From b150e9ccf13205212bf719a45ce5b8841ac059ad Mon Sep 17 00:00:00 2001 From: Christoph Date: Sat, 27 Mar 2021 22:43:55 +0100 Subject: [PATCH 1/8] Fix school/instituation is printed twice (#7574) * Fix school/instituation is printed twice Report from forum https://discourse.jabref.org/t/problem-with-exporting-techreport-phdthesis-mastersthesis-to-html/2634 * Update simplehtml.layout Remove whitespace --- CHANGELOG.md | 1 + src/main/resources/resource/layout/simplehtml.layout | 2 +- 2 files changed, 2 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index cd67967d3c1..191e92b9f3d 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -36,6 +36,7 @@ Note that this project **does not** adhere to [Semantic Versioning](http://semve ### Fixed +- We fixed an issue where the value of the field `school` or `institution` would be printed twice in the HTML Export [forum#2634](https://discourse.jabref.org/t/problem-with-exporting-techreport-phdthesis-mastersthesis-to-html/2634) - We fixed an issue preventing to connect to a shared database. [#7570](https://github.com/JabRef/jabref/pull/7570) - We fixed an issue preventing files from being dragged & dropped into an empty library. [#6851](https://github.com/JabRef/jabref/issues/6851) - We fixed an issue where double-click onto PDF in file list under the 'General' tab section should just open the file. [#7465](https://github.com/JabRef/jabref/issues/7465) diff --git a/src/main/resources/resource/layout/simplehtml.layout b/src/main/resources/resource/layout/simplehtml.layout index 37c963dc40d..23a2ea0f2f2 100644 --- a/src/main/resources/resource/layout/simplehtml.layout +++ b/src/main/resources/resource/layout/simplehtml.layout @@ -4,5 +4,5 @@
\format[AuthorLastFirst,AuthorLastFirstAbbreviator,AuthorAndsCommaReplacer,HTMLChars]{\editor} (ed.)
\end{editor}\begin{booktitle}
\format[HTMLChars]{\booktitle}
\end{booktitle}\begin{chapter}
Chapter \format[HTMLChars]{\chapter}
\end{chapter} -
\begin{journal}\format[HTMLChars]{\journal}, \end{journal}\begin{school}\format[HTMLChars]{\school}, \end{school}\begin{institution}\format[HTMLChars]{\institution}, \end{institution}\begin{publisher}\format[HTMLChars]{\publisher}, \end{publisher}\begin{howpublished}\format[HTMLChars]{\howpublished}, \end{howpublished}\begin{year}\year\end{year}\begin{volume}, Vol. \volume\end{volume}\begin{number}(\format[FormatPagesForHTML]{\number})\end{number}\begin{pages}, pp. \format[FormatPagesForHTML]{\pages}\end{pages}
+
\begin{journal}\format[HTMLChars]{\journal}, \end{journal}\begin{school}\format[HTMLChars]{\school}, \end{school}\begin{publisher}\format[HTMLChars]{\publisher}, \end{publisher}\begin{howpublished}\format[HTMLChars]{\howpublished}, \end{howpublished}\begin{year}\year\end{year}\begin{volume}, Vol. \volume\end{volume}\begin{number}(\format[FormatPagesForHTML]{\number})\end{number}\begin{pages}, pp. \format[FormatPagesForHTML]{\pages}\end{pages}
From 1d1156f9e9105fa4cdbce996c6c5d987a1bf260b Mon Sep 17 00:00:00 2001 From: Zheng Dong <57553691+XDZhelheim@users.noreply.github.com> Date: Sun, 28 Mar 2021 05:44:56 +0800 Subject: [PATCH 2/8] Fix for issue 7416: font size of the preferences dialog does not update with the rest of the GUI. (#7509) * Fix #7416 * update CHANGELOG.md * update CHANGELOG.md * delete a blank line * delete some whitespace * delete some whitespace Co-authored-by: Carl Christian Snethlage <50491877+calixtus@users.noreply.github.com> --- CHANGELOG.md | 1 + .../java/org/jabref/gui/preferences/PreferencesDialogView.java | 2 ++ 2 files changed, 