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@caherzee caherzee released this 21 Nov 14:23
· 81 commits to master since this release
v3.04
81eace9

elPrep binaries compiled with Go 1.9.2.

Added 3 new filters:
--filter-non-overlapping-reads bed-file: Removes all reads of which the positions do not overlap with any region specified in a given .bed file.
--remove-optional-fields [all | list]: Removes from reads either all optional fields or all optional fields specified in a given list.
--keep-optional-fields [none | list]: Removes from reads either all optional fields or all optional fields except those specified in a given list.

Added .bed file parsing and representation.

Fixed minor bug with PG header lines.

Many thanks to Leonor Palmeira for testing.

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