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1.6.0-DEV-22b5d93b2b.log
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Julia Version 1.6.0-DEV.1069
Commit 22b5d93b2b (2020-09-28 17:33 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed SortingAlgorithms ─────────── v0.3.1
Installed InvertedIndices ───────────── v1.0.0
Installed Requires ──────────────────── v1.0.3
Installed Missings ──────────────────── v0.4.4
Installed Compat ────────────────────── v3.17.0
Installed PlotAxes ──────────────────── v0.2.7
Installed StructTypes ───────────────── v1.1.0
Installed DataStructures ────────────── v0.18.6
Installed Tables ────────────────────── v1.0.5
Installed EllipsisNotation ──────────── v0.4.0
Installed DataValueInterfaces ───────── v1.0.0
Installed PooledArrays ──────────────── v0.5.3
Installed Parsers ───────────────────── v1.0.10
Installed TableTraits ───────────────── v1.0.0
Installed IntervalSets ──────────────── v0.5.1
Installed AxisArrays ────────────────── v0.4.3
Installed OrderedCollections ────────── v1.3.1
Installed DataAPI ───────────────────── v1.3.0
Installed RangeArrays ───────────────── v0.3.2
Installed Reexport ──────────────────── v0.2.0
Installed JSON ──────────────────────── v0.21.1
Installed IterTools ─────────────────── v1.3.0
Installed CategoricalArrays ─────────── v0.8.3
Installed DataFrames ────────────────── v0.21.7
Installed IteratorInterfaceExtensions ─ v1.0.0
Updating `~/.julia/environments/v1.6/Project.toml`
[8b6f5f00] + PlotAxes v0.2.7
Updating `~/.julia/environments/v1.6/Manifest.toml`
[39de3d68] + AxisArrays v0.4.3
[324d7699] + CategoricalArrays v0.8.3
[34da2185] + Compat v3.17.0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.7
[864edb3b] + DataStructures v0.18.6
[e2d170a0] + DataValueInterfaces v1.0.0
[da5c29d0] + EllipsisNotation v0.4.0
[8197267c] + IntervalSets v0.5.1
[41ab1584] + InvertedIndices v1.0.0
[c8e1da08] + IterTools v1.3.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.1
[e1d29d7a] + Missings v0.4.4
[bac558e1] + OrderedCollections v1.3.1
[69de0a69] + Parsers v1.0.10
[8b6f5f00] + PlotAxes v0.2.7
[2dfb63ee] + PooledArrays v0.5.3
[b3c3ace0] + RangeArrays v0.3.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.3
[a2af1166] + SortingAlgorithms v0.3.1
[856f2bd8] + StructTypes v1.1.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.5
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building PlotAxes → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/4bce3c5acbf1aa6e65c1635ef954f41b4aff512d/build.log`
Testing PlotAxes
┌ Error: Pkg.Resolve.ResolverError("Unsatisfiable requirements detected for package Gadfly [c91e804a]:\n Gadfly [c91e804a] log:\n ├─possible versions are: 0.8.0-1.3.0 or uninstalled\n ├─restricted to versions * by an explicit requirement, leaving only versions 0.8.0-1.3.0\n ├─restricted by compatibility requirements with Requires [ae029012] to versions: [0.8.0, 1.1.0-1.3.0] or uninstalled, leaving only versions: [0.8.0, 1.1.0-1.3.0]\n │ └─Requires [ae029012] log:\n │ ├─possible versions are: 0.5.0-1.0.3 or uninstalled\n │ └─restricted to versions 1.0.3 by an explicit requirement, leaving only versions 1.0.3\n └─restricted by compatibility requirements with DataStructures [864edb3b] to versions: uninstalled — no versions left\n └─DataStructures [864edb3b] log:\n ├─possible versions are: 0.9.0-0.18.6 or uninstalled\n └─restricted to versions 0.18.6 by an explicit requirement, leaving only versions 0.18.6", nothing)
└ @ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1457
Status `/tmp/jl_QfFN51/Project.toml`
[39de3d68] AxisArrays v0.4.3
[8f4d0f93] Conda v1.4.1
[c91e804a] Gadfly v1.3.0
[8b6f5f00] PlotAxes v0.2.7
[6f49c342] RCall v0.13.8
[1986cc42] Unitful v1.4.1
[112f6efa] VegaLite v2.3.0
[ade2ca70] Dates
[8dfed614] Test
Status `/tmp/jl_QfFN51/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[4fba245c] ArrayInterface v2.13.3
[13072b0f] AxisAlgorithms v1.0.0
[39de3d68] AxisArrays v0.4.3
[b99e7846] BinaryProvider v0.5.10
[49dc2e85] Calculus v0.5.1
[324d7699] CategoricalArrays v0.8.3
