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1.4.0-DEV-81899bf99e.log
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1.4.0-DEV-81899bf99e.log
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Julia Version 1.4.0-DEV.634
Commit 81899bf99e (2019-12-18 10:13 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed Missings ─────────── v0.4.3
Installed SortingAlgorithms ── v0.3.1
Installed NearestNeighbors ─── v0.4.4
Installed OrderedCollections ─ v1.1.0
Installed DataStructures ───── v0.17.6
Installed StaticArrays ─────── v0.12.1
Installed StatsBase ────────── v0.32.0
Installed Clustering ───────── v0.13.3
Installed DataAPI ──────────── v1.1.0
Installed Distances ────────── v0.8.2
Updating `~/.julia/environments/v1.4/Project.toml`
[aaaa29a8] + Clustering v0.13.3
Updating `~/.julia/environments/v1.4/Manifest.toml`
[aaaa29a8] + Clustering v0.13.3
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[b4f34e82] + Distances v0.8.2
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.1.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[2a0f44e3] + Base64
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[4ec0a83e] + Unicode
Testing Clustering
Path `/home/pkgeval/.julia/packages/Clustering/Dlx92` exists and looks like the correct package. Using existing path.
Installed TranscodingStreams ─ v0.9.5
Installed CodecZlib ────────── v0.6.0
Installed BinaryProvider ───── v0.5.8
Updating `/tmp/jl_PqHesi/Project.toml`
[aaaa29a8] + Clustering v0.13.3 [`~/.julia/packages/Clustering/Dlx92`]
[944b1d66] + CodecZlib v0.6.0
Updating `/tmp/jl_PqHesi/Manifest.toml`
[b99e7846] + BinaryProvider v0.5.8
[aaaa29a8] ~ Clustering v0.13.3 ⇒ v0.13.3 [`~/.julia/packages/Clustering/Dlx92`]
[944b1d66] + CodecZlib v0.6.0
[3bb67fe8] + TranscodingStreams v0.9.5
[ea8e919c] + SHA
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Path `/home/pkgeval/.julia/packages/CodecZlib/5t9zO` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_bwZKeb/Project.toml`
[944b1d66] + CodecZlib v0.6.0 [`~/.julia/packages/CodecZlib/5t9zO`]
Updating `/tmp/jl_bwZKeb/Manifest.toml`
[944b1d66] ~ CodecZlib v0.6.0 ⇒ v0.6.0 [`~/.julia/packages/CodecZlib/5t9zO`]
Running sandbox
Status `/tmp/jl_PqHesi/Project.toml`
[aaaa29a8] Clustering v0.13.3 [`~/.julia/packages/Clustering/Dlx92`]
[944b1d66] CodecZlib v0.6.0
[b4f34e82] Distances v0.8.2
[b8a86587] NearestNeighbors v0.4.4
[2913bbd2] StatsBase v0.32.0
[37e2e46d] LinearAlgebra
[de0858da] Printf
[9a3f8284] Random
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
Runing tests:
* seeding.jl ...
Test Summary: | Pass Total
seeding | 64 64
* kmeans.jl ...
Iters objv objv-change | affected
-------------------------------------------------------------
0 1.470563e+00
1 7.352817e-01 -7.352817e-01 | 0
2 7.352817e-01 0.000000e+00 | 0
K-means converged with 2 iterations (objv = 0.7352816593329847)
K-means converged with 2 iterations (objv = 0.09164881001248792)
┌ Warning: The clustering cost increased at iteration #1
└ @ Clustering ~/.julia/packages/Clustering/Dlx92/src/kmeans.jl:179
Test Summary: | Pass Total
kmeans() (k-means) | 87 87
* kmedoids.jl ...
Iters objv objv-change
-----------------------------------------------------
0 1.589132e+00
1 1.623600e+00 3.446832e-02
2 1.623600e+00 0.000000e+00
K-medoids converged with 2 iterations (objv = 1.6236002870003423)
K-medoids converged with 2 iterations (objv = 1.6236002870003423)
Test Summary: | Pass Total
kmedoids() (k-medoids) | 26 26
* affprop.jl ...
Iters objv-change | exemplars
-----------------------------------------------------
1 1.7243e+00 | 1
2 1.1599e+00 | 1
3 1.0111e+00 | 1
4 8.2884e-01 | 1
5 6.2996e-01 | 1
6 4.4970e-01 | 1
7 3.0568e-01 | 1
8 1.9999e-01 | 1
9 1.2694e-01 | 1
10 7.8624e-02 | 1
Affinity propagation converged with 10 iterations: 1 exemplars.
Affinity propagation converged with 9 iterations: 1 exemplars.
Test Summary: | Pass Total
affinityprop() (affinity propagation) | 78 78
* dbscan.jl ...
Test Summary: | Pass Total
dbscan() (DBSCAN clustering) | 19 19
* fuzzycmeans.jl ...
Iters center-change
----------------------------
1 5.244585e-01
2 1.013155e-01
3 2.621402e-01
4 2.313798e-01
5 3.691017e-02
Fuzzy C-means converged with 5 iterations (δ = 0.036910170483319474)
Fuzzy C-means converged with 6 iterations (δ = 0.052544440650040276)
Test Summary: | Pass Total
fuzzy_cmeans() | 36 36
* counts.jl ...
Test Summary: | Pass Total
counts() (contingency matrix) | 22 22
* silhouette.jl ...
Test Summary: | Pass Broken Total
silhouettes() | 11 1 12
* varinfo.jl ...
Test Summary: | Pass Total
varinfo() (variational information) | 7 7
* randindex.jl ...
Test Summary: | Pass Total
randindex() (Rand index) | 13 13
* hclust.jl ...
Test Summary: | Pass Total
hclust() (hierarchical clustering) | 6665 6665
* mcl.jl ...
[ Info: Starting MCL iterations...
┌ Info: MCL iter. #0: rel.Δ=
└ rel_delta = 0.0
[ Info: MCL converged after 0 iteration(s)
[ Info: Generating MCL clusters...
[ Info: Starting MCL iterations...
[ Info: MCL converged after 0 iteration(s)
[ Info: Generating MCL clusters...
Test Summary: | Pass Broken Total
MCL | 33 1 34
* vmeasure.jl ...
Test Summary: | Pass Broken Total
V-measure | 8 1 9
* mutualinfo.jl ...
Test Summary: | Pass Total
mutualinfo() (mutual information) | 4 4
Testing Clustering tests passed