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examples.yaml
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examples.yaml
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Test_0:
id: CHANGE:001
type: NodeRename
old_value: nuclear envelope
new_value: foo bar
about_node: GO:0005635
about_node_representation: curie
command_with_curie: rename GO:0005635 from 'nuclear envelope' to 'foo bar'
command_with_uri: rename http://purl.obolibrary.org/obo/GO_0005635 from 'nuclear
envelope' to 'foo bar'
Test_1:
id: CHANGE:001
type: NodeRename
old_value: nucleus
new_value: bar
about_node: GO:0005634
about_node_representation: curie
command_with_curie: rename GO:0005634 from 'nucleus' to 'bar'
command_with_uri: rename http://purl.obolibrary.org/obo/GO_0005634 from 'nucleus'
to 'bar'
Test_2:
id: CHANGE:001
type: NodeObsoletion
about_node: GO:0005634
about_node_representation: curie
command_with_curie: obsolete GO:0005634
Test_3:
id: CHANGE:001
type: NodeObsoletionWithDirectReplacement
about_node: GO:0005634
about_node_representation: curie
has_direct_replacement: GO:999
command_with_curie: obsolete GO:0005634 with replacement GO:999
Test_4:
id: CHANGE:001
type: NewSynonym
new_value: foo
about_node: GO:0005634
about_node_representation: curie
qualifier: exact
command_with_curie: create exact synonym 'foo' for GO:0005634
command_with_uri: create exact synonym 'foo' for http://purl.obolibrary.org/obo/GO_0005634
Test_5:
id: CHANGE:001
type: NewSynonym
new_value: foo
about_node: GO:0005634
about_node_representation: curie
language: en
qualifier: broad
command_with_curie: create broad synonym 'foo'@en for GO:0005634
command_with_uri: create broad synonym 'foo'@en for http://purl.obolibrary.org/obo/GO_0005634
Test_6:
id: CHANGE:001
type: RemoveSynonym
old_value: foo
about_node: GO:0005634
about_node_representation: curie
command_with_curie: remove synonym 'foo' for GO:0005634
command_with_uri: remove synonym 'foo' for http://purl.obolibrary.org/obo/GO_0005634
Test_7:
id: CHANGE:001
type: SynonymReplacement
old_value: cell nucleus
new_value: cell NUCLEUS
about_node: GO:0005634
about_node_representation: label
command_with_curie: change synonym 'cell nucleus' for GO:0005634 to 'cell NUCLEUS'
command_with_uri: change synonym 'cell nucleus' for http://purl.obolibrary.org/obo/GO_0005634
to 'cell NUCLEUS'
Test_8:
id: CHANGE:001
type: AddNodeToSubset
about_node: GO:0005634
about_node_representation: curie
in_subset: foo
command_with_curie: add GO:0005634 to subset foo
command_with_uri: add http://purl.obolibrary.org/obo/GO_0005634 to subset foo
Test_9:
id: CHANGE:001
type: RemoveNodeFromSubset
about_node: GO:0005634
about_node_representation: curie
in_subset: foo
command_with_curie: remove GO:0005634 from subset foo
command_with_uri: remove http://purl.obolibrary.org/obo/GO_0005634 from subset foo
Test_10:
id: CHANGE:001
type: ClassCreation
about_node: GO:9999999
about_node_representation: curie
command_with_curie: create GO:9999999
command_with_uri: create http://purl.obolibrary.org/obo/GO_9999999
Test_11:
id: CHANGE:001
type: NodeCreation
about_node: GO:9999999
about_node_representation: curie
name: foo
command_with_curie: create node GO:9999999 'foo'
command_with_uri: TODO
Test_12:
id: CHANGE:001
type: EdgeCreation
object_type: curie
subject: GO:0005634
predicate: BFO:0000050
object: GO:0009411
subject_type: curie
predicate_type: curie
command_with_curie: create edge GO:0005634 BFO:0000050 GO:0009411
command_with_uri: create edge http://purl.obolibrary.org/obo/GO_0005634 http://purl.obolibrary.org/obo/BFO_0000050
http://purl.obolibrary.org/obo/GO_0009411
Test_13:
id: CHANGE:001
type: PlaceUnder
object_type: curie
subject: GO:0005634
predicate: rdfs:subClassOf
object: GO:0009411
subject_type: curie
predicate_type: curie
