-
Notifications
You must be signed in to change notification settings - Fork 5
/
1.5.0-DEV-e0740fe5a6.log
253 lines (252 loc) · 14.2 KB
/
1.5.0-DEV-e0740fe5a6.log
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
Julia Version 1.5.0-DEV.147
Commit e0740fe5a6 (2020-01-24 14:13 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed GenomicMaps ───────────────── v0.1.2
Installed PooledArrays ──────────────── v0.5.3
Installed PaddedViews ───────────────── v0.5.1
Installed Expat_jll ─────────────────── v2.2.7+0
Installed Xorg_libxcb_jll ───────────── v1.13.0+0
Installed Codecs ────────────────────── v0.5.0
Installed FixedPointNumbers ─────────── v0.7.1
Installed Colors ────────────────────── v0.11.2
Installed Requires ──────────────────── v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed ImageMagick_jll ───────────── v6.9.10-12+0
Installed JpegTurbo_jll ─────────────── v2.0.1+0
Installed Combinatorics ─────────────── v0.7.0
Installed Compat ────────────────────── v2.2.0
Installed StatsBase ─────────────────── v0.32.0
Installed Xorg_libXext_jll ──────────── v1.3.4+0
Installed Missings ──────────────────── v0.4.3
Installed Xorg_xproto_jll ───────────── v7.0.31+0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed Pixman_jll ────────────────── v0.38.4+1
Installed Xorg_xextproto_jll ────────── v7.3.0+0
Installed Xorg_libX11_jll ───────────── v1.6.8+0
Installed OpenSpecFun_jll ───────────── v0.5.3+1
Installed RecipesBase ───────────────── v0.7.0
Installed OrderedCollections ────────── v1.1.0
Installed BioCore ───────────────────── v2.0.5
Installed Tables ────────────────────── v0.2.11
Installed Xorg_libXdmcp_jll ─────────── v1.1.3+0
Installed Cairo_jll ─────────────────── v1.16.0+2
Installed Glib_jll ──────────────────── v2.59.0+1
Installed Bzip2_jll ─────────────────── v1.0.6+1
Installed Libuuid_jll ───────────────── v2.34.0+3
Installed Gettext_jll ───────────────── v0.20.1+1
Installed Xorg_xcb_proto_jll ────────── v1.13.0+0
Installed JSON ──────────────────────── v0.21.0
Installed InvertedIndices ───────────── v1.0.0
Installed IndexableBitVectors ───────── v1.0.0
Installed PCRE_jll ──────────────────── v8.42.0+1
Installed ImageMagick ───────────────── v1.1.2
Installed Reexport ──────────────────── v0.2.0
Installed Fontconfig_jll ────────────── v2.13.1+9
Installed Graphics ──────────────────── v1.0.1
Installed QuartzImageIO ─────────────── v0.6.0
Installed FriBidi_jll ───────────────── v1.0.5+2
Installed Graphite2_jll ─────────────── v1.3.13+1
Installed LZO_jll ───────────────────── v2.10.0+0
Installed Libtiff_jll ───────────────── v4.0.10+0
Installed BioSequences ──────────────── v1.1.0
Installed OffsetArrays ──────────────── v1.0.2
Installed NaNMath ───────────────────── v0.3.3
Installed IntervalTrees ─────────────── v1.0.0
Installed DataStructures ────────────── v0.17.9
Installed MacroTools ────────────────── v0.5.3
Installed Libffi_jll ────────────────── v3.2.1+0
Installed Libiconv_jll ──────────────── v1.16.0+0
Installed Libgpg_error_jll ──────────── v1.36.0+0
Installed Zlib_jll ──────────────────── v1.2.11+7
Installed Automa ────────────────────── v0.8.0
Installed DataAPI ───────────────────── v1.1.0
Installed Xorg_inputproto_jll ───────── v2.3.2+0
Installed ColorVectorSpace ──────────── v0.8.2
Installed Xorg_libpthread_stubs_jll ─── v0.1.0+0
Installed Xorg_kbproto_jll ──────────── v1.0.7+0
Installed X11_jll ───────────────────── v1.6.8+4
Installed DataValueInterfaces ───────── v1.0.0
Installed MappedArrays ──────────────── v0.2.2
Installed Xorg_renderproto_jll ──────── v0.11.1+0
Installed Media ─────────────────────── v0.5.0
Installed SpecialFunctions ──────────── v0.9.0
Installed XSLT_jll ──────────────────── v1.1.33+0
Installed YAML ──────────────────────── v0.3.2
Installed Parsers ───────────────────── v0.3.10
Installed CategoricalArrays ─────────── v0.7.7
Installed Xorg_xtrans_jll ───────────── v1.4.0+0
Installed GZip ──────────────────────── v0.5.1
Installed FreeType2_jll ─────────────── v2.10.1+1
Installed ColorTypes ────────────────── v0.9.1
Installed FileIO ────────────────────── v1.2.1
Installed GenomicAnnotations ────────── v0.1.1
Installed Zstd_jll ──────────────────── v1.4.4+0
Installed Polynomials ───────────────── v0.6.0
Installed TranscodingStreams ────────── v0.9.5
Installed Twiddle ───────────────────── v1.1.1
