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1.5.0-DEV-ed177d17d6.log
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Julia Version 1.5.0-DEV.158
Commit ed177d17d6 (2020-01-27 16:45 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed RecursiveFactorization ──────────────── v0.1.0
Installed Arpack ──────────────────────────────── v0.4.0
Installed RecursiveArrayTools ─────────────────── v2.0.4
Installed QuadGK ──────────────────────────────── v2.3.1
Installed StatsFuns ───────────────────────────── v0.9.3
Installed ChainRulesCore ──────────────────────── v0.6.1
Installed PiecewiseDeterministicMarkovProcesses ─ v0.0.1
Installed Distributions ───────────────────────── v0.22.3
Installed SortingAlgorithms ───────────────────── v0.3.1
Installed Compat ──────────────────────────────── v2.2.0
Installed OpenSpecFun_jll ─────────────────────── v0.5.3+1
Installed ArrayInterface ──────────────────────── v2.3.1
Installed BinaryProvider ──────────────────────── v0.5.8
Installed ZygoteRules ─────────────────────────── v0.2.0
Installed OpenBLAS_jll ────────────────────────── v0.3.7+4
Installed Arpack_jll ──────────────────────────── v3.5.0+2
Installed OrderedCollections ──────────────────── v1.1.0
Installed Sundials ────────────────────────────── v3.8.1
Installed IteratorInterfaceExtensions ─────────── v1.0.0
Installed SpecialFunctions ────────────────────── v0.9.0
Installed StatsBase ───────────────────────────── v0.32.0
Installed DocStringExtensions ─────────────────── v0.8.1
Installed URIParser ───────────────────────────── v0.4.0
Installed Parameters ──────────────────────────── v0.12.0
Installed DataStructures ──────────────────────── v0.17.9
Installed Missings ────────────────────────────── v0.4.3
Installed StaticArrays ────────────────────────── v0.12.1
Installed MuladdMacro ─────────────────────────── v0.2.2
Installed BinDeps ─────────────────────────────── v1.0.0
Installed Roots ───────────────────────────────── v0.8.4
Installed TableTraits ─────────────────────────── v1.0.0
Installed DiffEqBase ──────────────────────────── v6.13.1
Installed FunctionWrappers ────────────────────── v1.0.0
Installed LSODA ───────────────────────────────── v0.6.1
Installed Requires ────────────────────────────── v1.0.0
Installed RecipesBase ─────────────────────────── v0.7.0
Installed DataAPI ─────────────────────────────── v1.1.0
Installed FillArrays ──────────────────────────── v0.8.4
Installed MacroTools ──────────────────────────── v0.5.3
Installed PDMats ──────────────────────────────── v0.9.11
Installed IterativeSolvers ────────────────────── v0.8.1
Installed Rmath ───────────────────────────────── v0.6.0
Installed Reexport ────────────────────────────── v0.2.0
Installed TreeViews ───────────────────────────── v0.3.0
Updating `~/.julia/environments/v1.5/Project.toml`
[86206cdf] + PiecewiseDeterministicMarkovProcesses v0.0.1
Updating `~/.julia/environments/v1.5/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[4fba245c] + ArrayInterface v2.3.1
[9e28174c] + BinDeps v1.0.0
[b99e7846] + BinaryProvider v0.5.8
[d360d2e6] + ChainRulesCore v0.6.1
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.9
[2b5f629d] + DiffEqBase v6.13.1
[31c24e10] + Distributions v0.22.3
[ffbed154] + DocStringExtensions v0.8.1
[1a297f60] + FillArrays v0.8.4
[069b7b12] + FunctionWrappers v1.0.0
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[7f56f5a3] + LSODA v0.6.1
