928173656967e-12, 0.9999994791658047]
T=4.0e10, Y=[5.208358902243623e-8, 1.977013868181389e-13, 0.999999947916214]
Test Summary: |
ARK | No tests
T=0.4, Y=[0.9899652943718806, 3.4705628119662186e-5, 0.010000000000000002]
roots=Int32[0, 1]
T=0.4, Y=[0.9851707623122912, 3.386371656828505e-5, 0.01479537397114059]
T=4.0, Y=[0.905504728443, 2.24030741323827e-5, 0.09447286848286832]
T=40.0, Y=[0.71584189841088, 9.186119502141643e-6, 0.28414891546961785]
T=400.0, Y=[0.450537891284184, 3.2231511100140762e-6, 0.5494588855647063]
T=4000.0, Y=[0.1831996994939642, 8.942143972145097e-7, 0.8167994062916398]
T=40000.0, Y=[0.03898368270471694, 1.6217829385564226e-7, 0.9610161551169892]
T=400000.0, Y=[0.004938675705721228, 1.985155431045523e-8, 0.995061304442724]
T=4.0e6, Y=[0.00051688824532254, 2.0686115064950218e-9, 0.9994831096860671]
T=4.0e7, Y=[9.999999999999957e-5, 4.0003952202291907e-10, 0.9998999995999608]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204772673760556e-5, 2.0820161918090773e-10, 0.9999479520650573]
T=4.0e8, Y=[5.205357160339493e-6, 2.0821535764088784e-11, 0.9999947946220178]
T=4.0e9, Y=[5.190800205273695e-7, 2.076321146499096e-12, 0.9999994809179031]
T=4.0e10, Y=[5.11777367290652e-8, 2.047109574722673e-13, 0.9999999488220584]
Test Summary: |
IDA | No tests
Solution: [0.7861540663366059, 0.6180344478352109]
Residual: [4.794728554635697e-6, -3.7681823696900096e-6]
Test Summary: | Pass Total
Kinsol | 2 2
Test Summary: | Pass Total
Handle Tests | 13 13
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, LinearAlgebra.Diagonal{T, V} where V<:AbstractArray{T, 1} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/diagonal.jl:430 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:7.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, AbstractArray{T, 2} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/generic.jl:247 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:6.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, LinearAlgebra.Diagonal{T, V} where V<:AbstractArray{T, 1} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/diagonal.jl:430 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:7.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition ldiv!(AbstractArray{T, N} where N where T, AbstractArray{T, 2} where T, AbstractArray{T, N} where N where T) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.4/LinearAlgebra/src/generic.jl:247 overwritten in module DiffEqBase at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/init.jl:6.
** incremental compilation may be fatally broken for this module **
┌ Warning: Replacing docs for `DiffEqOperators.PeriodicBC :: Union{}` in module `DiffEqOperators`
└ @ Base.Docs docs/Docs.jl:229
┌ Warning: Replacing docs for `DiffEqOperators.RobinBC :: Union{}` in module `DiffEqOperators`
└ @ Base.Docs docs/Docs.jl:229
[IDAS ERROR] IDASolve
At t = 0.0395936 and h = 6.30116e-16, the corrector convergence failed repeatedly or with |h| = hmin.
[IDAS ERROR] IDASolve
At t = 0.0317944 and h = 3.07674e-19, the corrector convergence failed repeatedly or with |h| = hmin.