Installed BioSymbols ────────────────── v3.1.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed Xorg_util_macros_jll ──────── v1.19.2+0
Installed ImageCore ─────────────────── v0.8.11
Installed Xorg_libXau_jll ───────────── v1.0.9+0
Installed Juno ──────────────────────── v0.7.2
Installed libpng_jll ────────────────── v1.6.37+2
Installed Cairo ─────────────────────── v1.0.2
Installed BufferedStreams ───────────── v1.0.0
Installed HarfBuzz_jll ──────────────── v2.6.1+4
Installed Pango_jll ─────────────────── v1.42.4+7
Installed XML2_jll ──────────────────── v2.9.9+1
Installed Libgcrypt_jll ─────────────── v1.8.5+0
Installed Xorg_libXrender_jll ───────── v0.9.10+0
Installed DataFrames ────────────────── v0.20.0
Installed Luxor ─────────────────────── v1.7.0
Updating `~/.julia/environments/v1.5/Project.toml`
[db448a0f] + GenomicMaps v0.1.2
Updating `~/.julia/environments/v1.5/Manifest.toml`
[67c07d97] + Automa v0.8.0
[37cfa864] + BioCore v2.0.5
[7e6ae17a] + BioSequences v1.1.0
[3c28c6f8] + BioSymbols v3.1.0
[e1450e63] + BufferedStreams v1.0.0
[6e34b625] + Bzip2_jll v1.0.6+1
[159f3aea] + Cairo v1.0.2
[83423d85] + Cairo_jll v1.16.0+2
[324d7699] + CategoricalArrays v0.7.7
[19ecbf4d] + Codecs v0.5.0
[3da002f7] + ColorTypes v0.9.1
[c3611d14] + ColorVectorSpace v0.8.2
[5ae59095] + Colors v0.11.2
[861a8166] + Combinatorics v0.7.0
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.20.0
[864edb3b] + DataStructures v0.17.9
[e2d170a0] + DataValueInterfaces v1.0.0
[2e619515] + Expat_jll v2.2.7+0
[5789e2e9] + FileIO v1.2.1
[53c48c17] + FixedPointNumbers v0.7.1
[a3f928ae] + Fontconfig_jll v2.13.1+9
[d7e528f0] + FreeType2_jll v2.10.1+1
[559328eb] + FriBidi_jll v1.0.5+2
[92fee26a] + GZip v0.5.1
[4f8a0a0a] + GenomicAnnotations v0.1.1
[db448a0f] + GenomicMaps v0.1.2
[78b55507] + Gettext_jll v0.20.1+1
[7746bdde] + Glib_jll v2.59.0+1
[a2bd30eb] + Graphics v1.0.1
[3b182d85] + Graphite2_jll v1.3.13+1
[2e76f6c2] + HarfBuzz_jll v2.6.1+4
[a09fc81d] + ImageCore v0.8.11
[6218d12a] + ImageMagick v1.1.2
[c73af94c] + ImageMagick_jll v6.9.10-12+0
[1cb3b9ac] + IndexableBitVectors v1.0.0
[524e6230] + IntervalTrees v1.0.0
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[aacddb02] + JpegTurbo_jll v2.0.1+0
[e5e0dc1b] + Juno v0.7.2
[dd4b983a] + LZO_jll v2.10.0+0
[e9f186c6] + Libffi_jll v3.2.1+0
[d4300ac3] + Libgcrypt_jll v1.8.5+0
[7add5ba3] + Libgpg_error_jll v1.36.0+0
[94ce4f54] + Libiconv_jll v1.16.0+0
[89763e89] + Libtiff_jll v4.0.10+0
[38a345b3] + Libuuid_jll v2.34.0+3
[ae8d54c2] + Luxor v1.7.0
[1914dd2f] + MacroTools v0.5.3
[dbb5928d] + MappedArrays v0.2.2
[e89f7d12] + Media v0.5.0
[e1d29d7a] + Missings v0.4.3
[77ba4419] + NaNMath v0.3.3
[6fe1bfb0] + OffsetArrays v1.0.2
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[2f80f16e] + PCRE_jll v8.42.0+1
[5432bcbf] + PaddedViews v0.5.1
[36c8627f] + Pango_jll v1.42.4+7
[69de0a69] + Parsers v0.3.10
[30392449] + Pixman_jll v0.38.4+1
[f27b6e38] + Polynomials v0.6.0
[2dfb63ee] + PooledArrays v0.5.3
[dca85d43] + QuartzImageIO v0.6.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[3bb67fe8] + TranscodingStreams v0.9.5
[7200193e] + Twiddle v1.1.1
[546b0b6d] + X11_jll v1.6.8+4
[02c8fc9c] + XML2_jll v2.9.9+1
[aed1982a] + XSLT_jll v1.1.33+0
[84d6cd60] + Xorg_inputproto_jll v2.3.2+0
[060dd47b] + Xorg_kbproto_jll v1.0.7+0
[4f6342f7] + Xorg_libX11_jll v1.6.8+0
[0c0b7dd1] + Xorg_libXau_jll v1.0.9+0
[a3789734] + Xorg_libXdmcp_jll v1.1.3+0
[1082639a] + Xorg_libXext_jll v1.3.4+0
[ea2f1a96] + Xorg_libXrender_jll v0.9.10+0
[14d82f49] + Xorg_libpthread_stubs_jll v0.1.0+0
[c7cfdc94] + Xorg_libxcb_jll v1.13.0+0
[21e99dc2] + Xorg_renderproto_jll v0.11.1+0
[7c09cfe3] + Xorg_util_macros_jll v1.19.2+0
[c2e9c405] + Xorg_xcb_proto_jll v1.13.0+0
[d13bc2ba] + Xorg_xextproto_jll v7.3.0+0
[46797783] + Xorg_xproto_jll v7.0.31+0
[c5fb5394] + Xorg_xtrans_jll v1.4.0+0
[ddb6d928] + YAML v0.3.2
[83775a58] + Zlib_jll v1.2.11+7
[3161d3a3] + Zstd_jll v1.4.4+0
[b53b4c65] + libpng_jll v1.6.37+2
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
ERROR: Package GenomicMaps did not provide a `test/runtests.jl` file
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1440
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:300
[5] #test#66 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[11] top-level scope at none:13