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1.5.0-DEV-e0740fe5a6.log
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Julia Version 1.5.0-DEV.147
Commit e0740fe5a6 (2020-01-24 14:13 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed Requires ──────────────────── v1.0.0
Installed Missings ──────────────────── v0.4.3
Installed TableTraits ───────────────── v1.0.0
Installed ShiftedArrays ─────────────── v1.0.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed StatsBase ─────────────────── v0.32.0
Installed Surrogates ────────────────── v1.0.1
Installed OrderedCollections ────────── v1.1.0
Installed Arpack ────────────────────── v0.4.0
Installed OpenSpecFun_jll ───────────── v0.5.3+1
Installed Tables ────────────────────── v0.2.11
Installed Reexport ──────────────────── v0.2.0
Installed FillArrays ────────────────── v0.8.4
Installed PDMats ────────────────────── v0.9.11
Installed DataAPI ───────────────────── v1.1.0
Installed LatinHypercubeSampling ────── v1.4.0
Installed StatsFuns ─────────────────── v0.9.3
Installed DataStructures ────────────── v0.17.9
Installed Distributions ─────────────── v0.21.12
Installed DataValueInterfaces ───────── v1.0.0
Installed QuadGK ────────────────────── v2.3.1
Installed BinaryProvider ────────────── v0.5.8
Installed Arpack_jll ────────────────── v3.5.0+2
Installed SpecialFunctions ──────────── v0.9.0
Installed Rmath ─────────────────────── v0.6.0
Installed StatsModels ───────────────── v0.6.7
Installed OpenBLAS_jll ──────────────── v0.3.7+4
Installed SortingAlgorithms ─────────── v0.3.1
Installed GLM ───────────────────────── v1.3.6
Installed Sobol ─────────────────────── v1.3.0
Updating `~/.julia/environments/v1.5/Project.toml`
[6fc51010] + Surrogates v1.0.1
Updating `~/.julia/environments/v1.5/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[b99e7846] + BinaryProvider v0.5.8
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.9
[e2d170a0] + DataValueInterfaces v1.0.0
[31c24e10] + Distributions v0.21.12
[1a297f60] + FillArrays v0.8.4
[38e38edf] + GLM v1.3.6
[82899510] + IteratorInterfaceExtensions v1.0.0
[a5e1c1ea] + LatinHypercubeSampling v1.4.0
[e1d29d7a] + Missings v0.4.3
[4536629a] + OpenBLAS_jll v0.3.7+4
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.11
[1fd47b50] + QuadGK v2.3.1
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.0
[79098fc4] + Rmath v0.6.0
[1277b4bf] + ShiftedArrays v1.0.0
[ed01d8cd] + Sobol v1.3.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.3
[3eaba693] + StatsModels v0.6.7
[6fc51010] + Surrogates v1.0.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath → `~/.julia/packages/Rmath/BoBag/deps/build.log`
Updating `/tmp/jl_Kmq7sj/Project.toml`
[no changes]
Updating `/tmp/jl_Kmq7sj/Manifest.toml`
[no changes]
Testing Surrogates
Installed Tracker ────────────── v0.2.6
Installed ForwardDiff ────────── v0.10.9
Installed Cubature ───────────── v1.4.1
Installed XGBoost ────────────── v0.4.2
Installed Zygote ─────────────── v0.4.6
Installed Flux ───────────────── v0.10.1
Installed Stheno ─────────────── v0.5.0
Installed FFTW_jll ───────────── v3.3.9+3
Installed Colors ─────────────── v0.9.6
Installed FixedPointNumbers ──── v0.6.1
Installed CodecZlib ──────────── v0.6.0
Installed RecipesBase ────────── v0.7.0
Installed AbstractFFTs ───────── v0.5.0
Installed NNlib ──────────────── v0.6.4
Installed CUDAdrv ────────────── v5.0.1
Installed CUDAapi ────────────── v2.1.0
Installed ZipFile ────────────── v0.9.1
Installed IntelOpenMP_jll ────── v2018.0.3+0
Installed CommonSubexpressions ─ v0.2.0
Installed CEnum ──────────────── v0.2.0
Installed FFTW ───────────────── v1.2.0
Installed AbstractTrees ──────── v0.3.1
Installed LLVM ───────────────── v1.3.3
Installed CuArrays ───────────── v1.7.0
Installed NaNMath ────────────── v0.3.3
Installed DiffRules ──────────── v1.0.0
Installed Zlib_jll ───────────── v1.2.11+7
Installed Distances ──────────── v0.8.2
