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1.6.0-DEV-22b5d93b2b.log
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1.6.0-DEV-22b5d93b2b.log
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Julia Version 1.6.0-DEV.1069
Commit 22b5d93b2b (2020-09-28 17:33 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed CodecZlib ────────── v0.7.0
Installed IniFile ──────────── v0.5.0
Installed Zlib_jll ─────────── v1.2.11+16
Installed PropertyDicts ────── v0.1.0
Installed BigArrays ────────── v1.3.0
Installed ExprTools ────────── v0.1.2
Installed OffsetArrays ─────── v1.3.0
Installed GoogleCloud ──────── v0.8.1
Installed Zstd_jll ─────────── v1.4.5+1
Installed MsgPack ──────────── v1.1.0
Installed Blosc_jll ────────── v1.14.3+1
Installed Compat ───────────── v3.17.0
Installed CodecZstd ────────── v0.7.0
Installed TranscodingStreams ─ v0.9.5
Installed Libz ─────────────── v1.0.1
Installed LazyJSON ─────────── v0.2.2
Installed EzXML ────────────── v1.1.0
Installed Libiconv_jll ─────── v1.16.0+6
Installed Retry ────────────── v0.4.1
Installed HTTP ─────────────── v0.8.19
Installed BufferedStreams ──── v1.0.0
Installed AWSCore ──────────── v0.6.15
Installed SymDict ──────────── v0.3.0
Installed Mocking ──────────── v0.7.1
Installed Parsers ──────────── v1.0.10
Installed AWSS3 ────────────── v0.7.2
Installed FilePathsBase ────── v0.9.5
Installed OrderedCollections ─ v1.3.1
Installed XML2_jll ─────────── v2.9.10+2
Installed IterTools ────────── v1.3.0
Installed JSON ─────────────── v0.21.1
Installed BinaryProvider ───── v0.5.10
Installed MbedTLS ──────────── v0.6.8
Installed Blosc ────────────── v0.7.0
Installed XMLDict ──────────── v0.4.1
Installed Lz4_jll ──────────── v1.9.2+2
Updating `~/.julia/environments/v1.6/Project.toml`
[c2a8506f] + BigArrays v1.3.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[4f1ea46c] + AWSCore v0.6.15
[1c724243] + AWSS3 v0.7.2
[c2a8506f] + BigArrays v1.3.0
[b99e7846] + BinaryProvider v0.5.10
[a74b3585] + Blosc v0.7.0
[0b7ba130] + Blosc_jll v1.14.3+1
[e1450e63] + BufferedStreams v1.0.0
[944b1d66] + CodecZlib v0.7.0
[6b39b394] + CodecZstd v0.7.0
[34da2185] + Compat v3.17.0
[e2ba6199] + ExprTools v0.1.2
[8f5d6c58] + EzXML v1.1.0
[48062228] + FilePathsBase v0.9.5
[55e21f81] + GoogleCloud v0.8.1
[cd3eb016] + HTTP v0.8.19
[83e8ac13] + IniFile v0.5.0
[c8e1da08] + IterTools v1.3.0
[682c06a0] + JSON v0.21.1
[fc18253b] + LazyJSON v0.2.2
[94ce4f54] + Libiconv_jll v1.16.0+6
[2ec943e9] + Libz v1.0.1
[5ced341a] + Lz4_jll v1.9.2+2
[739be429] + MbedTLS v0.6.8
[78c3b35d] + Mocking v0.7.1
[99f44e22] + MsgPack v1.1.0
[6fe1bfb0] + OffsetArrays v1.3.0
[bac558e1] + OrderedCollections v1.3.1
[69de0a69] + Parsers v1.0.10
[f8a19df8] + PropertyDicts v0.1.0
[20febd7b] + Retry v0.4.1
