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1.6.0-DEV-22b5d93b2b.log
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Julia Version 1.6.0-DEV.1069
Commit 22b5d93b2b (2020-09-28 17:33 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed SimpleTraits ───────────────── v0.9.3
Installed Zlib_jll ───────────────────── v1.2.11+16
Installed OpenJpeg_jll ───────────────── v2.3.1+0
Installed QuadGK ─────────────────────── v2.4.1
Installed PCRE_jll ───────────────────── v8.42.0+3
Installed Libmount_jll ───────────────── v2.34.0+2
Installed TikzPictures ───────────────── v3.3.0
Installed CodecZlib ──────────────────── v0.7.0
Installed libpng_jll ─────────────────── v1.6.37+5
Installed DataStructures ─────────────── v0.18.6
Installed Missings ───────────────────── v0.4.4
Installed Cairo_jll ──────────────────── v1.16.0+5
Installed CausalInference ────────────── v0.5.4
Installed Xorg_libxcb_jll ────────────── v1.13.0+2
Installed Libuuid_jll ────────────────── v2.34.0+6
Installed Libffi_jll ─────────────────── v3.2.1+3
Installed Gettext_jll ────────────────── v0.20.1+6
Installed XSLT_jll ───────────────────── v1.1.33+3
Installed Compat ─────────────────────── v3.17.0
Installed Zstd_jll ───────────────────── v1.4.5+1
Installed Glib_jll ───────────────────── v2.59.0+3
Installed Xorg_libXext_jll ───────────── v1.3.4+3
Installed LittleCMS_jll ──────────────── v2.9.0+0
Installed MetaGraphs ─────────────────── v0.6.6
Installed SortingAlgorithms ──────────── v0.3.1
Installed LZO_jll ────────────────────── v2.10.0+2
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed Requires ───────────────────── v1.0.3
Installed Libgpg_error_jll ───────────── v1.36.0+2
Installed Fontconfig_jll ─────────────── v2.13.1+13
Installed TranscodingStreams ─────────── v0.9.5
Installed Rmath_jll ──────────────────── v0.2.2+1
Installed TikzGraphs ─────────────────── v1.1.0
Installed Xorg_libXdmcp_jll ──────────── v1.1.3+3
Installed Libiconv_jll ───────────────── v1.16.0+6
Installed Tables ─────────────────────── v1.0.5
Installed FreeType2_jll ──────────────── v2.10.1+4
Installed Xorg_libX11_jll ────────────── v1.6.9+3
Installed Inflate ────────────────────── v0.1.2
Installed Pixman_jll ─────────────────── v0.38.4+4
Installed JLD2 ───────────────────────── v0.2.1
Installed DataValueInterfaces ────────── v1.0.0
Installed Distributions ──────────────── v0.23.12
Installed Distances ──────────────────── v0.9.0
Installed PDMats ─────────────────────── v0.10.1
Installed Xorg_libXau_jll ────────────── v1.0.9+3
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed SpecialFunctions ───────────── v0.10.3
Installed DataAPI ────────────────────── v1.3.0
Installed LaTeXStrings ───────────────── v1.2.0
Installed StaticArrays ───────────────── v0.12.4
Installed StatsBase ──────────────────── v0.33.1
Installed TableTraits ────────────────── v1.0.0
Installed OrderedCollections ─────────── v1.3.1
Installed XML2_jll ───────────────────── v2.9.10+2