3 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 191e92b9f3d..fe617739c7c 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -69,6 +69,7 @@ Note that this project **does not** adhere to [Semantic Versioning](http://semve - We fixed an issue where drag and drop of bib files for opening resulted in uncaught exceptions [#7464](https://github.com/JabRef/jabref/issues/7464) - We fixed an issue where columns shrink in width when we try to enlarge JabRef window. [#6818](https://github.com/JabRef/jabref/issues/6818) - We fixed an issue where Content selector does not seem to work for custom fields. [#6819](https://github.com/JabRef/jabref/issues/6819) +- We fixed an issue where font size of the preferences dialog does not update with the rest of the GUI. [#7416](https://github.com/JabRef/jabref/issues/7416) - We fixed an issue in which a linked online file consisting of a web page was saved as an invalid pdf file upon being downloaded. The user is now notified when downloading a linked file results in an HTML file. [#7452](https://github.com/JabRef/jabref/issues/7452) - We fixed an issue where opening BibTex file (doubleclick) from Folder with spaces not working. [#6487](https://github.com/JabRef/jabref/issues/6487) diff --git a/src/main/java/org/jabref/gui/preferences/PreferencesDialogView.java b/src/main/java/org/jabref/gui/preferences/PreferencesDialogView.java index e0aae949844..fc47d7a3613 100644 --- a/src/main/java/org/jabref/gui/preferences/PreferencesDialogView.java +++ b/src/main/java/org/jabref/gui/preferences/PreferencesDialogView.java @@ -52,6 +52,8 @@ public PreferencesDialogView(JabRefFrame frame) { ControlHelper.setAction(saveButton, getDialogPane(), event -> savePreferencesAndCloseDialog()); + this.getDialogPane().setStyle("-fx-font-size: " + preferencesService.getAppearancePreferences().getMainFontSize() + "pt;"); + // ToDo: After conversion of all tabs to mvvm, rework interface and make validSettings bindable // Button btnSave = (Button) this.getDialogPane().lookupButton(saveButton); // btnSave.disableProperty().bind(viewModel.validSettings().validProperty().not()); From ad2c8cdc3fec7ede3d956d49f337596e76f4e59d Mon Sep 17 00:00:00 2001 From: Oliver Kopp Date: Sun, 28 Mar 2021 21:04:04 +0200 Subject: [PATCH 3/8] Update gradle from 6.8 to 6.8.3 (#7583) --- gradle/wrapper/gradle-wrapper.jar | Bin 58910 -> 59203 bytes gradle/wrapper/gradle-wrapper.properties | 2 +- gradlew | 2 +- gradlew.bat | 21 +++------------------ 4 files changed, 5 insertions(+), 20 deletions(-) diff --git a/gradle/wrapper/gradle-wrapper.jar b/gradle/wrapper/gradle-wrapper.jar index 62d4c053550b91381bbd28b1afc82d634bf73a8a..e708b1c023ec8b20f512888fe07c5bd3ff77bb8f 100644 GIT binary patch delta 6656 zcmY+Ibx_pN*Z*PZ4(U#j1qtbvrOTyO8fghZ8kYJfEe%U|$dV!@ASKczEZq$fg48M@ z;LnHO_j#Uq?%bL4dY^md%$$4Y+&@nKC|1uHR&59YNhubGh72|a#ylPdh9V+akp|I; zPk^W-a00GrFMkz_NSADdv2G2-i6rb=cB_@WnG(**4ZO$=96R=t|NZ@|0_z&q3GwO^ ziUFcuj$a9QaZ3j?xt`5#q`sT-ufrtBP0nt3IA&dr*+VCsBzBVW?vZ6eZr0oD%t33z zm~-5IVsjy(F>;S~Pm@bxX85>Z*@(QL6i3JQc?1ryQFcC@X^2^mZWhFv|v? z49>l|nA&XNQ6#OvccUTyBMB*WO#NA;FW5|eE_K6dtVYP2G?uUZ09!`Iq1IF2gA(aS 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z_`thq0Z^sPzjAk48ssDQj}!$N8Q$XC84(bU$t_Bm69Jf+C!h_}ep zwzpQj9sRA94<{x3{~z&ix-DwX;RAzka)4-#6ZHJqKh|SVuO|>Yrv+m30+!|sK<-|E z=)5E->#y<_1V|T1f%Af!ZYqXg}`O zI$qKOWdnclF`%_Z`WGOe{`A`l-#a?s=Q1a#@BOWmExH2;Wl`OB!B-%lq3nO{4=WO& z#k_x|N&(qzm*6S{G*|GCegF2N2ulC+(58z2DG~yUs}i8zvRf&$CJCaexJ6Xu!