[1914dd2f] + MacroTools v0.5.3
[e1d29d7a] + Missings v0.4.3
[46d2c3a1] + MuladdMacro v0.2.2
[4536629a] + OpenBLAS_jll v0.3.7+4
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.11
[d96e819e] + Parameters v0.12.0
[86206cdf] + PiecewiseDeterministicMarkovProcesses v0.0.1
[1fd47b50] + QuadGK v2.3.1
[3cdcf5f2] + RecipesBase v0.7.0
[731186ca] + RecursiveArrayTools v2.0.4
[f2c3362d] + RecursiveFactorization v0.1.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.0
[79098fc4] + Rmath v0.6.0
[f2b01f46] + Roots v0.8.4
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.3
[c3572dad] + Sundials v3.8.1
[3783bdb8] + TableTraits v1.0.0
[a2a6695c] + TreeViews v0.3.0
[30578b45] + URIParser v0.4.0
[700de1a5] + ZygoteRules v0.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Sundials → `~/.julia/packages/Sundials/MllUG/deps/build.log`
Updating `/tmp/jl_EY38ve/Project.toml`
[no changes]
Updating `/tmp/jl_EY38ve/Manifest.toml`
[no changes]
Building LSODA ───→ `~/.julia/packages/LSODA/uaBH4/deps/build.log`
Updating `/tmp/jl_1ESTnk/Project.toml`
[no changes]
Updating `/tmp/jl_1ESTnk/Manifest.toml`
[no changes]
Building Rmath ───→ `~/.julia/packages/Rmath/BoBag/deps/build.log`
Updating `/tmp/jl_AZtp11/Project.toml`
[no changes]
Updating `/tmp/jl_AZtp11/Manifest.toml`
[no changes]
Testing PiecewiseDeterministicMarkovProcesses
Installed VertexSafeGraphs ─────── v0.1.1
Installed DimensionalPlotRecipes ─ v1.0.0
Installed DiffResults ──────────── v1.0.2
Installed DiffEqPhysics ────────── v3.4.0
Installed DifferentialEquations ── v6.10.1
Installed RandomNumbers ────────── v1.4.0
Installed BandedMatrices ───────── v0.14.3
Installed StochasticDiffEq ─────── v6.18.0
Installed OrdinaryDiffEq ───────── v5.28.1
Installed NLSolversBase ────────── v7.6.0
Installed SteadyStateDiffEq ────── v1.5.0
Installed CommonSubexpressions ─── v0.2.0
Installed DiffEqJump ───────────── v6.5.0
Installed Distances ────────────── v0.8.2
Installed ArrayLayouts ─────────── v0.1.5
Installed Inflate ──────────────── v0.1.1
Installed ResettableStacks ─────── v1.0.0
Installed LineSearches ─────────── v7.0.1
Installed BoundaryValueDiffEq ──── v2.4.0
Installed SparseDiffTools ──────── v1.3.3
Installed ForwardDiff ──────────── v0.10.9
Installed LightGraphs ──────────── v1.3.0
Installed ArnoldiMethod ────────── v0.0.4
Installed DiffEqFinancial ──────── v2.2.1
Installed DiffEqNoiseProcess ───── v3.8.0
Installed ExponentialUtilities ─── v1.6.0
Installed PoissonRandom ────────── v0.4.0
Installed NLsolve ──────────────── v4.3.0
Installed DelayDiffEq ──────────── v5.20.0
Installed GenericSVD ───────────── v0.2.2
Installed MultiScaleArrays ─────── v1.6.0
Installed DiffRules ────────────── v1.0.0
Installed SimpleTraits ─────────── v0.9.1
Installed NaNMath ──────────────── v0.3.3
Installed DiffEqCallbacks ──────── v2.11.0
Installed FiniteDiff ───────────── v2.1.0
Installed Adapt ────────────────── v1.0.0
Updating `/tmp/jl_rQOwY4/Project.toml`
[0c46a032] + DifferentialEquations v6.10.1
Updating `/tmp/jl_rQOwY4/Manifest.toml`
[79e6a3ab] + Adapt v1.0.0
[ec485272] + ArnoldiMethod v0.0.4
[4c555306] + ArrayLayouts v0.1.5
[aae01518] + BandedMatrices v0.14.3
[764a87c0] + BoundaryValueDiffEq v2.4.0
[bbf7d656] + CommonSubexpressions v0.2.0
[bcd4f6db] + DelayDiffEq v5.20.0
[459566f4] + DiffEqCallbacks v2.11.0
[5a0ffddc] + DiffEqFinancial v2.2.1
[c894b116] + DiffEqJump v6.5.0
[77a26b50] + DiffEqNoiseProcess v3.8.0