Installed Media ──────────────── v0.5.0
Installed Adapt ──────────────── v1.0.0
Installed MacroTools ─────────── v0.5.3
Installed StaticArrays ───────── v0.12.1
Installed IRTools ────────────── v0.3.0
Installed DiffResults ────────── v1.0.2
Installed TranscodingStreams ─── v0.9.5
Installed ZygoteRules ────────── v0.2.0
Installed TimerOutputs ───────── v0.5.3
Installed GPUArrays ──────────── v2.0.1
Installed ColorTypes ─────────── v0.8.1
Installed CUDAnative ─────────── v2.8.1
Installed Juno ───────────────── v0.7.2
Installed MKL_jll ────────────── v2019.0.117+2
Installed BlockArrays ────────── v0.10.2
Updating `/tmp/jl_fdO7ra/Project.toml`
[667455a9] + Cubature v1.4.1
[587475ba] + Flux v0.10.1
[f6369f11] + ForwardDiff v0.10.9
[8188c328] + Stheno v0.5.0
[9f7883ad] + Tracker v0.2.6
[009559a3] + XGBoost v0.4.2
[e88e6eb3] + Zygote v0.4.6
Updating `/tmp/jl_fdO7ra/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[1520ce14] + AbstractTrees v0.3.1
[79e6a3ab] + Adapt v1.0.0
[8e7c35d0] + BlockArrays v0.10.2
[fa961155] + CEnum v0.2.0
[3895d2a7] + CUDAapi v2.1.0
[c5f51814] + CUDAdrv v5.0.1
[be33ccc6] + CUDAnative v2.8.1
[944b1d66] + CodecZlib v0.6.0
[3da002f7] + ColorTypes v0.8.1
[5ae59095] + Colors v0.9.6
[bbf7d656] + CommonSubexpressions v0.2.0
[3a865a2d] + CuArrays v1.7.0
[667455a9] + Cubature v1.4.1
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.0
[b4f34e82] + Distances v0.8.2
[7a1cc6ca] + FFTW v1.2.0
[f5851436] + FFTW_jll v3.3.9+3
[53c48c17] + FixedPointNumbers v0.6.1
[587475ba] + Flux v0.10.1
[f6369f11] + ForwardDiff v0.10.9
[0c68f7d7] + GPUArrays v2.0.1
[7869d1d1] + IRTools v0.3.0
[1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
[e5e0dc1b] + Juno v0.7.2
[929cbde3] + LLVM v1.3.3
[856f044c] + MKL_jll v2019.0.117+2
[1914dd2f] + MacroTools v0.5.3
[e89f7d12] + Media v0.5.0
[872c559c] + NNlib v0.6.4
[77ba4419] + NaNMath v0.3.3
[3cdcf5f2] + RecipesBase v0.7.0
[90137ffa] + StaticArrays v0.12.1
[8188c328] + Stheno v0.5.0
[a759f4b9] + TimerOutputs v0.5.3
[9f7883ad] + Tracker v0.2.6
[3bb67fe8] + TranscodingStreams v0.9.5
[009559a3] + XGBoost v0.4.2
[a5390f91] + ZipFile v0.9.1
[83775a58] + Zlib_jll v1.2.11+7
[e88e6eb3] + Zygote v0.4.6
[700de1a5] + ZygoteRules v0.2.0
[8bb1440f] + DelimitedFiles
[a63ad114] + Mmap
[9abbd945] + Profile
Building Cubature ─→ `~/.julia/packages/Cubature/GQTey/deps/build.log`
Updating `/tmp/jl_nTOBNL/Project.toml`
[no changes]
Updating `/tmp/jl_nTOBNL/Manifest.toml`
[no changes]
Building XGBoost ──→ `~/.julia/packages/XGBoost/LXjD0/deps/build.log`
Updating `/tmp/jl_41FYS7/Project.toml`
[no changes]
Updating `/tmp/jl_41FYS7/Manifest.toml`
[no changes]
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Updating `/tmp/jl_5KxZkJ/Project.toml`
[no changes]
Updating `/tmp/jl_5KxZkJ/Manifest.toml`
[no changes]
Building NNlib ────→ `~/.julia/packages/NNlib/3krvM/deps/build.log`
Updating `/tmp/jl_0IwKPC/Project.toml`
[no changes]
Updating `/tmp/jl_0IwKPC/Manifest.toml`
[no changes]
Building FFTW ─────→ `~/.julia/packages/FFTW/qqcBj/deps/build.log`
Updating `/tmp/jl_z5IxqH/Project.toml`
[no changes]
Updating `/tmp/jl_z5IxqH/Manifest.toml`
[no changes]
Running sandbox
Status `/tmp/jl_fdO7ra/Project.toml`
[667455a9] Cubature v1.4.1
[31c24e10] Distributions v0.21.12
[587475ba] Flux v0.10.1
[f6369f11] ForwardDiff v0.10.9
[38e38edf] GLM v1.3.6
[a5e1c1ea] LatinHypercubeSampling v1.4.0
[1fd47b50] QuadGK v2.3.1
[ae029012] Requires v1.0.0
[ed01d8cd] Sobol v1.3.0
[8188c328] Stheno v0.5.0
[6fc51010] Surrogates v1.0.1
[9f7883ad] Tracker v0.2.6
[009559a3] XGBoost v0.4.2
[e88e6eb3] Zygote v0.4.6
[37e2e46d] LinearAlgebra
[8dfed614] Test
Test Summary: | Pass Total
Radials.jl | 12 12
Test Summary: | Pass Total
Kriging.jl | 5 5
Test Summary: | Pass Total
Sampling | 7 7
WARNING: could not import Compiler.just_construct_ssa into Wrap
┌ Warning: Deprecated syntax `(;)` at /home/pkgeval/.julia/packages/IRTools/Fl3dY/src/passes/relooper.jl:148.
