-
Notifications
You must be signed in to change notification settings - Fork 4
/
ontologies.ofn
96 lines (66 loc) · 5.53 KB
/
ontologies.ofn
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
Prefix(owl:=<http://www.w3.org/2002/07/owl#>)
Prefix(rdf:=<http://www.w3.org/1999/02/22-rdf-syntax-ns#>)
Prefix(xml:=<http://www.w3.org/XML/1998/namespace>)
Prefix(xsd:=<http://www.w3.org/2001/XMLSchema#>)
Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
Ontology(<http://translator.renci.org/ubergraph.ofn>
Import(<http://purl.obolibrary.org/obo/uberon/uberon-base.owl>)
Import(<http://purl.obolibrary.org/obo/pato/pato-base.owl>)
Import(<http://purl.obolibrary.org/obo/cl/cl-base.owl>)
Import(<http://purl.obolibrary.org/obo/bspo.owl>)
Import(<http://purl.obolibrary.org/obo/go/go-base.owl>)
Import(<http://purl.obolibrary.org/obo/go/imports/chebi_import.owl>)
Import(<http://purl.obolibrary.org/obo/hp/hp-base.owl>)
Import(<http://purl.obolibrary.org/obo/mondo/mondo-base.owl>)
Import(<http://purl.obolibrary.org/obo/chebi.owl>)
Import(<http://purl.obolibrary.org/obo/ro/ro-base.owl>)
Import(<http://purl.obolibrary.org/obo/eco/eco-base.owl>)
Import(<http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-caro.owl>)
Import(<http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-caro.owl>)
Import(<http://purl.obolibrary.org/obo/go/extensions/go-bfo-bridge.owl>)
Import(<http://purl.obolibrary.org/obo/ncbitaxon/subsets/taxslim.owl>)
Import(<http://purl.obolibrary.org/obo/ncbitaxon/subsets/taxslim-disjoint-over-in-taxon.owl>)
Import(<http://purl.obolibrary.org/obo/wbbt/wbbt-base.owl>)
Import(<http://purl.obolibrary.org/obo/wbphenotype/wbphenotype-base.owl>)
Import(<http://purl.obolibrary.org/obo/wbls/wbls-base.owl>)
Import(<http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-wbbt.owl>)
Import(<http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-wbbt.owl>)
Import(<http://purl.obolibrary.org/obo/ddanat.owl>)
Import(<http://purl.obolibrary.org/obo/zfa.owl>)
Import(<http://purl.obolibrary.org/obo/emapa.owl>)
Import(<http://purl.obolibrary.org/obo/go/noctua/neo.owl>)
Import(<http://purl.obolibrary.org/obo/go/snapshot/extensions/reacto.owl>)
# The rest of this stuff needs to be separated out into its own ontology at GO
Declaration(Class(<http://purl.obolibrary.org/obo/IAO_0000311>))
Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/IAO_0000136>))
Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/SEPIO_0000124>))
############################
# Object Properties
############################
# Object Property: <http://purl.obolibrary.org/obo/IAO_0000136> (is about)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/IAO_0000136> "is about"@en)
# Object Property: <http://purl.obolibrary.org/obo/SEPIO_0000124> (has supporting reference)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/SEPIO_0000124> "has supporting reference"@en)
############################
# Classes
############################
# Class: <http://purl.obolibrary.org/obo/DDANAT_0000401> (cell)
EquivalentClasses(<http://purl.obolibrary.org/obo/DDANAT_0000401> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CL_0000003> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/NCBITaxon_44689>)))
# Class: <http://purl.obolibrary.org/obo/DDANAT_0010001> (Dictyostelium discoideum anatomical structure)
EquivalentClasses(<http://purl.obolibrary.org/obo/DDANAT_0010001> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CARO_0000006> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/NCBITaxon_44689>)))
# Class: <http://purl.obolibrary.org/obo/EMAPA_0> (Anatomical structure)
SubClassOf(<http://purl.obolibrary.org/obo/EMAPA_0> <http://purl.obolibrary.org/obo/CARO_0000000>)
SubClassOf(<http://purl.obolibrary.org/obo/EMAPA_0> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CARO_0000000> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/NCBITaxon_10090>)))
# Class: <http://purl.obolibrary.org/obo/IAO_0000311> (publication)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/IAO_0000311> "publication"@en)
# Class: <http://purl.obolibrary.org/obo/PO_0025131> (plant anatomical entity)
EquivalentClasses(<http://purl.obolibrary.org/obo/PO_0025131> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CARO_0000000> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/NCBITaxon_33090>)))
# Class: <http://purl.obolibrary.org/obo/PO_0025606> (native plant cell)
EquivalentClasses(<http://purl.obolibrary.org/obo/PO_0025606> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CL_0000003> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/NCBITaxon_33090>)))
# Class: <http://purl.obolibrary.org/obo/ZFA_0009000> (cell)
EquivalentClasses(<http://purl.obolibrary.org/obo/ZFA_0009000> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CL_0000003> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/NCBITaxon_7955>)))
# Class: <http://purl.obolibrary.org/obo/ZFA_0100000> (zebrafish anatomical entity)
EquivalentClasses(<http://purl.obolibrary.org/obo/ZFA_0100000> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CARO_0000000> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002162> <http://purl.obolibrary.org/obo/NCBITaxon_7955>)))
SubClassOf(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/emapa#ends_at> <http://purl.obolibrary.org/obo/TS_0>) <http://purl.obolibrary.org/obo/EMAPA_0>)
SubClassOf(ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/emapa#starts_at> <http://purl.obolibrary.org/obo/TS_0>) <http://purl.obolibrary.org/obo/EMAPA_0>)
)