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1.6.0-DEV-444aa87348.log
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Julia Version 1.6.0-DEV.1274
Commit 444aa87348 (2020-10-17 22:11 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-11.0.0 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
JULIA_MAX_NUM_PRECOMPILE_FILES = 9223372036854775807
Resolving package versions...
Installed SortingAlgorithms ─────────── v0.3.1
Installed TableOperations ───────────── v0.2.1
Installed TableTraits ───────────────── v1.0.0
Installed Missings ──────────────────── v0.4.4
Installed NearestNeighbors ──────────── v0.4.7
Installed Impute ────────────────────── v0.5.1
Installed DataStructures ────────────── v0.17.20
Installed StaticArrays ──────────────── v0.12.4
Installed DataValueInterfaces ───────── v1.0.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed DataAPI ───────────────────── v1.3.0
Installed Distances ─────────────────── v0.9.2
Installed Tables ────────────────────── v1.1.0
Installed OrderedCollections ────────── v1.3.1
Installed IterTools ─────────────────── v1.3.0
Installed StatsBase ─────────────────── v0.32.2
Updating `~/.julia/environments/v1.6/Project.toml`
[f7bf1975] + Impute v0.5.1
Updating `~/.julia/environments/v1.6/Manifest.toml`
[9a962f9c] + DataAPI v1.3.0
[864edb3b] + DataStructures v0.17.20
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.9.2
[f7bf1975] + Impute v0.5.1
[c8e1da08] + IterTools v1.3.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[e1d29d7a] + Missings v0.4.4
[b8a86587] + NearestNeighbors v0.4.7
[bac558e1] + OrderedCollections v1.3.1
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.4
[2913bbd2] + StatsBase v0.32.2
[ab02a1b2] + TableOperations v0.2.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[2a0f44e3] + Base64
[b77e0a4c] + InteractiveUtils
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[9e88b42a] + Serialization
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[4ec0a83e] + Unicode
Precompiling project... (tip: to disable auto-precompilation set ENV["JULIA_PKG_PRECOMPILE_AUTO"]=0)
[90m[32m ✓ [39mDataValueInterfaces[39m
[90m[32m ✓ [39mIteratorInterfaceExtensions[39m
[90m[32m ✓ [39mDataAPI[39m
[90m[32m ✓ [39mTableTraits[39m
[90m[32m ✓ [39mOrderedCollections[39m
[90m[32m ✓ [39mIterTools[39m
[90m[32m ✓ [39mDistances[39m
[90m[32m ✓ [39mMissings[39m
[90m[32m ✓ [39mTables[39m
[90m[32m ✓ [39mTableOperations[39m
[90m[32m ✓ [39mDataStructures[39m
[90m[32m ✓ [39mSortingAlgorithms[39m
[90m[32m ✓ [39mStaticArrays[39m
[90m[32m ✓ [39mStatsBase[39m
[90m[32m ✓ [39mNearestNeighbors[39m
[32m ✓ [39mImpute
16 dependencies successfully precompiled
Testing Impute
Status `/tmp/jl_Wporb1/Project.toml`
[39de3d68] AxisArrays v0.4.3
[94b1ba4f] AxisKeys v0.1.6
[861a8166] Combinatorics v1.0.2
[a93c6f00] DataFrames v0.21.8
[b4f34e82] Distances v0.9.2
[f7bf1975] Impute v0.5.1
[c8e1da08] IterTools v1.3.0
[e1d29d7a] Missings v0.4.4
[b8a86587] NearestNeighbors v0.4.7
[ce6b1742] RDatasets v0.6.10
[2913bbd2] StatsBase v0.32.2
[ab02a1b2] TableOperations v0.2.1
[bd369af6] Tables v1.1.0
[ade2ca70] Dates
[37e2e46d] LinearAlgebra
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_Wporb1/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[39de3d68] AxisArrays v0.4.3
[94b1ba4f] AxisKeys v0.1.6
[336ed68f] CSV v0.7.7
[324d7699] CategoricalArrays v0.8.3
[944b1d66] CodecZlib v0.7.0
[861a8166] Combinatorics v1.0.2
[34da2185] Compat v3.20.0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.8
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.9.2
[da5c29d0] EllipsisNotation v0.4.0
[e2ba6199] ExprTools v0.1.3
[8f5d6c58] EzXML v1.1.0
[5789e2e9] FileIO v1.4.3
[f7bf1975] Impute v0.5.1
[8197267c] IntervalSets v0.5.1
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[692b3bcd] JLLWrappers v1.1.2
[682c06a0] JSON v0.21.1
[1fad7336] LazyStack v0.0.7
[94ce4f54] Libiconv_jll v1.16.0+7
[1914dd2f] MacroTools v0.5.5
[e1d29d7a] Missings v0.4.4
[78c3b35d] Mocking v0.7.1
[356022a1] NamedDims v0.2.28
[b8a86587] NearestNeighbors v0.4.7
[6fe1bfb0] OffsetArrays v1.3.1
[bac558e1] OrderedCollections v1.3.1
[69de0a69] Parsers v1.0.11
[2dfb63ee] PooledArrays v0.5.3
[df47a6cb] RData v0.7.2
[ce6b1742] RDatasets v0.6.10
[b3c3ace0] RangeArrays v0.3.2
[3cdcf5f2] RecipesBase v1.1.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.1.0
[91c51154] SentinelArrays v1.2.16