`qz( z)*v8*kAE#D0KCo*s{8^Rbg=`*E2MzeIt0|x55%n-gO&yX#$l=3W7-_~&(G8j1E(XB hw}tl`5K!1C(72%nnjQrp<7@!WCh47rWB+@R{{wClNUHz< diff --git a/gradle/wrapper/gradle-wrapper.properties b/gradle/wrapper/gradle-wrapper.properties index da9702f9e70..442d9132ea3 100644 --- a/gradle/wrapper/gradle-wrapper.properties +++ b/gradle/wrapper/gradle-wrapper.properties @@ -1,5 +1,5 @@ distributionBase=GRADLE_USER_HOME distributionPath=wrapper/dists -distributionUrl=https\://services.gradle.org/distributions/gradle-6.8-bin.zip +distributionUrl=https\://services.gradle.org/distributions/gradle-6.8.3-bin.zip zipStoreBase=GRADLE_USER_HOME zipStorePath=wrapper/dists diff --git a/gradlew b/gradlew index fbd7c515832..4f906e0c811 100755 --- a/gradlew +++ b/gradlew @@ -130,7 +130,7 @@ fi if [ "$cygwin" = "true" -o "$msys" = "true" ] ; then APP_HOME=`cygpath --path --mixed "$APP_HOME"` CLASSPATH=`cygpath --path --mixed "$CLASSPATH"` - + JAVACMD=`cygpath --unix "$JAVACMD"` # We build the pattern for arguments to be converted via cygpath diff --git a/gradlew.bat b/gradlew.bat index 5093609d512..107acd32c4e 100644 --- a/gradlew.bat +++ b/gradlew.bat @@ -40,7 +40,7 @@ if defined JAVA_HOME goto findJavaFromJavaHome set JAVA_EXE=java.exe %JAVA_EXE% -version >NUL 2>&1 -if "%ERRORLEVEL%" == "0" goto init +if "%ERRORLEVEL%" == "0" goto execute echo. echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH. @@ -54,7 +54,7 @@ goto fail set JAVA_HOME=%JAVA_HOME:"=% set JAVA_EXE=%JAVA_HOME%/bin/java.exe -if exist "%JAVA_EXE%" goto init +if exist "%JAVA_EXE%" goto execute echo. echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME% @@ -64,21 +64,6 @@ echo location of your Java installation. goto fail -:init -@rem Get command-line arguments, handling Windows variants - -if not "%OS%" == "Windows_NT" goto win9xME_args - -:win9xME_args -@rem Slurp the command line arguments. -set CMD_LINE_ARGS= -set _SKIP=2 - -:win9xME_args_slurp -if "x%~1" == "x" goto execute - -set CMD_LINE_ARGS=%* - :execute @rem Setup the command line @@ -86,7 +71,7 @@ set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar @rem Execute Gradle -"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS% +"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %* :end @rem End local scope for the variables with windows NT shell From 7b35a7c8eebbace079998591241ea1f7402ac9be Mon Sep 17 00:00:00 2001 From: Oliver Kopp Date: Sun, 28 Mar 2021 22:47:24 +0200 Subject: [PATCH 4/8] Re-add LibericaJDK --- .../guidelines-for-setting-up-a-local-workspace.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md b/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md index 9599ebfb70e..8412738ad14 100644 --- a/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md +++ b/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md @@ -20,7 +20,7 @@ This section list the prerequisites you need to get started to develop JabRef. A A working Java \(Develoment Kit\) 15 installation with Java FX support is required. In the command line \(terminal in Linux, cmd in Windows\) run `javac -version` and make sure that the reported version is Java 15 \(e.g `javac 15`\). If `javac` is not found or a wrong version is reported, check your `PATH` environment variable, your `JAVA_HOME` environment variable or install the most recent JDK. -[JavaFX is not part of the default JDK any more](https://www.reddit.com/r/java/comments/82qm9x/javafx_will_be_removed_from_the_java_jdk_in_jdk_11/), it needs to be installed separately if not using a special JDK. ~~We recommend to setup the full Liberica JDK including JavaFX. You can get it from~~ [~~https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full~~](https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full)~~. On Windows, you can execute `choco install libericajdkfull` \(requires~~ [~~installation of chocolatey - a package manager for Windows~~](https://chocolatey.org/install)~~\).