Installed NearestNeighbors ───────────── v0.4.6
Installed Bzip2_jll ──────────────────── v1.0.6+4
Installed MacroTools ─────────────────── v0.5.5
Installed StatsFuns ──────────────────── v0.9.5
Installed Libtiff_jll ────────────────── v4.1.0+1
Installed FillArrays ─────────────────── v0.9.6
Installed Xorg_libpthread_stubs_jll ──── v0.1.0+2
Installed IteratorInterfaceExtensions ── v1.0.0
Installed Rmath ──────────────────────── v0.6.1
Installed Xorg_xtrans_jll ────────────── v1.4.0+2
Installed Expat_jll ──────────────────── v2.2.7+5
Installed ArnoldiMethod ──────────────── v0.0.4
Installed LightGraphs ────────────────── v1.3.0
Installed Combinatorics ──────────────── v1.0.2
Installed Libgcrypt_jll ──────────────── v1.8.5+3
Installed JpegTurbo_jll ──────────────── v2.0.1+2
Installed Xorg_libXrender_jll ────────── v0.9.10+3
Installed Poppler_jll ────────────────── v0.87.0+0
Updating `~/.julia/environments/v1.6/Project.toml`
[8e462317] + CausalInference v0.5.4
Updating `~/.julia/environments/v1.6/Manifest.toml`
[ec485272] + ArnoldiMethod v0.0.4
[6e34b625] + Bzip2_jll v1.0.6+4
[83423d85] + Cairo_jll v1.16.0+5
[8e462317] + CausalInference v0.5.4
[944b1d66] + CodecZlib v0.7.0
[861a8166] + Combinatorics v1.0.2
[34da2185] + Compat v3.17.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] + DataAPI v1.3.0
[864edb3b] + DataStructures v0.18.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.9.0
[31c24e10] + Distributions v0.23.12
[2e619515] + Expat_jll v2.2.7+5
[1a297f60] + FillArrays v0.9.6
[a3f928ae] + Fontconfig_jll v2.13.1+13
[d7e528f0] + FreeType2_jll v2.10.1+4
[78b55507] + Gettext_jll v0.20.1+6
[7746bdde] + Glib_jll v2.59.0+3
[d25df0c9] + Inflate v0.1.2
[82899510] + IteratorInterfaceExtensions v1.0.0
[033835bb] + JLD2 v0.2.1
[aacddb02] + JpegTurbo_jll v2.0.1+2
[dd4b983a] + LZO_jll v2.10.0+2
[b964fa9f] + LaTeXStrings v1.2.0
[e9f186c6] + Libffi_jll v3.2.1+3
[d4300ac3] + Libgcrypt_jll v1.8.5+3
[7add5ba3] + Libgpg_error_jll v1.36.0+2
[94ce4f54] + Libiconv_jll v1.16.0+6
[4b2f31a3] + Libmount_jll v2.34.0+2
[89763e89] + Libtiff_jll v4.1.0+1
[38a345b3] + Libuuid_jll v2.34.0+6
[093fc24a] + LightGraphs v1.3.0
[d3a379c0] + LittleCMS_jll v2.9.0+0
[1914dd2f] + MacroTools v0.5.5
[626554b9] + MetaGraphs v0.6.6
[e1d29d7a] + Missings v0.4.4
[b8a86587] + NearestNeighbors v0.4.6
[643b3616] + OpenJpeg_jll v2.3.1+0
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.3.1
[2f80f16e] + PCRE_jll v8.42.0+3
[90014a1f] + PDMats v0.10.1
[30392449] + Pixman_jll v0.38.4+4
[9c32591e] + Poppler_jll v0.87.0+0
[1fd47b50] + QuadGK v2.4.1
[ae029012] + Requires v1.0.3
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+1
[699a6c99] + SimpleTraits v0.9.3
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[90137ffa] + StaticArrays v0.12.4
[2913bbd2] + StatsBase v0.33.1
[4c63d2b9] + StatsFuns v0.9.5
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.5
[b4f28e30] + TikzGraphs v1.1.0
[37f6aa50] + TikzPictures v3.3.0
[3bb67fe8] + TranscodingStreams v0.9.5
