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1.4.0-DEV-81899bf99e.log
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Julia Version 1.4.0-DEV.634
Commit 81899bf99e (2019-12-18 10:13 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed PDMats ────────────────────── v0.9.10
Installed OpenSpecFun_jll ───────────── v0.5.3+1
Installed Missings ──────────────────── v0.4.3
Installed OrderedCollections ────────── v1.1.0
Installed StatsBase ─────────────────── v0.32.0
Installed GLM ───────────────────────── v1.3.5
Installed LatinHypercubeSampling ────── v1.4.0
Installed Surrogates ────────────────── v1.0.1
Installed Rmath ─────────────────────── v0.6.0
Installed Tables ────────────────────── v0.2.11
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed FillArrays ────────────────── v0.8.2
Installed StatsFuns ─────────────────── v0.9.3
Installed ShiftedArrays ─────────────── v1.0.0
Installed Reexport ──────────────────── v0.2.0
Installed QuadGK ────────────────────── v2.3.1
Installed DataAPI ───────────────────── v1.1.0
Installed Requires ──────────────────── v1.0.0
Installed DataStructures ────────────── v0.17.6
Installed Arpack_jll ────────────────── v3.5.0+2
Installed SortingAlgorithms ─────────── v0.3.1
Installed StatsModels ───────────────── v0.6.7
Installed BinaryProvider ────────────── v0.5.8
Installed Distributions ─────────────── v0.21.11
Installed OpenBLAS_jll ──────────────── v0.3.7+1
Installed Arpack ────────────────────── v0.4.0
Installed SpecialFunctions ──────────── v0.9.0
Installed DataValueInterfaces ───────── v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed Sobol ─────────────────────── v1.3.0
Updating `~/.julia/environments/v1.4/Project.toml`
[6fc51010] + Surrogates v1.0.1
Updating `~/.julia/environments/v1.4/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[b99e7846] + BinaryProvider v0.5.8
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[31c24e10] + Distributions v0.21.11
[1a297f60] + FillArrays v0.8.2
[38e38edf] + GLM v1.3.5
[82899510] + IteratorInterfaceExtensions v1.0.0
[a5e1c1ea] + LatinHypercubeSampling v1.4.0
[e1d29d7a] + Missings v0.4.3
[4536629a] + OpenBLAS_jll v0.3.7+1
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[1fd47b50] + QuadGK v2.3.1
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.0
[79098fc4] + Rmath v0.6.0
[1277b4bf] + ShiftedArrays v1.0.0
[ed01d8cd] + Sobol v1.3.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.3
[3eaba693] + StatsModels v0.6.7
[6fc51010] + Surrogates v1.0.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath → `~/.julia/packages/Rmath/BoBag/deps/build.log`
Path `/home/pkgeval/.julia/packages/Rmath/BoBag` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_GbJjR0/Project.toml`
[79098fc4] + Rmath v0.6.0 [`~/.julia/packages/Rmath/BoBag`]
Updating `/tmp/jl_GbJjR0/Manifest.toml`
[79098fc4] ~ Rmath v0.6.0 ⇒ v0.6.0 [`~/.julia/packages/Rmath/BoBag`]
Testing Surrogates
Path `/home/pkgeval/.julia/packages/Surrogates/dfpEW` exists and looks like the correct package. Using existing path.
Installed Flux ───────────────── v0.8.3
Installed ForwardDiff ────────── v0.10.8
Installed Tracker ────────────── v0.2.3
Installed Cubature ───────────── v1.4.1
Installed BlockArrays ────────── v0.10.2
Installed Zygote ─────────────── v0.3.4
Installed Stheno ─────────────── v0.4.2
Installed MKL_jll ────────────── v2019.0.117+0
Installed FFTW_jll ───────────── v3.3.9+3
Installed XGBoost ────────────── v0.4.2
Installed CommonSubexpressions ─ v0.2.0
Installed TranscodingStreams ─── v0.9.5
Installed RecipesBase ────────── v0.7.0
Installed AbstractFFTs ───────── v0.5.0
Installed ColorTypes ─────────── v0.9.0
Installed DiffResults ────────── v1.0.1
Installed CodecZlib ──────────── v0.6.0
Installed Distances ──────────── v0.8.2