~~ \(Liberica JDK 15 does not include the Java compiler properly any more\) +[JavaFX is not part of the default JDK any more](https://www.reddit.com/r/java/comments/82qm9x/javafx_will_be_removed_from_the_java_jdk_in_jdk_11/), it needs to be installed separately if not using a special JDK. We recommend to setup the full Liberica JDK including JavaFX. You can get it from [https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full](https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full). On Windows, you can execute `choco install libericajdkfull` \(requires [installation of chocolatey - a package manager for Windows](https://chocolatey.org/install)\). Download and install the JDK from [https://jdk.java.net/](https://jdk.java.net/). Afterwards, download the "jmods" JavaFX 15 zip archive from [https://gluonhq.com/products/javafx/](https://gluonhq.com/products/javafx/) and put the `.jmod` files into `C:\Program Files\OpenJDK\jdk-15\jmods`. From bd63e4cc63d65ffec99b187f44c4e146a5843fa5 Mon Sep 17 00:00:00 2001 From: Oliver Kopp Date: Sun, 28 Mar 2021 23:03:22 +0200 Subject: [PATCH 5/8] Revert "Re-add LibericaJDK" This reverts commit 7b35a7c8eebbace079998591241ea1f7402ac9be. --- .../guidelines-for-setting-up-a-local-workspace.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md b/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md index 8412738ad14..9599ebfb70e 100644 --- a/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md +++ b/docs/getting-into-the-code/guidelines-for-setting-up-a-local-workspace.md @@ -20,7 +20,7 @@ This section list the prerequisites you need to get started to develop JabRef. A A working Java \(Develoment Kit\) 15 installation with Java FX support is required. In the command line \(terminal in Linux, cmd in Windows\) run `javac -version` and make sure that the reported version is Java 15 \(e.g `javac 15`\). If `javac` is not found or a wrong version is reported, check your `PATH` environment variable, your `JAVA_HOME` environment variable or install the most recent JDK. -[JavaFX is not part of the default JDK any more](https://www.reddit.com/r/java/comments/82qm9x/javafx_will_be_removed_from_the_java_jdk_in_jdk_11/), it needs to be installed separately if not using a special JDK. We recommend to setup the full Liberica JDK including JavaFX. You can get it from [https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full](https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full). On Windows, you can execute `choco install libericajdkfull` \(requires [installation of chocolatey - a package manager for Windows](https://chocolatey.org/install)\). +[JavaFX is not part of the default JDK any more](https://www.reddit.com/r/java/comments/82qm9x/javafx_will_be_removed_from_the_java_jdk_in_jdk_11/), it needs to be installed separately if not using a special JDK. ~~We recommend to setup the full Liberica JDK including JavaFX. You can get it from~~ [~~https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full~~](https://bell-sw.com/pages/downloads/?version=java-15&package=jdk-full)~~. On Windows, you can execute `choco install libericajdkfull` \(requires~~ [~~installation of chocolatey - a package manager for Windows~~](https://chocolatey.org/install)~~\).