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1.4.0-DEV-81899bf99e.log
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1.4.0-DEV-81899bf99e.log
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Julia Version 1.4.0-DEV.634
Commit 81899bf99e (2019-12-18 10:13 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed PDMats ────────────────────── v0.9.10
Installed OpenSpecFun_jll ───────────── v0.5.3+1
Installed Missings ──────────────────── v0.4.3
Installed Tables ────────────────────── v0.2.11
Installed OrderedCollections ────────── v1.1.0
Installed StatsBase ─────────────────── v0.32.0
Installed ClinicalTrialUtilities ────── v0.2.1
Installed DataFrames ────────────────── v0.19.4
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed Reexport ──────────────────── v0.2.0
Installed Rmath ─────────────────────── v0.6.0
Installed StatsFuns ─────────────────── v0.9.3
Installed InvertedIndices ───────────── v1.0.0
Installed Parsers ───────────────────── v0.3.10
Installed FillArrays ────────────────── v0.8.2
Installed QuadGK ────────────────────── v2.3.1
Installed DataAPI ───────────────────── v1.1.0
Installed Arpack_jll ────────────────── v3.5.0+2
Installed Compat ────────────────────── v2.2.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed DataStructures ────────────── v0.17.6
Installed BinaryProvider ────────────── v0.5.8
Installed Arpack ────────────────────── v0.4.0
Installed CategoricalArrays ─────────── v0.7.4
Installed Distributions ─────────────── v0.21.11
Installed OpenBLAS_jll ──────────────── v0.3.7+1
Installed PooledArrays ──────────────── v0.5.2
Installed TableTraits ───────────────── v1.0.0
Installed Roots ─────────────────────── v0.8.4
Installed SpecialFunctions ──────────── v0.9.0
Installed DataValueInterfaces ───────── v1.0.0
Installed JSON ──────────────────────── v0.21.0
Updating `~/.julia/environments/v1.4/Project.toml`
[535c2557] + ClinicalTrialUtilities v0.2.1
Updating `~/.julia/environments/v1.4/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[b99e7846] + BinaryProvider v0.5.8
[324d7699] + CategoricalArrays v0.7.4
[535c2557] + ClinicalTrialUtilities v0.2.1
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[31c24e10] + Distributions v0.21.11
[1a297f60] + FillArrays v0.8.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[e1d29d7a] + Missings v0.4.3
[4536629a] + OpenBLAS_jll v0.3.7+1
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[1fd47b50] + QuadGK v2.3.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.6.0
[f2b01f46] + Roots v0.8.4
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.3
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath → `~/.julia/packages/Rmath/BoBag/deps/build.log`
Path `/home/pkgeval/.julia/packages/Rmath/BoBag` exists and looks like the correct package. Using existing path.
Updating `/tmp/jl_Kgm2UH/Project.toml`
[79098fc4] + Rmath v0.6.0 [`~/.julia/packages/Rmath/BoBag`]
Updating `/tmp/jl_Kgm2UH/Manifest.toml`
[79098fc4] ~ Rmath v0.6.0 ⇒ v0.6.0 [`~/.julia/packages/Rmath/BoBag`]
Testing ClinicalTrialUtilities
Path `/home/pkgeval/.julia/packages/ClinicalTrialUtilities/Vc4i3` exists and looks like the correct package. Using existing path.
Installed FilePathsBase ── v0.7.0
Installed WeakRefStrings ─ v0.6.1
Installed CSV ──────────── v0.5.20
Updating `/tmp/jl_HtlPlc/Project.toml`
[336ed68f] + CSV v0.5.20
[535c2557] + ClinicalTrialUtilities v0.2.1 [`~/.julia/packages/ClinicalTrialUtilities/Vc4i3`]
Updating `/tmp/jl_HtlPlc/Manifest.toml`
[336ed68f] + CSV v0.5.20
[535c2557] ~ ClinicalTrialUtilities v0.2.1 ⇒ v0.2.1 [`~/.julia/packages/ClinicalTrialUtilities/Vc4i3`]
[48062228] + FilePathsBase v0.7.0
[ea10d353] + WeakRefStrings v0.6.1
Running sandbox
Status `/tmp/jl_HtlPlc/Project.toml`
[336ed68f] CSV v0.5.20
[535c2557] ClinicalTrialUtilities v0.2.1 [`~/.julia/packages/ClinicalTrialUtilities/Vc4i3`]
[a93c6f00] DataFrames v0.19.4
[31c24e10] Distributions v0.21.11
[1fd47b50] QuadGK v2.3.1
[f2b01f46] Roots v0.8.4
[276daf66] SpecialFunctions v0.9.0
[2913bbd2] StatsBase v0.32.0
[9a3f8284] Random
[8dfed614] Test
Package name: ClinicalTrialUtilities, Version: 0.2.0
Clinical Trial Power and Sample Size Utilities
Copyright © 2019 Vladimir Arnautov aka PharmCat ([email protected])
For references, citations and copyrights run: ClinicalTrialUtilities.citation()
Licence: ClinicalTrialUtilities.licence()
Test Summary: |
Info: | No tests
----------------------------------
--------- START TEST ---------
----------------------------------
----------------------------------
Test Summary: | Pass Total
#1 ctsamplen Test | 20 20
----------------------------------
Test Summary: | Pass Total
#2 ctpower Test | 16 16
----------------------------------
Test Summary: | Pass Total
#3 besamplen Test | 18 18
----------------------------------
Test Summary: | Pass Total
#4 bepower Test | 26 26
----------------------------------
Test Summary: | Pass Total
#5 utils Test | 20 20
----------------------------------
Test Summary: | Pass Total
Internal functions test | 34 34
----------------------------------
Test Summary: | Pass Total
CI Test | 150 150
----------------------------------
Test Summary: | Pass Total
Simulations | 1 1
----------------------------------
Test Summary: | Pass Total
descriptives | 37 37
----------------------------------
Test Summary: | Pass Total
Frequency | 2 2
----------------------------------
Test Summary: | Pass Total
Random | 2 2
----------------------------------
Test Summary: | Pass Total
PK | 28 28
----------------------------------
Test Summary: | Pass Total
PD | 12 12
----------------------------------
Test Summary: | Pass Total
Scenario | 3 3
----------------------------------
Test Summary: | Pass Total
HTML export | 1 1
----------------------------------
Test Summary: | Pass Total
Errors | 5 5
Testing ClinicalTrialUtilities tests passed