[3da002f7] ColorTypes v0.10.9
[5ae59095] Colors v0.12.4
[bbf7d656] CommonSubexpressions v0.3.0
[34da2185] Compat v3.17.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[a81c6b42] Compose v0.8.2
[8f4d0f93] Conda v1.4.1
[187b0558] ConstructionBase v1.0.0
[d38c429a] Contour v0.5.5
[7ad07ef1] CoupledFields v0.2.0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.7
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[e7dc6d0d] DataValues v0.4.13
[01453d9d] DiffEqDiffTools v1.7.0
[163ba53b] DiffResults v1.0.2
[b552c78f] DiffRules v1.0.1
[b4f34e82] Distances v0.9.0
[31c24e10] Distributions v0.23.8
[ffbed154] DocStringExtensions v0.8.3
[da5c29d0] EllipsisNotation v0.4.0
[7a1cc6ca] FFTW v1.2.4
[f5851436] FFTW_jll v3.3.9+5
[5789e2e9] FileIO v1.4.3
[8fc22ac5] FilePaths v0.8.1
[48062228] FilePathsBase v0.9.5
[1a297f60] FillArrays v0.8.14
[53c48c17] FixedPointNumbers v0.8.4
[f6369f11] ForwardDiff v0.10.12
[c91e804a] Gadfly v1.3.0
[c27321d9] Glob v1.3.0
[42e2da0e] Grisu v1.0.0
[cd3eb016] HTTP v0.8.19
[a1b4810d] Hexagons v0.2.0
[9b13fd28] IndirectArrays v0.5.1
[83e8ac13] IniFile v0.5.0
[1d5cc7b8] IntelOpenMP_jll v2018.0.3+0
[a98d9a8b] Interpolations v0.12.10
[8197267c] IntervalSets v0.5.1
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[7d188eb4] JSONSchema v0.2.0
[e5e0dc1b] Juno v0.8.4
[5ab0869b] KernelDensity v0.5.1
[d3d80556] LineSearches v7.1.0
[4345ca2d] Loess v0.5.0
[856f044c] MKL_jll v2020.2.254+0
[1914dd2f] MacroTools v0.5.5
[739be429] MbedTLS v1.0.2
[c8ffd9c3] MbedTLS_jll v2.16.8+0
[442fdcdd] Measures v0.3.1
[e89f7d12] Media v0.5.0
[e1d29d7a] Missings v0.4.4
[d41bc354] NLSolversBase v7.5.0
[77ba4419] NaNMath v0.3.4
[2bd173c7] NodeJS v1.1.1
[6fe1bfb0] OffsetArrays v1.3.0
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[429524aa] Optim v0.22.0
[bac558e1] OrderedCollections v1.3.1
[90014a1f] PDMats v0.10.1
[d96e819e] Parameters v0.12.1
[69de0a69] Parsers v1.0.10
[8b6f5f00] PlotAxes v0.2.7
[2dfb63ee] PooledArrays v0.5.3
[85a6dd25] PositiveFactorizations v0.2.3
[1fd47b50] QuadGK v2.4.1
[6f49c342] RCall v0.13.8
[b3c3ace0] RangeArrays v0.3.2
[c84ed2f1] Ratios v0.4.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.3
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[efcf1570] Setfield v0.6.0
[1277b4bf] ShiftedArrays v1.0.0
[992d4aef] Showoff v0.3.2
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.33.1
[4c63d2b9] StatsFuns v0.9.5
[3eaba693] StatsModels v0.6.14
[856f2bd8] StructTypes v1.1.0
[3783bdb8] TableTraits v1.0.0
[382cd787] TableTraitsUtils v1.0.1
[bd369af6] Tables v1.0.5
[30578b45] URIParser v0.4.1
[3a884ed6] UnPack v1.0.2
[1986cc42] Unitful v1.4.1
[239c3e63] Vega v2.0.0
[112f6efa] VegaLite v2.3.0
[81def892] VersionParsing v1.2.0
[1b915085] WinReg v0.3.1
[efce3f68] WoodburyMatrices v0.5.2
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[9abbd945] Profile
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
Can generate plotable data: Test Failed at /home/pkgeval/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:56
Expression: :logb in propertynames(df)
Evaluated: logb in [:value, :a, Symbol("typename(log)b")]
Stacktrace:
[1] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:56
[2] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[3] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:28
[4] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[5] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:27
Can generate plotable data: Error During Test at /home/pkgeval/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:57
Test threw exception
Expression: sort(unique(df.logb)) ≈ range(0, 1, length = 10)
ArgumentError: column name :logb not found in the data frame
Stacktrace:
[1] lookupname
@ ~/.julia/packages/DataFrames/cdZCk/src/other/index.jl:286 [inlined]
[2] getindex
@ ~/.julia/packages/DataFrames/cdZCk/src/other/index.jl:295 [inlined]
[3] getindex(df::DataFrames.DataFrame, #unused#::typeof(!), col_ind::Symbol)
@ DataFrames ~/.julia/packages/DataFrames/cdZCk/src/dataframe/dataframe.jl:435
[4] getproperty(df::DataFrames.DataFrame, col_ind::Symbol)