~~ \(Liberica JDK 15 does not include the Java compiler properly any more\) Download and install the JDK from [https://jdk.java.net/](https://jdk.java.net/). Afterwards, download the "jmods" JavaFX 15 zip archive from [https://gluonhq.com/products/javafx/](https://gluonhq.com/products/javafx/) and put the `.jmod` files into `C:\Program Files\OpenJDK\jdk-15\jmods`. From 9dc931a5858052396dd7c7a25aed240d626ece8d Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Mon, 29 Mar 2021 11:30:47 +0200 Subject: [PATCH 6/8] Bump org.beryx.jlink from 2.23.3 to 2.23.5 (#7588) Bumps org.beryx.jlink from 2.23.3 to 2.23.5. Signed-off-by: dependabot[bot] Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> --- build.gradle | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/build.gradle b/build.gradle index 591de88ff1e..cb6386a401d 100644 --- a/build.gradle +++ b/build.gradle @@ -14,7 +14,7 @@ plugins { id 'com.github.ben-manes.versions' version '0.38.0' id 'org.javamodularity.moduleplugin' version '1.7.0' id 'org.openjfx.javafxplugin' version '0.0.9' - id 'org.beryx.jlink' version '2.23.3' + id 'org.beryx.jlink' version '2.23.5' // nicer test outputs during running and completion // Homepage: https://github.com/radarsh/gradle-test-logger-plugin id 'com.adarshr.test-logger' version '2.1.1' From 7c8ea7476c81b9dedfbee067042185f3a565dbe7 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Mon, 29 Mar 2021 11:31:05 +0200 Subject: [PATCH 7/8] Bump checkstyle from 8.41 to 8.41.1 (#7586) Bumps [checkstyle](https://github.com/checkstyle/checkstyle) from 8.41 to 8.41.1. - [Release notes](https://github.com/checkstyle/checkstyle/releases) - [Commits](https://github.com/checkstyle/checkstyle/compare/checkstyle-8.41...checkstyle-8.41.1) Signed-off-by: dependabot[bot] Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> --- build.gradle | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/build.gradle b/build.gradle index cb6386a401d..40cd5ce31e4 100644 --- a/build.gradle +++ b/build.gradle @@ -213,7 +213,7 @@ dependencies { testImplementation "org.testfx:testfx-junit5:4.0.17-alpha-SNAPSHOT" testImplementation "org.hamcrest:hamcrest-library:2.2" - checkstyle 'com.puppycrawl.tools:checkstyle:8.41' + checkstyle 'com.puppycrawl.tools:checkstyle:8.41.1' xjc group: 'org.glassfish.jaxb', name: 'jaxb-xjc', version: '2.3.3' } From e864b13938df11e94d884ac3e1c5b37f63c9145b Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Mon, 29 Mar 2021 11:31:18 +0200 Subject: [PATCH 8/8] Bump classgraph from 4.8.102 to 4.8.104 (#7587) Bumps [classgraph](https://github.com/classgraph/classgraph) from 4.8.102 to 4.8.104. - [Release notes](https://github.com/classgraph/classgraph/releases) - [Commits](https://github.com/classgraph/classgraph/compare/classgraph-4.8.102...classgraph-4.8.104) Signed-off-by: dependabot[bot] Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> --- build.gradle | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/build.gradle b/build.gradle index 40cd5ce31e4..902c4801190 100644 --- a/build.gradle +++ b/build.gradle @@ -196,7 +196,7 @@ dependencies { implementation 'com.vladsch.flexmark:flexmark-ext-gfm-strikethrough:0.62.2' implementation 'com.vladsch.flexmark:flexmark-ext-gfm-tasklist:0.62.2' - testImplementation 'io.github.classgraph:classgraph:4.8.102' + testImplementation 'io.github.classgraph:classgraph:4.8.104' testImplementation 'org.junit.jupiter:junit-jupiter:5.7.1' testRuntimeOnly 'org.junit.vintage:junit-vintage-engine:5.7.1' testImplementation 'org.junit.platform:junit-platform-launcher:1.7.1'