With consistent initial conditions:
With inconsistent initial conditions:
Jacobians: Error During Test at /home/pkgeval/.julia/packages/Sundials/MllUG/test/runtests.jl:29
Got exception outside of a @test
LoadError: ArgumentError: 1 == colptr[1] != 1
Stacktrace:
[1] sparse_check(::Int64, ::Array{Int64,1}, ::Array{Int64,1}, ::Array{Float64,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/SparseArrays/src/sparsematrix.jl:58
[2] SparseMatrixCSC(::Int64, ::Int64, ::Array{Int64,1}, ::Array{Int64,1}, ::Array{Float64,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/SparseArrays/src/sparsematrix.jl:39
[3] convert(::Type{SparseMatrixCSC}, ::Ptr{Sundials._generic_SUNMatrix}) at /home/pkgeval/.julia/packages/Sundials/MllUG/src/types_and_consts_additions.jl:49
[4] cvodejac(::Float64, ::Ptr{Sundials._generic_N_Vector}, ::Ptr{Sundials._generic_N_Vector}, ::Ptr{Sundials._generic_SUNMatrix}, ::Sundials.FunJac{ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Nothing,typeof(Lotka_jac),DiffEqBase.NullParameters,Nothing,SparseMatrixCSC{Float64,Int64},Array{Float64,1},Nothing,Nothing,Nothing}, ::Ptr{Sundials._generic_N_Vector}, ::Ptr{Sundials._generic_N_Vector}, ::Ptr{Sundials._generic_N_Vector}) at /home/pkgeval/.julia/packages/Sundials/MllUG/src/common_interface/function_types.jl:66
[5] __CVode at /home/pkgeval/.julia/packages/Sundials/MllUG/src/wrapped_api/cvodes.jl:312 [inlined]
[6] CVode(::Sundials.Handle{Sundials.CVODEMem}, ::Float64, ::Array{Float64,1}, ::Array{Float64,1}, ::Int32) at /home/pkgeval/.julia/packages/Sundials/MllUG/src/wrapped_api/cvodes.jl:317
[7] solver_step(::Sundials.CVODEIntegrator{Array{Float64,1},DiffEqBase.NullParameters,Sundials.Handle{Sundials.CVODEMem},ODESolution{Float64,2,Array{Array{Float64,1},1},Nothing,Nothing,Array{Float64,1},Nothing,ODEProblem{Array{Float64,1},Tuple{Float64,Float64},true,DiffEqBase.NullParameters,ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}},DiffEqBase.StandardODEProblem},CVODE_BDF{:Newton,:KLU,Nothing,Nothing},DiffEqBase.HermiteInterpolation{Array{Float64,1},Array{Array{Float64,1},1},Array{Array{Float64,1},1}},DiffEqBase.DEStats},CVODE_BDF{:Newton,:KLU,Nothing,Nothing},ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Sundials.FunJac{ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Nothing,typeof(Lotka_jac),DiffEqBase.NullParameters,Nothing,SparseMatrixCSC{Float64,Int64},Array{Float64,1},Nothing,Nothing,Nothing},Ptr{Nothing},Sundials.DEOptions{DataStructures.BinaryHeap{Float64,DataStructures.LessThan},DataStructures.BinaryHeap{Float64,DataStructures.LessThan},CallbackSet{Tuple{},Tuple{}},Float64,Float64,typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)},Array{Float64,1},Tuple{Int64},Array{Float64,1},Sundials.LinSolHandle{Sundials.KLU},Sundials.MatrixHandle{Sundials.SparseMatrix},Nothing}, ::Float64) at /home/pkgeval/.julia/packages/Sundials/MllUG/src/common_interface/solve.jl:1091
[8] solve!(::Sundials.CVODEIntegrator{Array{Float64,1},DiffEqBase.NullParameters,Sundials.Handle{Sundials.CVODEMem},ODESolution{Float64,2,Array{Array{Float64,1},1},Nothing,Nothing,Array{Float64,1},Nothing,ODEProblem{Array{Float64,1},Tuple{Float64,Float64},true,DiffEqBase.NullParameters,ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}},DiffEqBase.StandardODEProblem},CVODE_BDF{:Newton,:KLU,Nothing,Nothing},DiffEqBase.HermiteInterpolation{Array{Float64,1},Array{Array{Float64,1},1},Array{Array{Float64,1},1}},DiffEqBase.DEStats},CVODE_BDF{:Newton,:KLU,Nothing,Nothing},ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Sundials.FunJac{ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Nothing,typeof(Lotka_jac),DiffEqBase.NullParameters,Nothing,SparseMatrixCSC{Float64,Int64},Array{Float64,1},Nothing,Nothing,Nothing},Ptr{Nothing},Sundials.DEOptions{DataStructures.BinaryHeap{Float64,DataStructures.LessThan},DataStructures.BinaryHeap{Float64,DataStructures.LessThan},CallbackSet{Tuple{},Tuple{}},Float64,Float64,typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)},Array{Float64,1},Tuple{Int64},Array{Float64,1},Sundials.LinSolHandle{Sundials.KLU},Sundials.MatrixHandle{Sundials.SparseMatrix},Nothing}) at /home/pkgeval/.julia/packages/Sundials/MllUG/src/common_interface/solve.jl:1145
