You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hi,I'm running fusionfusion using tophat2 mapped bam samples, and I get the following problems, I don't understand what's wrong?
fusionfusion --th2 accepted_hits.bam --refe rence_genome ucsc.hg19.fasta --out dir
Traceback (most recent call last):
File "fusionfusion", line 82, in
main(args)
File "/home/.local/lib/python2.7/site-packages/fusionfusion/run.py", line 164, in main
parseJunctionInfo.parseJuncInfo_th2(output_dir + "/th2.chimeric.sam", output_dir + "/th2.chimeric.tmp.txt", args.abnormal_insert_size)
TypeError: parseJuncInfo_th2() takes exactly 2 arguments (3 given)
The text was updated successfully, but these errors were encountered:
Hi,I'm running fusionfusion using tophat2 mapped bam samples, and I get the following problems, I don't understand what's wrong?
fusionfusion --th2 accepted_hits.bam --refe rence_genome ucsc.hg19.fasta --out dir
Traceback (most recent call last):
File "fusionfusion", line 82, in
main(args)
File "/home/.local/lib/python2.7/site-packages/fusionfusion/run.py", line 164, in main
parseJunctionInfo.parseJuncInfo_th2(output_dir + "/th2.chimeric.sam", output_dir + "/th2.chimeric.tmp.txt", args.abnormal_insert_size)
TypeError: parseJuncInfo_th2() takes exactly 2 arguments (3 given)
The text was updated successfully, but these errors were encountered: