1.5.0-DEV-ed177d17d6.log

Julia Version 1.5.0-DEV.158
Commit ed177d17d6 (2020-01-27 16:45 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
  JULIA_DEPOT_PATH = ::/usr/local/share/julia
  JULIA_NUM_THREADS = 2

 Resolving package versions...
 Installed IntelOpenMP_jll ───────────── v2018.0.3+0
 Installed ElasticArrays ─────────────── v1.0.0
 Installed Parsers ───────────────────── v0.3.10
 Installed ElasticPDMats ─────────────── v0.2.1
 Installed PositiveFactorizations ────── v0.2.3
 Installed Arpack ────────────────────── v0.4.0
 Installed ScikitLearn ───────────────── v0.5.1
 Installed Conda ─────────────────────── v1.3.0
 Installed DecisionTree ──────────────── v0.10.1
 Installed StatsFuns ─────────────────── v0.9.3
 Installed Blosc ─────────────────────── v0.5.1
 Installed DiffResults ───────────────── v1.0.2
 Installed AbstractFFTs ──────────────── v0.5.0
 Installed SortingAlgorithms ─────────── v0.3.1
 Installed QuadGK ────────────────────── v2.3.1
 Installed FFTW ──────────────────────── v1.2.0
 Installed Distributions ─────────────── v0.22.3
 Installed Optim ─────────────────────── v0.19.7
 Installed ZygoteRules ───────────────── v0.2.0
 Installed Compat ────────────────────── v2.2.0
 Installed CMakeWrapper ──────────────── v0.2.3
 Installed LaTeXStrings ──────────────── v1.0.3
 Installed ArrayInterface ────────────── v2.3.1
 Installed IterTools ─────────────────── v1.3.0
 Installed BinaryProvider ────────────── v0.5.8
 Installed RDatasets ─────────────────── v0.6.6
 Installed OpenSpecFun_jll ───────────── v0.5.3+1
 Installed JLD ───────────────────────── v0.9.1
 Installed Tables ────────────────────── v0.2.11
 Installed NLSolversBase ─────────────── v7.6.0
 Installed Arpack_jll ────────────────── v3.5.0+2
 Installed OpenBLAS_jll ──────────────── v0.3.7+4
 Installed WeakRefStrings ────────────── v0.6.2
 Installed Calculus ──────────────────── v0.5.1
 Installed URIParser ─────────────────── v0.4.0
 Installed SpecialFunctions ──────────── v0.9.0
 Installed FilePathsBase ─────────────── v0.7.0
 Installed OrderedCollections ────────── v1.1.0
 Installed Documenter ────────────────── v0.24.4
 Installed StatsBase ─────────────────── v0.32.0
 Installed GaussianProcesses ─────────── v0.11.1
 Installed IteratorInterfaceExtensions ─ v1.0.0
 Installed Parameters ────────────────── v0.12.0
 Installed ColorTypes ────────────────── v0.9.1
 Installed CommonSubexpressions ──────── v0.2.0
 Installed FileIO ────────────────────── v1.2.1
 Installed NNlib ─────────────────────── v0.6.4
 Installed DocStringExtensions ───────── v0.8.1
 Installed ForwardDiff ───────────────── v0.10.9
 Installed NearestNeighbors ──────────── v0.4.4
 Installed Distances ─────────────────── v0.8.2
 Installed DiffEqDiffTools ───────────── v1.7.0
 Installed Zlib_jll ──────────────────── v1.2.11+7
 Installed FFTW_jll ──────────────────── v3.3.9+3
 Installed DataStructures ────────────── v0.17.9
 Installed Zygote ────────────────────── v0.4.6
 Installed RData ─────────────────────── v0.6.3
 Installed CodecZlib ─────────────────── v0.6.0
 Installed BinDeps ───────────────────── v1.0.0
 Installed DataValueInterfaces ───────── v1.0.0
 Installed LineSearches ──────────────── v7.0.1
 Installed FastGaussQuadrature ───────── v0.4.2
 Installed Missings ──────────────────── v0.4.3
 Installed FixedPointNumbers ─────────── v0.7.1
 Installed StaticArrays ──────────────── v0.12.1
 Installed Libiconv_jll ──────────────── v1.16.0+0
 Installed PyCall ────────────────────── v1.91.2
 Installed IRTools ───────────────────── v0.3.1
 Installed JSON ──────────────────────── v0.21.0
 Installed CategoricalArrays ─────────── v0.7.7
 Installed LegacyStrings ─────────────── v0.4.1
 Installed TableTraits ───────────────── v1.0.0
 Installed PooledArrays ──────────────── v0.5.3
 Installed Mocking ───────────────────── v0.7.0
 Installed VersionParsing ────────────── v1.2.0
 Installed ScikitLearnBase ───────────── v0.5.0
 Installed DataAPI ───────────────────── v1.1.0
 Installed Clustering ────────────────── v0.13.3
 Installed MKL_jll ───────────────────── v2019.0.117+2
 Installed DataFrames ────────────────── v0.20.0