command_with_curie: create edge GO:0005634 rdfs:subClassOf GO:0009411
command_with_uri: create edge http://purl.obolibrary.org/obo/GO_0005634 http://www.w3.org/2000/01/rdf-schema#subClassOf
http://purl.obolibrary.org/obo/GO_0009411
Test_14:
id: CHANGE:001
type: PredicateChange
old_value: BFO:0000050
new_value: rdfs:subClassOf
old_value_type: curie
new_value_type: curie
about_edge:
subject: GO:0005635
predicate: BFO:0000050
object: GO:0005634
subject_representation: curie
predicate_representation: curie
object_representation: curie
command_with_curie: change relationship between GO:0005635 and GO:0005634 from BFO:0000050
to rdfs:subClassOf
Test_15:
id: CHANGE:001
type: PredicateChange
old_value: rdfs:subClassOf
new_value: BFO:0000050
old_value_type: curie
new_value_type: curie
about_edge:
subject: GO:0005634
predicate: rdfs:subClassOf
object: GO:0043231
subject_representation: curie
predicate_representation: curie
object_representation: curie
command_with_curie: change relationship between GO:0005634 and GO:0043231 from rdfs:subClassOf
to BFO:0000050
command_with_uri: change relationship between http://purl.obolibrary.org/obo/GO_0005634
and http://purl.obolibrary.org/obo/GO_0043231 from http://www.w3.org/2000/01/rdf-schema#subClassOf
to http://purl.obolibrary.org/obo/BFO_0000050
Test_16:
id: CHANGE:001
type: RemoveUnder
object_type: curie
subject: GO:0005634
predicate: rdfs:subClassOf
object: GO:0043231
subject_type: curie
predicate_type: curie
command_with_curie: delete edge GO:0005634 rdfs:subClassOf GO:0043231
command_with_uri: delete edge http://purl.obolibrary.org/obo/GO_0005634 http://www.w3.org/2000/01/rdf-schema#subClassOf
http://purl.obolibrary.org/obo/GO_0043231
Test_17:
id: CHANGE:001
type: EdgeDeletion
object_type: curie
subject: GO:0005635
predicate: BFO:0000050
object: GO:0005634
subject_type: curie
predicate_type: curie
command_with_curie: delete edge GO:0005635 BFO:0000050 GO:0005634
command_with_uri: TODO
Test_18:
id: CHANGE:001
type: NodeDeepening
old_value: GO:0043231
new_value: GO:0005634
about_edge:
subject: GO:0005739
object: GO:0043231
subject_representation: curie
object_representation: curie
old_object_type: curie
new_object_type: curie
command_with_curie: deepen GO:0005739 from GO:0043231 to GO:0005634
command_with_uri: TODO
Test_19:
id: CHANGE:001
type: NewTextDefinition
new_value: this is dummy description
about_node: GO:0005635
about_node_representation: curie
command_with_curie: add definition 'this is dummy description' to GO:0005635
command_with_uri: add definition 'this is dummy description' to http://purl.obolibrary.org/obo/GO_0005635
Test_20:
id: CHANGE:001
type: NodeTextDefinitionChange
new_value: this is dummy description
about_node: GO:0005635
about_node_representation: curie
command_with_curie: change definition of GO:0005635 to 'this is dummy description'
command_with_uri: change definition of http://purl.obolibrary.org/obo/GO_0005635
to 'this is dummy description'
Test_21:
id: CHANGE:001
type: RemoveTextDefinition
about_node: GO:0005634
about_node_representation: curie
command_with_curie: remove definition for GO:0005634
command_with_uri: remove definition for http://purl.obolibrary.org/obo/GO_0005634
Test_22:
id: CHANGE:001
type: NodeObsoletion
about_node: GO:0005634
about_node_representation: curie
command_with_curie: obsolete GO:0005634
command_with_uri: obsolete http://purl.obolibrary.org/obo/GO_0005634
Test_23:
id: CHANGE:001
type: NodeObsoletionWithDirectReplacement
about_node: GO:0005634
about_node_representation: curie
has_direct_replacement: GO:9999999
command_with_curie: obsolete GO:0005634 with replacement GO:9999999
command_with_uri: obsolete http://purl.obolibrary.org/obo/GO_0005634 with replacement
http://purl.obolibrary.org/obo/GO_9999999