[02c8fc9c] + XML2_jll v2.9.10+2
[aed1982a] + XSLT_jll v1.1.33+3
[4f6342f7] + Xorg_libX11_jll v1.6.9+3
[0c0b7dd1] + Xorg_libXau_jll v1.0.9+3
[a3789734] + Xorg_libXdmcp_jll v1.1.3+3
[1082639a] + Xorg_libXext_jll v1.3.4+3
[ea2f1a96] + Xorg_libXrender_jll v0.9.10+3
[14d82f49] + Xorg_libpthread_stubs_jll v0.1.0+2
[c7cfdc94] + Xorg_libxcb_jll v1.13.0+2
[c5fb5394] + Xorg_xtrans_jll v1.4.0+2
[83775a58] + Zlib_jll v1.2.11+16
[3161d3a3] + Zstd_jll v1.4.5+1
[b53b4c65] + libpng_jll v1.6.37+5
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing CausalInference
Status `/tmp/jl_xJv8Xc/Project.toml`
[8e462317] CausalInference v0.5.4
[861a8166] Combinatorics v1.0.2
[b4f34e82] Distances v0.9.0
[31c24e10] Distributions v0.23.12
[093fc24a] LightGraphs v1.3.0
[626554b9] MetaGraphs v0.6.6
[b8a86587] NearestNeighbors v0.4.6
[276daf66] SpecialFunctions v0.10.3
[bd369af6] Tables v1.0.5
[b4f28e30] TikzGraphs v1.1.0
[37e2e46d] LinearAlgebra
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_xJv8Xc/Manifest.toml`
[ec485272] ArnoldiMethod v0.0.4
[6e34b625] Bzip2_jll v1.0.6+4
[83423d85] Cairo_jll v1.16.0+5
[8e462317] CausalInference v0.5.4
[944b1d66] CodecZlib v0.7.0
[861a8166] Combinatorics v1.0.2
[34da2185] Compat v3.17.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] DataAPI v1.3.0
[864edb3b] DataStructures v0.18.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.9.0
[31c24e10] Distributions v0.23.12
[2e619515] Expat_jll v2.2.7+5
[1a297f60] FillArrays v0.9.6
[a3f928ae] Fontconfig_jll v2.13.1+13
[d7e528f0] FreeType2_jll v2.10.1+4
[78b55507] Gettext_jll v0.20.1+6
[7746bdde] Glib_jll v2.59.0+3
[d25df0c9] Inflate v0.1.2
[82899510] IteratorInterfaceExtensions v1.0.0
[033835bb] JLD2 v0.2.1
[aacddb02] JpegTurbo_jll v2.0.1+2
[dd4b983a] LZO_jll v2.10.0+2
[b964fa9f] LaTeXStrings v1.2.0
[e9f186c6] Libffi_jll v3.2.1+3
[d4300ac3] Libgcrypt_jll v1.8.5+3
[7add5ba3] Libgpg_error_jll v1.36.0+2
[94ce4f54] Libiconv_jll v1.16.0+6
[4b2f31a3] Libmount_jll v2.34.0+2
[89763e89] Libtiff_jll v4.1.0+1
[38a345b3] Libuuid_jll v2.34.0+6
[093fc24a] LightGraphs v1.3.0
[d3a379c0] LittleCMS_jll v2.9.0+0
[1914dd2f] MacroTools v0.5.5
[626554b9] MetaGraphs v0.6.6
[e1d29d7a] Missings v0.4.4
[b8a86587] NearestNeighbors v0.4.6
[643b3616] OpenJpeg_jll v2.3.1+0
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.3.1
[2f80f16e] PCRE_jll v8.42.0+3
[90014a1f] PDMats v0.10.1
[30392449] Pixman_jll v0.38.4+4
[9c32591e] Poppler_jll v0.87.0+0
[1fd47b50] QuadGK v2.4.1
[ae029012] Requires v1.0.3
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[699a6c99] SimpleTraits v0.9.3
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.33.1
[4c63d2b9] StatsFuns v0.9.5
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.5
[b4f28e30] TikzGraphs v1.1.0
[37f6aa50] TikzPictures v3.3.0
[3bb67fe8] TranscodingStreams v0.9.5
[02c8fc9c] XML2_jll v2.9.10+2
[aed1982a] XSLT_jll v1.1.33+3
[4f6342f7] Xorg_libX11_jll v1.6.9+3
[0c0b7dd1] Xorg_libXau_jll v1.0.9+3
