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1.5.0-DEV-07b72375e2.log
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Julia Version 1.5.0-DEV.633
Commit 07b72375e2 (2020-04-15 15:23 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed Missings ───────────────────── v0.4.3
Installed x264_jll ───────────────────── v2019.5.25+1
Installed FFMPEG_jll ─────────────────── v4.1.0+2
Installed Ogg_jll ────────────────────── v1.3.3+0
Installed Measures ───────────────────── v0.3.1
Installed StaticArrays ───────────────── v0.12.1
Installed JSON ───────────────────────── v0.21.0
Installed Laplacians ─────────────────── v1.1.1
Installed LibVPX_jll ─────────────────── v1.8.1+1
Installed Arpack_jll ─────────────────── v3.5.0+3
Installed PlotThemes ─────────────────── v1.0.3
Installed libfdk_aac_jll ─────────────── v0.1.6+1
Installed LAME_jll ───────────────────── v3.100.0+0
Installed NaNMath ────────────────────── v0.3.3
Installed ColorTypes ─────────────────── v0.10.0
Installed Contour ────────────────────── v0.5.2
Installed RandomV06 ──────────────────── v0.0.2
Installed Requires ───────────────────── v1.0.1
Installed x265_jll ───────────────────── v3.0.0+0
Installed DataStructures ─────────────── v0.17.12
Installed StatsBase ──────────────────── v0.33.0
Installed FFMPEG ─────────────────────── v0.3.0
Installed Reexport ───────────────────── v0.2.0
Installed RecipesBase ────────────────── v1.0.0
Installed SortingAlgorithms ──────────── v0.3.1
Installed OpenBLAS_jll ───────────────── v0.3.9+2
Installed Zlib_jll ───────────────────── v1.2.11+9
Installed Showoff ────────────────────── v0.3.1
Installed Bzip2_jll ──────────────────── v1.0.6+2
Installed PlotUtils ──────────────────── v0.6.5
Installed FixedPointNumbers ──────────── v0.8.0
Installed GeometryTypes ──────────────── v0.8.2
Installed FriBidi_jll ────────────────── v1.0.5+2
Installed FreeType2_jll ──────────────── v2.10.1+2
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed Opus_jll ───────────────────── v1.3.1+0
Installed OrderedCollections ─────────── v1.1.0
Installed Parsers ────────────────────── v1.0.1
Installed GR ─────────────────────────── v0.48.0
Installed Colors ─────────────────────── v0.12.0
Installed OpenSSL_jll ────────────────── v1.1.1+2
Installed DataAPI ────────────────────── v1.1.0
Installed libass_jll ─────────────────── v0.14.0+1
Installed Arpack ─────────────────────── v0.4.0
Installed libvorbis_jll ──────────────── v1.3.6+2
Installed RecipesPipeline ────────────── v0.1.3
Installed Plots ──────────────────────── v1.0.10
Updating `~/.julia/environments/v1.5/Project.toml`
[6f8e5838] + Laplacians v1.1.1
Updating `~/.julia/environments/v1.5/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+3
[6e34b625] + Bzip2_jll v1.0.6+2
[3da002f7] + ColorTypes v0.10.0
[5ae59095] + Colors v0.12.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[d38c429a] + Contour v0.5.2
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.12
[c87230d0] + FFMPEG v0.3.0
[b22a6f82] + FFMPEG_jll v4.1.0+2
[53c48c17] + FixedPointNumbers v0.8.0
[d7e528f0] + FreeType2_jll v2.10.1+2
[559328eb] + FriBidi_jll v1.0.5+2
[28b8d3ca] + GR v0.48.0
[4d00f742] + GeometryTypes v0.8.2
[682c06a0] + JSON v0.21.0
[c1c5ebd0] + LAME_jll v3.100.0+0
[6f8e5838] + Laplacians v1.1.1
[dd192d2f] + LibVPX_jll v1.8.1+1
[442fdcdd] + Measures v0.3.1
[e1d29d7a] + Missings v0.4.3
[77ba4419] + NaNMath v0.3.3
[e7412a2a] + Ogg_jll v1.3.3+0
[4536629a] + OpenBLAS_jll v0.3.9+2
[458c3c95] + OpenSSL_jll v1.1.1+2
[91d4177d] + Opus_jll v1.3.1+0
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v1.0.1
[ccf2f8ad] + PlotThemes v1.0.3
[995b91a9] + PlotUtils v0.6.5
[91a5bcdd] + Plots v1.0.10
[3639840a] + RandomV06 v0.0.2
[3cdcf5f2] + RecipesBase v1.0.0
[01d81517] + RecipesPipeline v0.1.3
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[992d4aef] + Showoff v0.3.1
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.33.0
[83775a58] + Zlib_jll v1.2.11+9
[0ac62f75] + libass_jll v0.14.0+1
[f638f0a6] + libfdk_aac_jll v0.1.6+1
[f27f6e37] + libvorbis_jll v1.3.6+2
[1270edf5] + x264_jll v2019.5.25+1
[dfaa095f] + x265_jll v3.0.0+0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building GR ───→ `~/.julia/packages/GR/yMV3y/deps/build.log`