[2da68c74] + SymDict v0.3.0
[3bb67fe8] + TranscodingStreams v0.9.5
[02c8fc9c] + XML2_jll v2.9.10+2
[228000da] + XMLDict v0.4.1
[83775a58] + Zlib_jll v1.2.11+16
[3161d3a3] + Zstd_jll v1.4.5+1
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building MbedTLS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/2d94286a9c2f52c63a16146bb86fd6cdfbf677c6/build.log`
Testing BigArrays
Status `/tmp/jl_DWOQ3c/Project.toml`
[4f1ea46c] AWSCore v0.6.15
[1c724243] AWSS3 v0.7.2
[c2a8506f] BigArrays v1.3.0
[a74b3585] Blosc v0.7.0
[944b1d66] CodecZlib v0.7.0
[6b39b394] CodecZstd v0.7.0
[55e21f81] GoogleCloud v0.8.1
[cd3eb016] HTTP v0.8.19
[682c06a0] JSON v0.21.1
[6fe1bfb0] OffsetArrays v1.3.0
[3bb67fe8] TranscodingStreams v0.9.5
[8ba89e20] Distributed
[8dfed614] Test
Status `/tmp/jl_DWOQ3c/Manifest.toml`
[4f1ea46c] AWSCore v0.6.15
[1c724243] AWSS3 v0.7.2
[c2a8506f] BigArrays v1.3.0
[b99e7846] BinaryProvider v0.5.10
[a74b3585] Blosc v0.7.0
[0b7ba130] Blosc_jll v1.14.3+1
[e1450e63] BufferedStreams v1.0.0
[944b1d66] CodecZlib v0.7.0
[6b39b394] CodecZstd v0.7.0
[34da2185] Compat v3.17.0
[e2ba6199] ExprTools v0.1.2
[8f5d6c58] EzXML v1.1.0
[48062228] FilePathsBase v0.9.5
[55e21f81] GoogleCloud v0.8.1
[cd3eb016] HTTP v0.8.19
[83e8ac13] IniFile v0.5.0
[c8e1da08] IterTools v1.3.0
[682c06a0] JSON v0.21.1
[fc18253b] LazyJSON v0.2.2
[94ce4f54] Libiconv_jll v1.16.0+6
[2ec943e9] Libz v1.0.1
[5ced341a] Lz4_jll v1.9.2+2
[739be429] MbedTLS v0.6.8
[78c3b35d] Mocking v0.7.1
[99f44e22] MsgPack v1.1.0
[6fe1bfb0] OffsetArrays v1.3.0
[bac558e1] OrderedCollections v1.3.1
[69de0a69] Parsers v1.0.10
[f8a19df8] PropertyDicts v0.1.0
[20febd7b] Retry v0.4.1
[2da68c74] SymDict v0.3.0
[3bb67fe8] TranscodingStreams v0.9.5
[02c8fc9c] XML2_jll v2.9.10+2
[228000da] XMLDict v0.4.1
[83775a58] Zlib_jll v1.2.11+16
[3161d3a3] Zstd_jll v1.4.5+1
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
┌ Warning: did not find AWS credential! set it in environment variables.
└ @ BigArrays.S3Dicts ~/.julia/packages/BigArrays/aB3lD/src/backends/S3Dicts.jl:23
Test Summary: | Pass Total
test index transformation | 2 2
layerDir = "/tmp/jl_YgbYE5"
path = "/tmp/jl_MUeDIO"
Test Summary: |
test bigarray construction | No tests
path = "/tmp/jl_YgbYE5"
a = UInt8[0x0e, 0x9e, 0x14, 0xa5, 0x5e, 0xf5, 0x26, 0x8c, 0x44, 0x30, 0x0f, 0xb4, 0xe1, 0xfb, 0x00, 0x48, 0xa7, 0x02, 0x58, 0x46]
b = UInt8[0x0e, 0x9e, 0x14, 0xa5, 0x5e, 0xf5, 0x26, 0x8c, 0x44, 0x30, 0x0f, 0xb4, 0xe1, 0xfb, 0x00, 0x48, 0xa7, 0x02, 0x58, 0x46]
Test Summary: | Pass Total
test BinDict | 3 3
path = "/tmp/jl_YgbYE5"
info: Info{UInt8}("", 1, BigArrays.Infos.InfoScales.InfoScale[Symbol("6_6_30"), Symbol("12_12_30")], "", :image)
┌ Warning: `one(i::CartesianIndex)` is deprecated, use `oneunit(i)` instead.