Installed FixedPointNumbers ──── v0.7.0
Installed Media ──────────────── v0.5.0
Installed AbstractTrees ──────── v0.2.1
Installed MacroTools ─────────── v0.5.3
Installed Adapt ──────────────── v1.0.0
Installed IntelOpenMP_jll ────── v2018.0.3+0
Installed Colors ─────────────── v0.11.0
Installed ZipFile ────────────── v0.8.3
Installed TimerOutputs ───────── v0.5.3
Installed NNlib ──────────────── v0.6.0
Installed Juno ───────────────── v0.7.2
Installed IRTools ────────────── v0.2.3
Installed NaNMath ────────────── v0.3.3
Installed DiffRules ──────────── v1.0.0
Installed ZygoteRules ────────── v0.1.0
Installed StaticArrays ───────── v0.12.1
Installed FFTW ───────────────── v1.2.0
Updating `/tmp/jl_VwAbX4/Project.toml`
[667455a9] + Cubature v1.4.1
[587475ba] + Flux v0.8.3
[f6369f11] + ForwardDiff v0.10.8
[8188c328] + Stheno v0.4.2
[6fc51010] + Surrogates v1.0.1 [`~/.julia/packages/Surrogates/dfpEW`]
[9f7883ad] + Tracker v0.2.3
[009559a3] + XGBoost v0.4.2
[e88e6eb3] + Zygote v0.3.4
Updating `/tmp/jl_VwAbX4/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[1520ce14] + AbstractTrees v0.2.1
[79e6a3ab] + Adapt v1.0.0
[8e7c35d0] + BlockArrays v0.10.2
[944b1d66] + CodecZlib v0.6.0
[3da002f7] + ColorTypes v0.9.0
[5ae59095] + Colors v0.11.0
[bbf7d656] + CommonSubexpressions v0.2.0
[667455a9] + Cubature v1.4.1
[163ba53b] + DiffResults v1.0.1
[b552c78f] + DiffRules v1.0.0
[b4f34e82] + Distances v0.8.2
[7a1cc6ca] + FFTW v1.2.0
[f5851436] + FFTW_jll v3.3.9+3
[53c48c17] + FixedPointNumbers v0.7.0
[587475ba] + Flux v0.8.3
[f6369f11] + ForwardDiff v0.10.8
[7869d1d1] + IRTools v0.2.3
[1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
[e5e0dc1b] + Juno v0.7.2
[856f044c] + MKL_jll v2019.0.117+0
[1914dd2f] + MacroTools v0.5.3
[e89f7d12] + Media v0.5.0
[872c559c] + NNlib v0.6.0
[77ba4419] + NaNMath v0.3.3
[3cdcf5f2] + RecipesBase v0.7.0
[90137ffa] + StaticArrays v0.12.1
[8188c328] + Stheno v0.4.2
[6fc51010] ~ Surrogates v1.0.1 ⇒ v1.0.1 [`~/.julia/packages/Surrogates/dfpEW`]
[a759f4b9] + TimerOutputs v0.5.3
[9f7883ad] + Tracker v0.2.3
[3bb67fe8] + TranscodingStreams v0.9.5
[009559a3] + XGBoost v0.4.2
[a5390f91] + ZipFile v0.8.3
[e88e6eb3] + Zygote v0.3.4
[700de1a5] + ZygoteRules v0.1.0
[8bb1440f] + DelimitedFiles
[a63ad114] + Mmap
[9abbd945] + Profile
Building Cubature ─→ `~/.julia/packages/Cubature/GQTey/deps/build.log`
Path `/home/pkgeval/.julia/packages/Cubature/GQTey` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_nHSn6S/Project.toml`
[667455a9] + Cubature v1.4.1 [`~/.julia/packages/Cubature/GQTey`]
Updating `/tmp/jl_nHSn6S/Manifest.toml`
[667455a9] ~ Cubature v1.4.1 ⇒ v1.4.1 [`~/.julia/packages/Cubature/GQTey`]
Building XGBoost ──→ `~/.julia/packages/XGBoost/LXjD0/deps/build.log`
Path `/home/pkgeval/.julia/packages/XGBoost/LXjD0` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_c78PIM/Project.toml`
[009559a3] + XGBoost v0.4.2 [`~/.julia/packages/XGBoost/LXjD0`]
Updating `/tmp/jl_c78PIM/Manifest.toml`
[009559a3] ~ XGBoost v0.4.2 ⇒ v0.4.2 [`~/.julia/packages/XGBoost/LXjD0`]
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Path `/home/pkgeval/.julia/packages/CodecZlib/5t9zO` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_lkP4uT/Project.toml`
[944b1d66] + CodecZlib v0.6.0 [`~/.julia/packages/CodecZlib/5t9zO`]
Updating `/tmp/jl_lkP4uT/Manifest.toml`
[944b1d66] ~ CodecZlib v0.6.0 ⇒ v0.6.0 [`~/.julia/packages/CodecZlib/5t9zO`]
Building ZipFile ──→ `~/.julia/packages/ZipFile/oD4uG/deps/build.log`
Path `/home/pkgeval/.julia/packages/ZipFile/oD4uG` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_oZOwLh/Project.toml`
[a5390f91] + ZipFile v0.8.3 [`~/.julia/packages/ZipFile/oD4uG`]
Updating `/tmp/jl_oZOwLh/Manifest.toml`
[a5390f91] ~ ZipFile v0.8.3 ⇒ v0.8.3 [`~/.julia/packages/ZipFile/oD4uG`]