@ DataFrames ~/.julia/packages/DataFrames/cdZCk/src/abstractdataframe/abstractdataframe.jl:346
[5] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:57
[6] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[7] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:28
[8] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[9] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:27
Can generate plotable data: Test Failed at /home/pkgeval/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:63
Expression: :loga in propertynames(df)
Evaluated: loga in [:value, Symbol("typename(log)a"), :b]
Stacktrace:
[1] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:63
[2] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[3] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:28
[4] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[5] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:27
Can generate plotable data: Error During Test at /home/pkgeval/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:64
Test threw exception
Expression: sort(unique(df.loga)) ≈ range(0, 1, length = 10)
ArgumentError: column name :loga not found in the data frame
Stacktrace:
[1] lookupname
@ ~/.julia/packages/DataFrames/cdZCk/src/other/index.jl:286 [inlined]
[2] getindex
@ ~/.julia/packages/DataFrames/cdZCk/src/other/index.jl:295 [inlined]
[3] getindex(df::DataFrames.DataFrame, #unused#::typeof(!), col_ind::Symbol)
@ DataFrames ~/.julia/packages/DataFrames/cdZCk/src/dataframe/dataframe.jl:435
[4] getproperty(df::DataFrames.DataFrame, col_ind::Symbol)
@ DataFrames ~/.julia/packages/DataFrames/cdZCk/src/abstractdataframe/abstractdataframe.jl:346
[5] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:64
[6] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[7] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:28
[8] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[9] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:27
Can generate plotable data: Test Failed at /home/pkgeval/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:92
Expression: PlotAxes.asplotable(data, quantize = (3,))
Expected: ErrorException("Cannot quantize non-numeric value of type Tuple{Int64,Int64}.")
Thrown: ErrorException("Cannot quantize non-numeric value of type Tuple{Int64, Int64}.")
Stacktrace:
[1] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:92
[2] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[3] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:28
[4] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[5] top-level scope
@ ~/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:27
[ Info: Loading Gadfly backend for `PlotAxes`
[ Info: Loading VegaLite backend for `PlotAxes`
[ Info: Loading RCall ggplot2 backend for `PlotAxes`
┌ Warning: RCall.jl: Registered S3 methods overwritten by 'ggplot2':
│ method from
│ [.quosures rlang
│ c.quosures rlang
│ print.quosures rlang
└ @ RCall ~/.julia/packages/RCall/Xq1xc/src/io.jl:160
Backend ggplot2: Error During Test at /home/pkgeval/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:142
Got exception outside of a @test
REvalError: Error in parse(text = x) : <text>:1:14: unexpected symbol
1: typename(log)a
^
Calls: ggplot ... lapply -> FUN -> <Anonymous> -> parse_exprs -> parse
Test Summary: | Pass Fail Error Total
PlotAxes | 60 3 3 66
Can generate plotable data | 26 3 2 31
Can use backends | 34 1 35
Backend ggplot2 | 1 1 2
Backend gadfly | 14 14
Backend vegalite | 14 14
ERROR: LoadError: Some tests did not pass: 60 passed, 3 failed, 3 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/PlotAxes/XKjM4/test/runtests.jl:25
ERROR: Package PlotAxes errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1609
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:331
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:318
[5] #test#62
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[6] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[7] #test#61
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:19