From c2bdb3c49c2253af28b649ed5024b45d20ebb871 Mon Sep 17 00:00:00 2001
From: KatharinaHoff <katharina.hoff@gmail.com>
Date: Tue, 7 Nov 2023 15:14:18 +0100
Subject: [PATCH] updating Dockerfile to clone ETP from GitHub

---
 Dockerfile | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index 990530e..49257ff 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -159,9 +159,8 @@ ENV PATH=${PATH}:/opt/BRAKER/scripts
 
 # include ETP
 RUN cd /opt && \
-    wget  http://topaz.gatech.edu/GeneMark/etp.for_braker.tar.gz && \
-    tar -xzf etp.for_braker.tar.gz && \
-    mv etp.for_braker ETP && \
+    git clone https://github.com/gatech-genemark/GeneMark-ETP.git && \
+    mv GeneMark-ETP ETP && \
     chmod a+x /opt/ETP/bin/*py /opt/ETP/bin/*pl /opt/ETP/tools/*
 
 ENV GENEMARK_PATH=/opt/ETP/bin