Building FFTW ─────→ `~/.julia/packages/FFTW/qqcBj/deps/build.log`
Path `/home/pkgeval/.julia/packages/FFTW/qqcBj` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_bv20tT/Project.toml`
[7a1cc6ca] + FFTW v1.2.0 [`~/.julia/packages/FFTW/qqcBj`]
Updating `/tmp/jl_bv20tT/Manifest.toml`
[7a1cc6ca] ~ FFTW v1.2.0 ⇒ v1.2.0 [`~/.julia/packages/FFTW/qqcBj`]
Running sandbox
Status `/tmp/jl_VwAbX4/Project.toml`
[667455a9] Cubature v1.4.1
[31c24e10] Distributions v0.21.11
[587475ba] Flux v0.8.3
[f6369f11] ForwardDiff v0.10.8
[38e38edf] GLM v1.3.5
[a5e1c1ea] LatinHypercubeSampling v1.4.0
[1fd47b50] QuadGK v2.3.1
[ae029012] Requires v1.0.0
[ed01d8cd] Sobol v1.3.0
[8188c328] Stheno v0.4.2
[6fc51010] Surrogates v1.0.1 [`~/.julia/packages/Surrogates/dfpEW`]
[9f7883ad] Tracker v0.2.3
[009559a3] XGBoost v0.4.2
[e88e6eb3] Zygote v0.3.4
[37e2e46d] LinearAlgebra
[8dfed614] Test
Test Summary: | Pass Total
Radials.jl | 12 12
Test Summary: | Pass Total
Kriging.jl | 5 5
Test Summary: | Pass Total
Sampling | 7 7
ERROR: LoadError: LoadError: UndefVarError: Printf not defined
Stacktrace:
[1] getproperty(::Module, ::Symbol) at ./Base.jl:26
[2] top-level scope at /home/pkgeval/.julia/packages/Tracker/SAr25/src/lib/real.jl:57
[3] include(::Module, ::String) at ./Base.jl:377
[4] include(::String) at /home/pkgeval/.julia/packages/Tracker/SAr25/src/Tracker.jl:1
[5] top-level scope at /home/pkgeval/.julia/packages/Tracker/SAr25/src/Tracker.jl:68
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/Tracker/SAr25/src/lib/real.jl:57
in expression starting at /home/pkgeval/.julia/packages/Tracker/SAr25/src/Tracker.jl:68
ERROR: LoadError: Failed to precompile Tracker [9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c] to /home/pkgeval/.julia/compiled/v1.4/Tracker/cI3wW_6cjT7.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1263
[3] _require(::Base.PkgId) at ./loading.jl:1022
[4] require(::Base.PkgId) at ./loading.jl:920
[5] require(::Module, ::Symbol) at ./loading.jl:915
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/Flux/qXNjB/src/Flux.jl:15
Optimization: Error During Test at /home/pkgeval/.julia/packages/Surrogates/dfpEW/test/runtests.jl:7
Got exception outside of a @test
LoadError: Failed to precompile Flux [587475ba-b771-5e3f-ad9e-33799f191a9c] to /home/pkgeval/.julia/compiled/v1.4/Flux/QdkVy_6cjT7.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1263
[3] _require(::Base.PkgId) at ./loading.jl:1022
[4] require(::Base.PkgId) at ./loading.jl:920
[5] require(::Module, ::Symbol) at ./loading.jl:915
[6] include(::String) at ./client.jl:439
[7] macro expansion at /home/pkgeval/.julia/packages/Surrogates/dfpEW/test/runtests.jl:7 [inlined]
[8] macro expansion at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Test/src/Test.jl:1116 [inlined]
[9] top-level scope at /home/pkgeval/.julia/packages/Surrogates/dfpEW/test/runtests.jl:7
[10] include(::String) at ./client.jl:439
[11] top-level scope at none:6
[12] eval(::Module, ::Any) at ./boot.jl:331
[13] exec_options(::Base.JLOptions) at ./client.jl:264
[14] _start() at ./client.jl:484
in expression starting at /home/pkgeval/.julia/packages/Surrogates/dfpEW/test/optimization.jl:3
Test Summary: | Error Total
Optimization | 1 1
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/Surrogates/dfpEW/test/runtests.jl:7
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/Surrogates/dfpEW/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/Surrogates/dfpEW/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package Surrogates errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Operations.jl:1475
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:300
[5] #test#66 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[11] top-level scope at none:12