 Installed ProgressMeter ─────────────── v1.2.0
 Installed FillArrays ────────────────── v0.8.4
 Installed SoftGlobalScope ───────────── v1.0.10
 Installed EzXML ─────────────────────── v1.1.0
 Installed NBInclude ─────────────────── v2.1.0
 Installed MacroTools ────────────────── v0.5.3
 Installed InvertedIndices ───────────── v1.0.0
 Installed DiffRules ─────────────────── v1.0.0
 Installed Requires ──────────────────── v1.0.0
 Installed NaNMath ───────────────────── v0.3.3
 Installed RecipesBase ───────────────── v0.7.0
 Installed CSV ───────────────────────── v0.5.22
 Installed PDMats ────────────────────── v0.9.11
 Installed FiniteDiff ────────────────── v2.1.0
 Installed Colors ────────────────────── v0.11.2
 Installed Reexport ──────────────────── v0.2.0
 Installed Rmath ─────────────────────── v0.6.0
 Installed TranscodingStreams ────────── v0.9.5
 Installed XML2_jll ──────────────────── v2.9.9+1
 Installed CMake ─────────────────────── v1.1.2
 Installed HDF5 ──────────────────────── v0.12.5
 Installed GaussianMixtures ──────────── v0.3.0
 Installed PyPlot ────────────────────── v2.8.2
 Installed TimeZones ─────────────────── v1.0.0
  Updating `~/.julia/environments/v1.5/Project.toml`
  [3646fa90] + ScikitLearn v0.5.1
  Updating `~/.julia/environments/v1.5/Manifest.toml`
  [621f4979] + AbstractFFTs v0.5.0
  [7d9fca2a] + Arpack v0.4.0
  [68821587] + Arpack_jll v3.5.0+2
  [4fba245c] + ArrayInterface v2.3.1
  [9e28174c] + BinDeps v1.0.0
  [b99e7846] + BinaryProvider v0.5.8
  [a74b3585] + Blosc v0.5.1
  [631607c0] + CMake v1.1.2
  [d5fb7624] + CMakeWrapper v0.2.3
  [336ed68f] + CSV v0.5.22
  [49dc2e85] + Calculus v0.5.1
  [324d7699] + CategoricalArrays v0.7.7
  [aaaa29a8] + Clustering v0.13.3
  [944b1d66] + CodecZlib v0.6.0
  [3da002f7] + ColorTypes v0.9.1
  [5ae59095] + Colors v0.11.2
  [bbf7d656] + CommonSubexpressions v0.2.0
  [34da2185] + Compat v2.2.0
  [8f4d0f93] + Conda v1.3.0
  [9a962f9c] + DataAPI v1.1.0
  [a93c6f00] + DataFrames v0.20.0
  [864edb3b] + DataStructures v0.17.9
  [e2d170a0] + DataValueInterfaces v1.0.0
  [7806a523] + DecisionTree v0.10.1
  [01453d9d] + DiffEqDiffTools v1.7.0
  [163ba53b] + DiffResults v1.0.2
  [b552c78f] + DiffRules v1.0.0
  [b4f34e82] + Distances v0.8.2
  [31c24e10] + Distributions v0.22.3
  [ffbed154] + DocStringExtensions v0.8.1
  [e30172f5] + Documenter v0.24.4
  [fdbdab4c] + ElasticArrays v1.0.0
  [2904ab23] + ElasticPDMats v0.2.1
  [8f5d6c58] + EzXML v1.1.0
  [7a1cc6ca] + FFTW v1.2.0
  [f5851436] + FFTW_jll v3.3.9+3
  [442a2c76] + FastGaussQuadrature v0.4.2
  [5789e2e9] + FileIO v1.2.1
  [48062228] + FilePathsBase v0.7.0
  [1a297f60] + FillArrays v0.8.4
  [6a86dc24] + FiniteDiff v2.1.0
  [53c48c17] + FixedPointNumbers v0.7.1
  [f6369f11] + ForwardDiff v0.10.9
  [cc18c42c] + GaussianMixtures v0.3.0
  [891a1506] + GaussianProcesses v0.11.1
  [f67ccb44] + HDF5 v0.12.5
  [7869d1d1] + IRTools v0.3.1
  [1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
  [41ab1584] + InvertedIndices v1.0.0
  [c8e1da08] + IterTools v1.3.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [4138dd39] + JLD v0.9.1
  [682c06a0] + JSON v0.21.0
  [b964fa9f] + LaTeXStrings v1.0.3
  [1b4a561d] + LegacyStrings v0.4.1
  [94ce4f54] + Libiconv_jll v1.16.0+0
  [d3d80556] + LineSearches v7.0.1
  [856f044c] + MKL_jll v2019.0.117+2
  [1914dd2f] + MacroTools v0.5.3
  [e1d29d7a] + Missings v0.4.3
  [78c3b35d] + Mocking v0.7.0
  [0db19996] + NBInclude v2.1.0
  [d41bc354] + NLSolversBase v7.6.0
  [872c559c] + NNlib v0.6.4
  [77ba4419] + NaNMath v0.3.3
  [b8a86587] + NearestNeighbors v0.4.4
  [4536629a] + OpenBLAS_jll v0.3.7+4
  [efe28fd5] + OpenSpecFun_jll v0.5.3+1
  [429524aa] + Optim v0.19.7
  [bac558e1] + OrderedCollections v1.1.0
  [90014a1f] + PDMats v0.9.11
  [d96e819e] + Parameters v0.12.0
  [69de0a69] + Parsers v0.3.10
  [2dfb63ee] + PooledArrays v0.5.3
  [85a6dd25] + PositiveFactorizations v0.2.3
  [92933f4c] + ProgressMeter v1.2.0
  [438e738f] + PyCall v1.91.2
  [d330b81b] + PyPlot v2.8.2
  [1fd47b50] + QuadGK v2.3.1
  [df47a6cb] + RData v0.6.3
  [ce6b1742] + RDatasets v0.6.6
  [3cdcf5f2] + RecipesBase v0.7.0
  [189a3867] + Reexport v0.2.0