[055956cb] + DiffEqPhysics v3.4.0
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.0
[0c46a032] + DifferentialEquations v6.10.1
[c619ae07] + DimensionalPlotRecipes v1.0.0
[b4f34e82] + Distances v0.8.2
[d4d017d3] + ExponentialUtilities v1.6.0
[6a86dc24] + FiniteDiff v2.1.0
[f6369f11] + ForwardDiff v0.10.9
[01680d73] + GenericSVD v0.2.2
[d25df0c9] + Inflate v0.1.1
[093fc24a] + LightGraphs v1.3.0
[d3d80556] + LineSearches v7.0.1
[f9640e96] + MultiScaleArrays v1.6.0
[d41bc354] + NLSolversBase v7.6.0
[2774e3e8] + NLsolve v4.3.0
[77ba4419] + NaNMath v0.3.3
[1dea7af3] + OrdinaryDiffEq v5.28.1
[e409e4f3] + PoissonRandom v0.4.0
[e6cf234a] + RandomNumbers v1.4.0
[ae5879a3] + ResettableStacks v1.0.0
[699a6c99] + SimpleTraits v0.9.1
[47a9eef4] + SparseDiffTools v1.3.3
[9672c7b4] + SteadyStateDiffEq v1.5.0
[789caeaf] + StochasticDiffEq v6.18.0
[19fa3120] + VertexSafeGraphs v0.1.1
Running sandbox
Status `/tmp/jl_rQOwY4/Project.toml`
[0c46a032] DifferentialEquations v6.10.1
[31c24e10] Distributions v0.22.3
[7f56f5a3] LSODA v0.6.1
[d96e819e] Parameters v0.12.0
[86206cdf] PiecewiseDeterministicMarkovProcesses v0.0.1
[731186ca] RecursiveArrayTools v2.0.4
[2913bbd2] StatsBase v0.32.0
[c3572dad] Sundials v3.8.1
[37e2e46d] LinearAlgebra
[9a3f8284] Random
┌ Warning: Package PiecewiseDeterministicMarkovProcesses does not have DifferentialEquations in its dependencies:
│ - If you have PiecewiseDeterministicMarkovProcesses checked out for development and have
│ added DifferentialEquations as a dependency but haven't updated your primary
│ environment's manifest file, try `Pkg.resolve()`.
│ - Otherwise you may need to report an issue with PiecewiseDeterministicMarkovProcesses
└ Loading DifferentialEquations into PiecewiseDeterministicMarkovProcesses from project dependency, future warnings for PiecewiseDeterministicMarkovProcesses are suppressed.
WARNING: Method definition pdmp!(Any, Any, Any, Any, Any, Any, Any, Any) in module PiecewiseDeterministicMarkovProcesses at /home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/src/PiecewiseDeterministicMarkovProcesses.jl:72 overwritten at /home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/src/PiecewiseDeterministicMarkovProcesses.jl:74.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition pdmp!##kw(Any, typeof(PiecewiseDeterministicMarkovProcesses.pdmp!), Any, Any, Any, Any, Any, Any, Any, Any) in module PiecewiseDeterministicMarkovProcesses at /home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/src/PiecewiseDeterministicMarkovProcesses.jl:72 overwritten at /home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/src/PiecewiseDeterministicMarkovProcesses.jl:74.
** incremental compilation may be fatally broken for this module **
ERROR: LoadError: ArgumentError: Package Test not found in current path:
- Run `import Pkg; Pkg.add("Test")` to install the Test package.
Stacktrace:
[1] require(::Module, ::Symbol) at ./loading.jl:892
[2] include(::String) at ./client.jl:439
[3] top-level scope at none:6
in expression starting at /home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/test/runtests.jl:1
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package PiecewiseDeterministicMarkovProcesses errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1471
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:300
[5] #test#66 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[11] top-level scope at none:13