│ caller = global_range2buffer_range(globalRange::CartesianIndices{3, Tuple{UnitRange{Int64}, UnitRange{Int64}, UnitRange{Int64}}}, bufferGlobalRange::CartesianIndices{3, Tuple{UnitRange{Int64}, UnitRange{Int64}, UnitRange{Int64}}}) at Indexes.jl:20
└ @ BigArrays.Indexes ~/.julia/packages/BigArrays/aB3lD/src/Indexes.jl:20
┌ Warning: `one(i::CartesianIndex)` is deprecated, use `oneunit(i)` instead.
│ caller = global_range2buffer_range(globalRange::CartesianIndices{3, Tuple{UnitRange{Int64}, UnitRange{Int64}, UnitRange{Int64}}}, bufferGlobalRange::CartesianIndices{3, Tuple{UnitRange{Int64}, UnitRange{Int64}, UnitRange{Int64}}}) at Indexes.jl:21
└ @ BigArrays.Indexes ~/.julia/packages/BigArrays/aB3lD/src/Indexes.jl:21
┌ Warning: `one(I::Type{CartesianIndex{N}}) where N` is deprecated, use `oneunit(I)` instead.
│ caller = CartesianIndices at type.jl:158 [inlined]
└ @ Core ~/.julia/packages/BigArrays/aB3lD/src/type.jl:158
┌ Warning: `one(i::CartesianIndex)` is deprecated, use `oneunit(i)` instead.
│ caller = getindex_sequential(::BigArray{BinDict, UInt8}, ::UnitRange{Int64}, ::Vararg{UnitRange{Int64}, N} where N) at sequential.jl:40
└ @ BigArrays ~/.julia/packages/BigArrays/aB3lD/src/modes/sequential.jl:40
cutout speed: 0.31335149596941847 MB/s
Test Summary: | Pass Total
test file protocol | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 0.3747235828071199 MB/s
┌ Warning: `one(I::Type{CartesianIndex{N}}) where N` is deprecated, use `oneunit(I)` instead.
│ caller = CartesianIndices at type.jl:158 [inlined]
└ @ Core ~/.julia/packages/BigArrays/aB3lD/src/type.jl:158
┌ Warning: `one(I::Type{CartesianIndex{N}}) where N` is deprecated, use `oneunit(I)` instead.
│ caller = getindex_multithreads_worker!(chan::Channel{Tuple}, buf::Array{UInt8, 3}, ba::BigArray{BinDict, UInt8}) at multithreads.jl:79
└ @ BigArrays ~/.julia/packages/BigArrays/aB3lD/src/modes/multithreads.jl:79
cutout speed: 0.5309597661918669 MB/s
Test Summary: | Pass Total
test IO of BigArray with backend of BinDict | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 1.0261649025577217 MB/s
cutout speed: 2.6435005697156773 MB/s
Test Summary: | Pass Total
test negative coordinate | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 4.945919461883962 MB/s
cutout speed: 7.851912922285692 MB/s
Test Summary: | Pass Total
test aligned IO crossing the volume boundary | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 4.122076389725892 MB/s
cutout speed: 5.5728032109226255 MB/s
Test Summary: | Pass Total
test nonaligned IO crossing the volume boundary | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 0.7662343508606249 MB/s
cutout speed: 0.4896236507808273 MB/s
Test Summary: | Pass Total
test IO of BigArray with backend of BinDict with zstd compression | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 1.79514480647778 MB/s
cutout speed: 1.8347550773979961 MB/s
Test Summary: | Pass Total
test IO of BigArray with backend of BinDict with blosclz compression | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 1.1240730788010356 MB/s
cutout speed: 2.515047054958494 MB/s
Test Summary: | Pass Total
test dataset not aligned starting from 0 | 1 1
path = "/tmp/jl_YgbYE5"
saving speed: 1.4829740674178549 MB/s
cutout speed: 2.5514149988119974 MB/s
Test Summary: | Pass Total
test dataset not aligned starting from 0 and negative coordinates | 1 1
Testing BigArrays tests passed