  [ae029012] + Requires v1.0.0
  [79098fc4] + Rmath v0.6.0
  [3646fa90] + ScikitLearn v0.5.1
  [6e75b9c4] + ScikitLearnBase v0.5.0
  [b85f4697] + SoftGlobalScope v1.0.10
  [a2af1166] + SortingAlgorithms v0.3.1
  [276daf66] + SpecialFunctions v0.9.0
  [90137ffa] + StaticArrays v0.12.1
  [2913bbd2] + StatsBase v0.32.0
  [4c63d2b9] + StatsFuns v0.9.3
  [3783bdb8] + TableTraits v1.0.0
  [bd369af6] + Tables v0.2.11
  [f269a46b] + TimeZones v1.0.0
  [3bb67fe8] + TranscodingStreams v0.9.5
  [30578b45] + URIParser v0.4.0
  [81def892] + VersionParsing v1.2.0
  [ea10d353] + WeakRefStrings v0.6.2
  [02c8fc9c] + XML2_jll v2.9.9+1
  [83775a58] + Zlib_jll v1.2.11+7
  [e88e6eb3] + Zygote v0.4.6
  [700de1a5] + ZygoteRules v0.2.0
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8bb1440f] + DelimitedFiles 
  [8ba89e20] + Distributed 
  [9fa8497b] + Future 
  [b77e0a4c] + InteractiveUtils 
  [76f85450] + LibGit2 
  [8f399da3] + Libdl 
  [37e2e46d] + LinearAlgebra 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [44cfe95a] + Pkg 
  [de0858da] + Printf 
  [9abbd945] + Profile 
  [3fa0cd96] + REPL 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [1a1011a3] + SharedArrays 
  [6462fe0b] + Sockets 
  [2f01184e] + SparseArrays 
  [10745b16] + Statistics 
  [4607b0f0] + SuiteSparse 
  [8dfed614] + Test 
  [cf7118a7] + UUIDs 
  [4ec0a83e] + Unicode 
  Building Conda ────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
  Updating `/tmp/jl_k9PhZK/Project.toml`
 [no changes]
  Updating `/tmp/jl_k9PhZK/Manifest.toml`
 [no changes]
  Building CMake ────→ `~/.julia/packages/CMake/nSK2r/deps/build.log`
  Updating `/tmp/jl_3sDVKw/Project.toml`
 [no changes]
  Updating `/tmp/jl_3sDVKw/Manifest.toml`
 [no changes]
  Building Blosc ────→ `~/.julia/packages/Blosc/lzFr0/deps/build.log`
  Updating `/tmp/jl_eRI6AN/Project.toml`
 [no changes]
  Updating `/tmp/jl_eRI6AN/Manifest.toml`
 [no changes]
  Building FFTW ─────→ `~/.julia/packages/FFTW/qqcBj/deps/build.log`
  Updating `/tmp/jl_Rv5RO9/Project.toml`
 [no changes]
  Updating `/tmp/jl_Rv5RO9/Manifest.toml`
 [no changes]
  Building NNlib ────→ `~/.julia/packages/NNlib/3krvM/deps/build.log`
  Updating `/tmp/jl_2Q9FNy/Project.toml`
 [no changes]
  Updating `/tmp/jl_2Q9FNy/Manifest.toml`
 [no changes]
  Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
  Updating `/tmp/jl_hVFLla/Project.toml`
 [no changes]
  Updating `/tmp/jl_hVFLla/Manifest.toml`
 [no changes]
  Building PyCall ───→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
  Updating `/tmp/jl_oQbhT4/Project.toml`
 [no changes]
  Updating `/tmp/jl_oQbhT4/Manifest.toml`
 [no changes]
  Building Rmath ────→ `~/.julia/packages/Rmath/BoBag/deps/build.log`
  Updating `/tmp/jl_NfYoMs/Project.toml`
 [no changes]
  Updating `/tmp/jl_NfYoMs/Manifest.toml`
 [no changes]
  Building HDF5 ─────→ `~/.julia/packages/HDF5/Zh9on/deps/build.log`
  Updating `/tmp/jl_M5Pqn5/Project.toml`
 [no changes]
  Updating `/tmp/jl_M5Pqn5/Manifest.toml`
 [no changes]
  Building TimeZones → `~/.julia/packages/TimeZones/vYAiM/deps/build.log`
  Updating `/tmp/jl_l4bpw5/Project.toml`
 [no changes]
  Updating `/tmp/jl_l4bpw5/Manifest.toml`
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   Testing ScikitLearn
  Updating `/tmp/jl_AC8LKP/Project.toml`
 [no changes]
  Updating `/tmp/jl_AC8LKP/Manifest.toml`
 [no changes]
Running sandbox
Status `/tmp/jl_AC8LKP/Project.toml`
  [34da2185] Compat v2.2.0
  [8f4d0f93] Conda v1.3.0
  [a93c6f00] DataFrames v0.20.0
  [7806a523] DecisionTree v0.10.1
  [cc18c42c] GaussianMixtures v0.3.0
  [891a1506] GaussianProcesses v0.11.1
  [c8e1da08] IterTools v1.3.0
  [1914dd2f] MacroTools v0.5.3
  [0db19996] NBInclude v2.1.0
  [d96e819e] Parameters v0.12.0
  [438e738f] PyCall v1.91.2
  [d330b81b] PyPlot v2.8.2
  [df47a6cb] RData v0.6.3
  [ce6b1742] RDatasets v0.6.6
  [3646fa90] ScikitLearn v0.5.1
  [6e75b9c4] ScikitLearnBase v0.5.0
  [2913bbd2] StatsBase v0.32.0
  [8ba89e20] Distributed 
  [37e2e46d] LinearAlgebra 
  [de0858da] Printf 
  [9a3f8284] Random 
  [2f01184e] SparseArrays 
  [10745b16] Statistics 
  [8dfed614] Test 
ERROR: LoadError: PyError (PyImport_ImportModule

