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1.5.0-DEV-e0740fe5a6.log
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Julia Version 1.5.0-DEV.147
Commit e0740fe5a6 (2020-01-24 14:13 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed PositiveFactorizations ─ v0.2.3
Installed Requires ─────────────── v1.0.0
Installed Missings ─────────────── v0.4.3
Installed ArrayInterface ───────── v2.3.1
Installed OrderedCollections ───── v1.1.0
Installed StatsBase ────────────── v0.32.0
Installed DynamicHMC ───────────── v2.1.4
Installed Optim ────────────────── v0.20.0
Installed NLSolversBase ────────── v7.6.0
Installed FiniteDiff ───────────── v2.0.0
Installed OpenSpecFun_jll ──────── v0.5.3+1
Installed NaNMath ──────────────── v0.3.3
Installed FillArrays ───────────── v0.8.4
Installed CommonSubexpressions ─── v0.2.0
Installed JSON ─────────────────── v0.21.0
Installed TransformVariables ───── v0.3.9
Installed MacroTools ───────────── v0.5.3
Installed DocStringExtensions ──── v0.8.1
Installed DataStructures ───────── v0.17.9
Installed DataAPI ──────────────── v1.1.0
Installed StaticArrays ─────────── v0.12.1
Installed ForwardDiff ──────────── v0.10.9
Installed DiffRules ────────────── v1.0.0
Installed DiffResults ──────────── v1.0.2
Installed SpecialFunctions ─────── v0.9.0
Installed Parsers ──────────────── v0.3.10
Installed BenchmarkTools ───────── v0.4.3
Installed ArgCheck ─────────────── v1.0.1
Installed Parameters ───────────── v0.12.0
Installed SortingAlgorithms ────── v0.3.1
Installed LineSearches ─────────── v7.0.1
Installed LogDensityProblems ───── v0.10.1
Updating `~/.julia/environments/v1.5/Project.toml`
[bbc10e6e] + DynamicHMC v2.1.4
Updating `~/.julia/environments/v1.5/Manifest.toml`
[dce04be8] + ArgCheck v1.0.1
[4fba245c] + ArrayInterface v2.3.1
[6e4b80f9] + BenchmarkTools v0.4.3
[bbf7d656] + CommonSubexpressions v0.2.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.9
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.0
[ffbed154] + DocStringExtensions v0.8.1
[bbc10e6e] + DynamicHMC v2.1.4
[1a297f60] + FillArrays v0.8.4
[6a86dc24] + FiniteDiff v2.0.0
[f6369f11] + ForwardDiff v0.10.9
[682c06a0] + JSON v0.21.0
[d3d80556] + LineSearches v7.0.1
[6fdf6af0] + LogDensityProblems v0.10.1
[1914dd2f] + MacroTools v0.5.3
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.6.0
[77ba4419] + NaNMath v0.3.3
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[429524aa] + Optim v0.20.0
[bac558e1] + OrderedCollections v1.1.0
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[ae029012] + Requires v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[84d833dd] + TransformVariables v0.3.9
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing DynamicHMC
Installed Combinatorics ─────── v1.0.0
Installed RecipesBase ───────── v0.7.0
Installed MCMCDiagnostics ───── v0.3.0
Installed Arpack ────────────── v0.4.0
Installed HypothesisTests ───── v0.9.0
Installed LogDensityTestSuite ─ v0.5.1
Installed Distributions ─────── v0.21.12
Installed PDMats ────────────── v0.9.11
Installed Documenter ────────── v0.24.4
Installed QuadGK ────────────── v2.3.1
Installed Arpack_jll ────────── v3.5.0+2
Installed Roots ─────────────── v0.8.4
Installed StatsFuns ─────────── v0.9.3
Installed BinaryProvider ────── v0.5.8
Installed OpenBLAS_jll ──────── v0.3.7+4
Installed Rmath ─────────────── v0.6.0
Installed Polynomials ───────── v0.6.0
Installed Sobol ─────────────── v1.3.0
Updating `/tmp/jl_rlPI10/Project.toml`
[e30172f5] + Documenter v0.24.4
[09f84164] + HypothesisTests v0.9.0
[feb245ec] + LogDensityTestSuite v0.5.1
[6e857e4b] + MCMCDiagnostics v0.3.0
Updating `/tmp/jl_rlPI10/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[b99e7846] + BinaryProvider v0.5.8
[861a8166] + Combinatorics v1.0.0
[31c24e10] + Distributions v0.21.12
[e30172f5] + Documenter v0.24.4
[09f84164] + HypothesisTests v0.9.0
[feb245ec] + LogDensityTestSuite v0.5.1
[6e857e4b] + MCMCDiagnostics v0.3.0
[4536629a] + OpenBLAS_jll v0.3.7+4
[90014a1f] + PDMats v0.9.11
[f27b6e38] + Polynomials v0.6.0
[1fd47b50] + QuadGK v2.3.1
[3cdcf5f2] + RecipesBase v0.7.0
[79098fc4] + Rmath v0.6.0
[f2b01f46] + Roots v0.8.4
[ed01d8cd] + Sobol v1.3.0
[4c63d2b9] + StatsFuns v0.9.3
[4607b0f0] + SuiteSparse
Building Rmath → `~/.julia/packages/Rmath/BoBag/deps/build.log`
Updating `/tmp/jl_GHHIB6/Project.toml`
[no changes]
Updating `/tmp/jl_GHHIB6/Manifest.toml`
[no changes]
Running sandbox
Status `/tmp/jl_rlPI10/Project.toml`
[dce04be8] ArgCheck v1.0.1
[ffbed154] DocStringExtensions v0.8.1
[e30172f5] Documenter v0.24.4
[bbc10e6e] DynamicHMC v2.1.4
[f6369f11] ForwardDiff v0.10.9
[09f84164] HypothesisTests v0.9.0
[6fdf6af0] LogDensityProblems v0.10.1
[feb245ec] LogDensityTestSuite v0.5.1
[6e857e4b] MCMCDiagnostics v0.3.0
[d41bc354] NLSolversBase v7.6.0
[429524aa] Optim v0.20.0
[d96e819e] Parameters v0.12.0
[2913bbd2] StatsBase v0.32.0
[84d833dd] TransformVariables v0.3.9
[37e2e46d] LinearAlgebra
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Test Summary: | Pass Total
simulated meancov | 2 2
Test Summary: | Pass Total
test-trees.jl | 2003798 2003798
Test Summary: | Pass Total
test-hamiltonian.jl | 13262 13262
Test Summary: | Pass Total
test-NUTS.jl | 32 32
Test Summary: | Pass Total
test-stepsize.jl | 1132 1132
Test Summary: | Pass Total
test-mcmc.jl | 13 13
Test Summary: | Pass Total
test-diagnostics.jl | 20 20
INFO while testing: elongate(1.2, 𝑁), dimension 5
ALERT some EBFMI = [0.196, 0.296, 0.353] > 0.2
Test Summary: | Pass Total
sample-correctness-tests.jl | 154 154
Testing DynamicHMC tests passed