[9] __solve(::ODEProblem{Array{Float64,1},Tuple{Float64,Float64},true,DiffEqBase.NullParameters,ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}},DiffEqBase.StandardODEProblem}, ::CVODE_BDF{:Newton,:KLU,Nothing,Nothing}, ::Array{Any,1}, ::Array{Any,1}, ::Array{Any,1}, ::Type{Val{true}}; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /home/pkgeval/.julia/packages/Sundials/MllUG/src/common_interface/solve.jl:12
[10] solve_call(::ODEProblem{Array{Float64,1},Tuple{Float64,Float64},true,DiffEqBase.NullParameters,ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}},DiffEqBase.StandardODEProblem}, ::CVODE_BDF{:Newton,:KLU,Nothing,Nothing}; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/solve.jl:0
[11] solve_call at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/solve.jl:37 [inlined]
[12] #solve#441 at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/solve.jl:57 [inlined]
[13] solve(::ODEProblem{Array{Float64,1},Tuple{Float64,Float64},true,DiffEqBase.NullParameters,ODEFunction{true,typeof(Lotka),LinearAlgebra.UniformScaling{Bool},Nothing,Nothing,typeof(Lotka_jac),SparseMatrixCSC{Float64,Int64},Nothing,Nothing,Nothing,Nothing,Nothing},Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}},DiffEqBase.StandardODEProblem}, ::CVODE_BDF{:Newton,:KLU,Nothing,Nothing}) at /home/pkgeval/.julia/packages/DiffEqBase/runpo/src/solve.jl:45
[14] top-level scope at /home/pkgeval/.julia/packages/Sundials/MllUG/test/common_interface/jacobians.jl:31
[15] include(::String) at ./client.jl:439
[16] macro expansion at /home/pkgeval/.julia/packages/Sundials/MllUG/test/runtests.jl:29 [inlined]
[17] macro expansion at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Test/src/Test.jl:1116 [inlined]
[18] macro expansion at /home/pkgeval/.julia/packages/Sundials/MllUG/test/runtests.jl:29 [inlined]
[19] macro expansion at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Test/src/Test.jl:1116 [inlined]
[20] top-level scope at /home/pkgeval/.julia/packages/Sundials/MllUG/test/runtests.jl:26
[21] include(::String) at ./client.jl:439
[22] top-level scope at none:6
[23] eval(::Module, ::Any) at ./boot.jl:331
[24] exec_options(::Base.JLOptions) at ./client.jl:264
[25] _start() at ./client.jl:484
in expression starting at /home/pkgeval/.julia/packages/Sundials/MllUG/test/common_interface/jacobians.jl:31
i.t = 0.04436589458068945
i.t = 0.11976370878673312
i.t = 0.19516152299277678
i.t = 0.27055933719882047
i.t = 0.34595715140486416
i.t = 0.42135496561090785
i.t = 0.5878600458168253
i.t = 0.7543651260227427
i.t = 0.9208702062286602
i.t = 1.0
Test error handling
[CVODES WARNING] CVode
Internal t = 0 and h = 0 are such that t + h = t on the next step. The solver will continue anyway.
[CVODES ERROR] CVode
At t = 0 and h = 0, the corrector convergence test failed repeatedly or with |h| = hmin.
[IDAS ERROR] IDACalcIC
Newton/Linesearch algorithm failed to converge.
Test Summary: | Pass Error Total
Common Interface | 40 1 41
CVODE | 23 23
ARKODE | 3 3
IDA | 7 7
Jacobians | 1 1 2
Callbacks | 4 4
Iterator | No tests
Errors | 1 1
Mass Matrix | 1 1
ERROR: LoadError: Some tests did not pass: 40 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/Sundials/MllUG/test/runtests.jl:25
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/Sundials/MllUG/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/Sundials/MllUG/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package Sundials errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Operations.jl:1475
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:300
[5] #test#66 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[11] top-level scope at none:12