Building Plots → `~/.julia/packages/Plots/ZRCUN/deps/build.log`
Testing Laplacians
Status `/tmp/jl_zDtVsd/Project.toml`
[7d9fca2a] Arpack v0.4.0
[864edb3b] DataStructures v0.17.12
[6f8e5838] Laplacians v1.1.1
[91a5bcdd] Plots v1.0.10
[3639840a] RandomV06 v0.0.2
[8bb1440f] DelimitedFiles
[37e2e46d] LinearAlgebra
[de0858da] Printf
[9a3f8284] Random
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
Status `/tmp/jl_zDtVsd/Manifest.toml`
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+3
[6e34b625] Bzip2_jll v1.0.6+2
[3da002f7] ColorTypes v0.10.0
[5ae59095] Colors v0.12.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[d38c429a] Contour v0.5.2
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.12
[c87230d0] FFMPEG v0.3.0
[b22a6f82] FFMPEG_jll v4.1.0+2
[53c48c17] FixedPointNumbers v0.8.0
[d7e528f0] FreeType2_jll v2.10.1+2
[559328eb] FriBidi_jll v1.0.5+2
[28b8d3ca] GR v0.48.0
[4d00f742] GeometryTypes v0.8.2
[682c06a0] JSON v0.21.0
[c1c5ebd0] LAME_jll v3.100.0+0
[6f8e5838] Laplacians v1.1.1
[dd192d2f] LibVPX_jll v1.8.1+1
[442fdcdd] Measures v0.3.1
[e1d29d7a] Missings v0.4.3
[77ba4419] NaNMath v0.3.3
[e7412a2a] Ogg_jll v1.3.3+0
[4536629a] OpenBLAS_jll v0.3.9+2
[458c3c95] OpenSSL_jll v1.1.1+2
[91d4177d] Opus_jll v1.3.1+0
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v1.0.1
[ccf2f8ad] PlotThemes v1.0.3
[995b91a9] PlotUtils v0.6.5
[91a5bcdd] Plots v1.0.10
[3639840a] RandomV06 v0.0.2
[3cdcf5f2] RecipesBase v1.0.0
[01d81517] RecipesPipeline v0.1.3
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.33.0
[83775a58] Zlib_jll v1.2.11+9
[0ac62f75] libass_jll v0.14.0+1
[f638f0a6] libfdk_aac_jll v0.1.6+1
[f27f6e37] libvorbis_jll v1.3.6+2
[1270edf5] x264_jll v2019.5.25+1
[dfaa095f] x265_jll v3.0.0+0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
ERROR: LoadError: LoadError: MethodError: no method matching defaults(::Array{Array{UInt8,1},1})
Closest candidates are:
defaults(!Matched::Array{UInt8,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/SuiteSparse/src/cholmod.jl:77
Stacktrace:
[1] ask_cholmod(::SparseMatrixCSC{Float64,Int64}) at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/from_cholmod.jl:22
[2] augmentTreeOpt(::SparseMatrixCSC{Float64,Int64}, ::SparseMatrixCSC{Float64,Int64}; params::AugTreeParams) at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/augTreeSolver.jl:136
[3] augTreePrecon(::SparseMatrixCSC{Float64,Int64}; params::AugTreeParams) at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/augTreeSolver.jl:207
[4] augTreeSddm(::SparseMatrixCSC{Float64,Int64}; tol::Float64, maxits::Int64, maxtime::Float64, verbose::Bool, pcgIts::Array{Int64,1}, params::AugTreeParams) at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/augTreeSolver.jl:235
[5] #5 at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/isotonicIPM.jl:34 [inlined]
[6] l2NewtonStep(::SparseMatrixCSC{Float64,Int64}, ::Array{Float64,1}, ::Array{Float64,1}, ::Float64, ::var"#5#7") at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/isotonicIPM.jl:152
[7] isotonicIPM(::SparseMatrixCSC{Float64,Int64}, ::Array{Float64,1}, ::Float64, ::Function, ::Bool) at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/isotonicIPM.jl:95
[8] isotonicIPM(::SparseMatrixCSC{Float64,Int64}, ::Array{Float64,1}) at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/src/isotonicIPM.jl:36
[9] top-level scope at ./timing.jl:174
[10] include(::String) at ./client.jl:442
[11] top-level scope at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/test/runtests.jl:11
[12] include(::String) at ./client.jl:442
[13] top-level scope at none:6
in expression starting at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/test/testIncludes.jl:76
in expression starting at /home/pkgeval/.julia/packages/Laplacians/K6Pgk/test/runtests.jl:11
ERROR: Package Laplacians errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:52
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1516
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:316
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:303
[5] #test#68 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[7] #test#67 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[11] top-level scope at none:16