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.32.2
[856f2bd8] StructTypes v1.1.0
[ab02a1b2] TableOperations v0.2.1
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.1.0
[f269a46b] TimeZones v1.4.0
[3bb67fe8] TranscodingStreams v0.9.5
[02c8fc9c] XML2_jll v2.9.10+3
[83775a58] Zlib_jll v1.2.11+18
[700de1a5] ZygoteRules v0.2.0
[0dad84c5] ArgTools
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[f43a241f] Downloads
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[b27032c2] LibCURL
[deac9b47] LibCURL_jll
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[14a3606d] MozillaCACerts_jll
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
ERROR: LoadError: LoadError: UndefVarError: f not defined
Stacktrace:
[1] macro expansion
@ ~/.julia/packages/MacroTools/X77lQ/src/utils.jl:44 [inlined]
[2] macro expansion
@ ~/.julia/packages/MacroTools/X77lQ/src/match/macro.jl:18 [inlined]
[3] shortdef1(ex::Expr)
@ MacroTools ~/.julia/packages/MacroTools/X77lQ/src/utils.jl:240
[4] prewalk
@ ~/.julia/packages/MacroTools/X77lQ/src/utils.jl:126 [inlined]
[5] shortdef
@ ~/.julia/packages/MacroTools/X77lQ/src/utils.jl:251 [inlined]
[6] macro expansion
@ ~/.julia/packages/MacroTools/X77lQ/src/match/macro.jl:72 [inlined]
[7] gradm(ex::Expr, mut::Bool)
@ ZygoteRules ~/.julia/packages/ZygoteRules/6nssF/src/adjoint.jl:24
[8] var"@adjoint"(__source__::LineNumberNode, __module__::Module, ex::Any)
@ ZygoteRules ~/.julia/packages/ZygoteRules/6nssF/src/adjoint.jl:63
[9] include
@ ./Base.jl:389 [inlined]
[10] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::String)
@ Base ./loading.jl:1225
[11] top-level scope
@ none:1
[12] eval
@ ./boot.jl:360 [inlined]
[13] eval(x::Expr)
@ Base.MainInclude ./client.jl:446
[14] top-level scope
@ none:1
in expression starting at /home/pkgeval/.julia/packages/LazyStack/QoKD8/src/LazyStack.jl:351
in expression starting at /home/pkgeval/.julia/packages/LazyStack/QoKD8/src/LazyStack.jl:1
ERROR: LoadError: LoadError: Failed to precompile LazyStack [1fad7336-0346-5a1a-a56f-a06ba010965b] to /home/pkgeval/.julia/compiled/v1.6/LazyStack/gHIQl_zV9El.ji.
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:33
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::Base.PipeEndpoint, internal_stdout::Base.PipeEndpoint)
@ Base ./loading.jl:1360
[3] compilecache(pkg::Base.PkgId, path::String)
@ Base ./loading.jl:1313
[4] _require(pkg::Base.PkgId)
@ Base ./loading.jl:1033
[5] require(uuidkey::Base.PkgId)
@ Base ./loading.jl:926
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:913
[7] include(mod::Module, _path::String)
@ Base ./Base.jl:389
[8] include(x::String)
@ AxisKeys ~/.julia/packages/AxisKeys/TSTM2/src/AxisKeys.jl:1
[9] top-level scope
@ ~/.julia/packages/AxisKeys/TSTM2/src/AxisKeys.jl:28
[10] include
@ ./Base.jl:389 [inlined]
[11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::String)
@ Base ./loading.jl:1225
[12] top-level scope
@ none:1
[13] eval
@ ./boot.jl:360 [inlined]
[14] eval(x::Expr)
@ Base.MainInclude ./client.jl:446
[15] top-level scope
@ none:1
in expression starting at /home/pkgeval/.julia/packages/AxisKeys/TSTM2/src/stack.jl:2
in expression starting at /home/pkgeval/.julia/packages/AxisKeys/TSTM2/src/AxisKeys.jl:1
ERROR: LoadError: Failed to precompile AxisKeys [94b1ba4f-4ee9-5380-92f1-94cde586c3c5] to /home/pkgeval/.julia/compiled/v1.6/AxisKeys/bc5G1_jvyga.ji.
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:33
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::Base.PipeEndpoint, internal_stdout::Base.PipeEndpoint)
@ Base ./loading.jl:1360
[3] compilecache(pkg::Base.PkgId, path::String)
@ Base ./loading.jl:1313
[4] _require(pkg::Base.PkgId)
@ Base ./loading.jl:1033
[5] require(uuidkey::Base.PkgId)
@ Base ./loading.jl:926
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:913
[7] include(fname::String)
@ Base.MainInclude ./client.jl:444
[8] top-level scope
@ none:6
in expression starting at /home/pkgeval/.julia/packages/Impute/pCJnh/test/runtests.jl:2
ERROR: Package Impute errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1667
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:333
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:320
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:70 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:69 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66
[11] top-level scope
@ none:31