_config.yml

# Site
name: "Genomic Data Visualization"
title: "Genomic Data Visualization"
description: "Welcome to the Course Website for EN.580.428 Genomic Data Visualization!
<p>
As the primary mode through which analysts and audience members alike consume data, data visualization remains an important hypothesis generating and analytical technique in data-driven research to facilitate new discoveries. However, if done poorly, data visualization can also mislead, bias, and slow down progress. This hands-on course will cover the principles of perception and cognition relevant for data visualization and apply these principles to genomic data, including large-scale single-cell and spatially-resolved omics datasets, using the R statistical programming language. Students will be expected to complete class readings, create weekly data visualizations as homework assignments, and make a major class presentation.
</p>"
logo: '/assets/images/logo.png'
favicon: '/assets/images/logo.png'
baseurl: '/genomic-data-visualization-2024'
google_analytics: ''
include: ["_pages"]
permalink: /:title/
github: 'https://github.com/JEFworks-Lab/genomic-data-visualization-2024'

# Plugins
plugins:
  - jekyll-paginate
  - jekyll-sitemap
  - jekyll-feed
  - jekyll-seo-tag
    
# Pagination 
paginate: 12
paginate_path: /page:num/
    
# Other
markdown: kramdown
kramdown:
  input: GFM
  syntax_highlighter: rouge
  syntax_highlighter_opts:
    block:
      line_numbers: true

# Lazy Images ("enabled" or "disabled")
lazyimages: "disabled"

exclude: [changelog.md, LICENSE.txt, README.md, Gemfile, Gemfile.lock]

collections:
  posts:
    permalink: /blog/:year/:month/:day/:title/
    output: true
  authors:
    permalink: /authors/:title/
    output: true
  course:
    permalink: /course/:title/
    output: true