-
Notifications
You must be signed in to change notification settings - Fork 5
/
1.4.0-DEV-efa66facf6.log
172 lines (162 loc) · 8.95 KB
/
1.4.0-DEV-efa66facf6.log
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
Julia Version 1.4.0-DEV.648
Commit efa66facf6 (2019-12-19 21:21 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed LinearDynamicsModels ─────── v1.0.1
Installed Requires ─────────────────── v1.0.0
Installed DiffResults ──────────────── v1.0.1
Installed OrderedCollections ───────── v1.1.0
Installed StaticArrays ─────────────── v0.12.1
Installed DataStructures ───────────── v0.17.6
Installed DiffRules ────────────────── v1.0.0
Installed ForwardDiff ──────────────── v0.10.8
Installed NaNMath ──────────────────── v0.3.3
Installed CommonSubexpressions ─────── v0.2.0
Installed DifferentialDynamicsModels ─ v1.0.1
Installed SpecialFunctions ─────────── v0.9.0
Installed MacroTools ───────────────── v0.5.3
Installed OpenSpecFun_jll ──────────── v0.5.3+1
Updating `~/.julia/environments/v1.4/Project.toml`
[93c30095] + LinearDynamicsModels v1.0.1
Updating `~/.julia/environments/v1.4/Manifest.toml`
[bbf7d656] + CommonSubexpressions v0.2.0
[864edb3b] + DataStructures v0.17.6
[163ba53b] + DiffResults v1.0.1
[b552c78f] + DiffRules v1.0.0
[cb52cc87] + DifferentialDynamicsModels v1.0.1
[f6369f11] + ForwardDiff v0.10.8
[93c30095] + LinearDynamicsModels v1.0.1
[1914dd2f] + MacroTools v0.5.3
[77ba4419] + NaNMath v0.3.3
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[ae029012] + Requires v1.0.0
[276daf66] + SpecialFunctions v0.9.0
[90137ffa] + StaticArrays v0.12.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing LinearDynamicsModels
Path `/home/pkgeval/.julia/packages/LinearDynamicsModels/zCSBW` exists and looks like the correct package. Using existing path.
Installed Conda ────────── v1.3.0
Installed VersionParsing ─ v1.2.0
Installed JSON ─────────── v0.21.0
Installed RecipesBase ──── v0.7.0
Installed Parsers ──────── v0.3.10
Installed SymPy ────────── v1.0.10
Installed PyCall ───────── v1.91.2
Updating `/tmp/jl_AA7SlL/Project.toml`
[93c30095] + LinearDynamicsModels v1.0.1 [`~/.julia/packages/LinearDynamicsModels/zCSBW`]
[24249f21] + SymPy v1.0.10
Updating `/tmp/jl_AA7SlL/Manifest.toml`
[8f4d0f93] + Conda v1.3.0
[682c06a0] + JSON v0.21.0
[93c30095] ~ LinearDynamicsModels v1.0.1 ⇒ v1.0.1 [`~/.julia/packages/LinearDynamicsModels/zCSBW`]
[69de0a69] + Parsers v0.3.10
[438e738f] + PyCall v1.91.2
[3cdcf5f2] + RecipesBase v0.7.0
[24249f21] + SymPy v1.0.10
[81def892] + VersionParsing v1.2.0
[a63ad114] + Mmap
Building Conda ─→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Path `/home/pkgeval/.julia/packages/Conda/kLXeC` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_gKnkVP/Project.toml`
[8f4d0f93] + Conda v1.3.0 [`~/.julia/packages/Conda/kLXeC`]
Updating `/tmp/jl_gKnkVP/Manifest.toml`
[8f4d0f93] ~ Conda v1.3.0 ⇒ v1.3.0 [`~/.julia/packages/Conda/kLXeC`]
Building PyCall → `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Path `/home/pkgeval/.julia/packages/PyCall/ttONZ` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_fnVpuy/Project.toml`
[438e738f] + PyCall v1.91.2 [`~/.julia/packages/PyCall/ttONZ`]
Updating `/tmp/jl_fnVpuy/Manifest.toml`
[438e738f] ~ PyCall v1.91.2 ⇒ v1.91.2 [`~/.julia/packages/PyCall/ttONZ`]
Running sandbox
Status `/tmp/jl_AA7SlL/Project.toml`
[cb52cc87] DifferentialDynamicsModels v1.0.1
[f6369f11] ForwardDiff v0.10.8
[93c30095] LinearDynamicsModels v1.0.1 [`~/.julia/packages/LinearDynamicsModels/zCSBW`]
[1914dd2f] MacroTools v0.5.3
[ae029012] Requires v1.0.0
[90137ffa] StaticArrays v0.12.1
[24249f21] SymPy v1.0.10
[37e2e46d] LinearAlgebra
[8dfed614] Test
ERROR: LoadError: InitError: PyError (PyImport_ImportModule
The Python package sympy could not be found by pyimport. Usually this means
that you did not install sympy in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the sympy module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the sympy module, you can use `pyimport_conda("sympy", PKG)`,
where PKG is the Anaconda package the contains the module sympy,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'sympy'",)
Stacktrace:
[1] pyimport(::String) at /home/pkgeval/.julia/packages/PyCall/ttONZ/src/PyCall.jl:544
[2] pyimport_conda(::String, ::String, ::String) at /home/pkgeval/.julia/packages/PyCall/ttONZ/src/PyCall.jl:702
[3] pyimport_conda at /home/pkgeval/.julia/packages/PyCall/ttONZ/src/PyCall.jl:701 [inlined]
[4] __init__() at /home/pkgeval/.julia/packages/SymPy/Xp6GQ/src/SymPy.jl:99
[5] _include_from_serialized(::String, ::Array{Any,1}) at ./loading.jl:697
[6] _require_from_serialized(::String) at ./loading.jl:748
[7] _require(::Base.PkgId) at ./loading.jl:1039
[8] require(::Base.PkgId) at ./loading.jl:927
[9] require(::Module, ::Symbol) at ./loading.jl:922
[10] include(::String) at ./client.jl:439
[11] top-level scope at none:6
during initialization of module SymPy
in expression starting at /home/pkgeval/.julia/packages/LinearDynamicsModels/zCSBW/test/runtests.jl:24
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/LinearDynamicsModels/zCSBW/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/LinearDynamicsModels/zCSBW/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package LinearDynamicsModels errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Operations.jl:1475
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:300
[5] #test#66 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[11] top-level scope at none:12