[a3789734] Xorg_libXdmcp_jll v1.1.3+3
[1082639a] Xorg_libXext_jll v1.3.4+3
[ea2f1a96] Xorg_libXrender_jll v0.9.10+3
[14d82f49] Xorg_libpthread_stubs_jll v0.1.0+2
[c7cfdc94] Xorg_libxcb_jll v1.13.0+2
[c5fb5394] Xorg_xtrans_jll v1.4.0+2
[83775a58] Zlib_jll v1.2.11+16
[3161d3a3] Zstd_jll v1.4.5+1
[b53b4c65] libpng_jll v1.6.37+5
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
WARNING: could not import LaTeXStrings.@L_mstr into TikzPictures
Test Summary: | Pass Total
FCI utils | 7 7
Test Summary: | Pass Total
FCI Skeleton | 6 6
R0 with (1, 3, 2)
R1 with 1-3-4
R0 with (1, 2, 4)
R0 with (2, 4, 3)
R0 with (1, 4, 3)
R0 with (2, 4, 3)
R0 with (2, 3, 4)
R9: 2-3 with [2, 1, 4, 3]
R9: 4-3 with [4, 1, 2, 3]
Test Summary: | Pass Total
FCI Orientation | 9 9
Test Summary: | Pass Total
Entropy | 6 6
Test Summary: | Pass Total
Permutation tests | 3 3
Vertices: 10, Edges: 8
0.030797 seconds (3.92 k allocations: 253.000 KiB)
Using true correlation
0.001413 seconds (1.25 k allocations: 133.547 KiB)
num edges found 8 of 8, false edges 0
Using data (n = 10000)
0.000599 seconds (880 allocations: 75.172 KiB)
num edges found 8 of 8, false edges 0
Test Summary: | Pass Total
d10 | 6 6
Vertices: 23, Edges: 46
0.134338 seconds (523.71 k allocations: 33.889 MiB, 15.38% gc time)
Using true correlation
3.708670 seconds (1.45 M allocations: 383.783 MiB, 13.36% gc time)
num edges found 46 of 46, false edges 0
Using data (n = 100000)
0.170674 seconds (145.47 k allocations: 30.348 MiB, 3.10% gc time)
num edges found 40 of 46, false edges 1
Test Summary: | Pass Total
d23 | 6 6
Test Summary: | Pass Total
d5 | 2 2
0.341911 seconds (1.73 M allocations: 79.542 MiB, 10.56% gc time)
0.005313 seconds (14.98 k allocations: 1.667 MiB)
Test Summary: | Pass Total
truefalse | 2 2
Test Summary: | Pass Total
dsep g1 | 13 13
Test Summary: | Pass Total
dsep g2 | 6 6
Test Summary: | Pass Total
unshielded | 4 4
Running Gaussian tests
0.729471 seconds (592.95 k allocations: 34.749 MiB)
Running CMI tests
114.620898 seconds (189.00 M allocations: 30.870 GiB, 7.02% gc time)
Test Summary: | Pass Total
pcalg_edgde_test | 2 2
Test Summary: | Pass Total
chickering | 1 1
Test Summary: | Pass Total
randdag(0) | 2000 2000
Test Summary: | Pass Total
randdag(1) | 2000 2000
Test Summary: | Pass Total
randdag(2) | 2000 2000
Test Summary: | Pass Total
randdag(3) | 2000 2000
Test Summary: | Pass Total
randdag(4) | 2000 2000
Test Summary: | Pass Total
randdag(5) | 2000 2000
Test Summary: | Pass Total
randdag(6) | 2000 2000
Test Summary: | Pass Total
randdag(7) | 2000 2000
Test Summary: | Pass Total
randdag(8) | 2000 2000
Test Summary: | Pass Total
randdag(9) | 2000 2000
Test Summary: | Pass Total
randdag(10) | 2000 2000
Test Summary: | Pass Total
randdag(50) | 2 2
Test Summary: | Pass Total
orient after v structre | 2 2
Test Summary: | Pass Total
check that edge is still undirected | 2 2
Test Summary: | Pass Total
combinations | 150 150
Testing CausalInference tests passed