The Python package sklearn could not be found by pyimport. Usually this means
that you did not install sklearn in the Python version being used by PyCall.

PyCall is currently configured to use the Python version at:

/usr/bin/python3

and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the sklearn module.

One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.

Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia.  As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the sklearn module, you can use `pyimport_conda("sklearn", PKG)`,
where PKG is the Anaconda package the contains the module sklearn,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).

) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'sklearn'",)

Stacktrace:
 [1] pyimport(::String) at /home/pkgeval/.julia/packages/PyCall/ttONZ/src/PyCall.jl:544
 [2] pyimport_conda(::String, ::String, ::String) at /home/pkgeval/.julia/packages/PyCall/ttONZ/src/PyCall.jl:702
 [3] pyimport_conda(::String, ::String) at /home/pkgeval/.julia/packages/PyCall/ttONZ/src/PyCall.jl:701
 [4] top-level scope at /home/pkgeval/.julia/packages/ScikitLearn/bo2Pt/test/runtests.jl:6
 [5] include(::String) at ./client.jl:439
 [6] top-level scope at none:6
in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/bo2Pt/test/runtests.jl:6
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])

cd("/home/pkgeval/.julia/packages/ScikitLearn/bo2Pt/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/ScikitLearn/bo2Pt/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package ScikitLearn errored during testing
Stacktrace:
 [1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:54
 [2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1471
 [3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:313
 [4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:300
 [5] #test#66 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
 [6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
 [7] #test#65 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
 [8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
 [9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
 [10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
 [11] top-level scope at none:13