diff --git a/scripts/braker.pl b/scripts/braker.pl index 975d30d..4738eae 100755 --- a/scripts/braker.pl +++ b/scripts/braker.pl @@ -7031,7 +7031,7 @@ sub fix_ifs_genes{ } $cmdStr .= " > $otherfilesDir/fix_in_frame_stop_codon_genes_".$label.".log " ."2> $errorfilesDir/fix_in_frame_stop_codon_genes_".$label.".err"; - print LOG $cmdStr . "\n" if ($v > 3); + print LOG $cmdStr . "\n" if ($v > 2); system("$cmdStr") == 0 or die("ERROR in file " . __FILE__ ." at line ". __LINE__ . "\nFailed to execute: $cmdStr\n");