From df66d624c8c22bf36a37f4b2451deac9985d435b Mon Sep 17 00:00:00 2001 From: James Santangelo Date: Wed, 4 Dec 2024 16:57:47 -0500 Subject: [PATCH] Fixing samtools install --- ngsParalog/Singularity.ngsParalog_v1.3.3 | 8 +++++--- 1 file changed, 5 insertions(+), 3 deletions(-) diff --git a/ngsParalog/Singularity.ngsParalog_v1.3.3 b/ngsParalog/Singularity.ngsParalog_v1.3.3 index 9d1f9a5..fcc3c2b 100644 --- a/ngsParalog/Singularity.ngsParalog_v1.3.3 +++ b/ngsParalog/Singularity.ngsParalog_v1.3.3 @@ -45,11 +45,13 @@ From: ubuntu:bionic liblzma-dev \ libcurl4-gnutls-dev \ libcrypto++-dev \ + libncurses5-dev \ + libncursesw5-dev cd /opt && mkdir bin - wget https://github.com/samtools/samtools/archive/1.21.0.tar.bz2 && - tar -xvjf 1.21.0.tar.gz && \ - cd samtools-1.21.0 && \ + wget https://github.com/samtools/samtools/releases/download/1.21/samtools-1.21.tar.bz2 && + tar -xvjf samtools-1.21.tar.bz2 && \ + cd samtools-1.21 && \ autoheader && \ autoconf -Who-syntax && \ ./configure && \