│ Use `begin end` instead.
└ @ ~/.julia/packages/IRTools/Fl3dY/src/passes/relooper.jl:148
┌ Warning: Deprecated syntax `(;)` at /home/pkgeval/.julia/packages/IRTools/Fl3dY/src/passes/relooper.jl:157.
│ Use `begin end` instead.
└ @ ~/.julia/packages/IRTools/Fl3dY/src/passes/relooper.jl:157
┌ Warning: Deprecated syntax `(;)` at /home/pkgeval/.julia/packages/IRTools/Fl3dY/src/passes/relooper.jl:167.
│ Use `begin end` instead.
└ @ ~/.julia/packages/IRTools/Fl3dY/src/passes/relooper.jl:167
[ Info: CUDAdrv.jl failed to initialize, GPU functionality unavailable (set JULIA_CUDA_SILENT or JULIA_CUDA_VERBOSE to silence or expand this message)
┌ Warning: Package Surrogates does not have Flux in its dependencies:
│ - If you have Surrogates checked out for development and have
│ added Flux as a dependency but haven't updated your primary
│ environment's manifest file, try `Pkg.resolve()`.
│ - Otherwise you may need to report an issue with Surrogates
└ Loading Flux into Surrogates from project dependency, future warnings for Surrogates are suppressed.
Out of sampling points
Out of sampling points
Exiting, too narrow
Exiting, too narrow
Exiting, too narrow
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
[ Info: Epoch 1
Exiting, too narrow
[1] train-rmse:13.194593
[2] train-rmse:10.408095
[1] train-rmse:13.289189
[2] train-rmse:10.334058
[1] train-rmse:13.341261
[2] train-rmse:10.258700
[1] train-rmse:13.371498
[2] train-rmse:10.145645
[1] train-rmse:13.286990
[2] train-rmse:10.000513
[1] train-rmse:13.436023
[2] train-rmse:10.041398
[1] train-rmse:13.357861
[2] train-rmse:9.994922
[1] train-rmse:13.446671
[2] train-rmse:10.019703
[1] train-rmse:13.518690
[2] train-rmse:10.036297
[1] train-rmse:13.578146
[2] train-rmse:10.047316
[1] train-rmse:13.627979
[2] train-rmse:10.054465
[1] train-rmse:13.670295
[2] train-rmse:10.058885
[1] train-rmse:13.706634
[2] train-rmse:10.061354
[1] train-rmse:13.738150
[2] train-rmse:10.042356
[1] train-rmse:13.447995
[2] train-rmse:9.825844
[1] train-rmse:13.225159
[2] train-rmse:9.660718
Exiting, scale too big
Exiting, scale too big
Completed maximum number of iterations
┌ Warning: `TruncatedNormal(mu::Real, sigma::Real, a::Real, b::Real)` is deprecated, use `truncated(Normal(mu, sigma), a, b)` instead.
│ caller = surrogate_optimize(::Function, ::SOP{Int64}, ::Float64, ::Float64, ::Kriging{Array{Float64,1},Array{Float64,1},Float64,Float64,Float64,Array{Float64,2},Float64,Array{Float64,2}}, ::SobolSample; maxiters::Int64, num_new_samples::Int64) at Optimization.jl:1088
└ @ Surrogates ~/.julia/packages/Surrogates/dfpEW/src/Optimization.jl:1088
Test Summary: |
Optimization | No tests
Test Summary: |
LinearSurrogate | No tests
Test Summary: | Pass Total
Lobachesky | 2 2
[1] train-rmse:8.165893
[2] train-rmse:6.457843
[1] train-rmse:9.436969
[2] train-rmse:7.421811
[1] train-rmse:11.972403
[2] train-rmse:9.287623
[1] train-rmse:806.458191
[2] train-rmse:680.993652
[1] train-rmse:736.192261
[2] train-rmse:621.659302
[1] train-rmse:637.561890
signal (15): Terminated
in expression starting at none:13
pthread_cond_wait at /lib/x86_64-linux-gnu/libpthread.so.0 (unknown line)