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First pass at SWEET-ENVO cryosphere SSSOM #1397

Merged
merged 8 commits into from
Dec 21, 2022
Merged

First pass at SWEET-ENVO cryosphere SSSOM #1397

merged 8 commits into from
Dec 21, 2022

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pbuttigieg
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Closes #1396

The SSSOM needs review and a header for provenance.
Some format cleanup also needed.

@pbuttigieg pbuttigieg requested review from rduerr and kaiiam December 14, 2022 20:04
@pbuttigieg pbuttigieg self-assigned this Dec 14, 2022
@pbuttigieg pbuttigieg linked an issue Dec 14, 2022 that may be closed by this pull request
@rduerr
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rduerr commented Dec 16, 2022

Waiting for ORCID from Carolyn

I think this is the last add, so will accept pull shortly
rduerr
rduerr previously approved these changes Dec 19, 2022
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OK, so some of the comments have periods at the ends and others don't. I personally don't have a problem with that; but if others do, now would be the time to speak up.

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Looks good, thanks @rduerr !

@pbuttigieg pbuttigieg merged commit dbc4230 into master Dec 21, 2022
@pbuttigieg pbuttigieg deleted the issue-1396 branch December 21, 2022 20:01
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kaiiam commented Dec 23, 2022

Looks decent one small not which would be more in-line with conventions but maybe not necessary would be to use curie for ENVO individually instead of OBO that way the mappings Id lines would look like

ENVO:01001610 instead of obo:ENVO_01001610

I could fix this if we feel its useful.

obo:ENVO_03400006 lake-effect snowfall sweet:phenAtmoPrecipitation/LakeEffectSnow LakeEffectSnow skos:closeMatch HumanCurated "Candidate Exact match. In SWEET there is a long comment which should be turned into a definition. SWEET talks about snow bands not the snow itself."
obo:ENVO_03400008 lambing storm sweet:phenAtmoPrecipitation/LambingStorm LambingStorm skos:closeMatch HumanCurated "Candidate Exact match. SWEET needs a definition and depending on what that becomes this could become exact match"
obo:ENVO_01001547 land ice mass sweet:realmCryo/LandIce LandIce skos:closeMatch HumanCurated "The SWEET definition is limited to the Earth while much of that text is a comment in ENVO and ENVO isn't scoped to the Earth"
obo:ENVO_00000298 marine iceberg sweet:realmCryo/Iceberg Iceberg skos:closeMatch HumanCurated "SWEET doesn't have this level of granularity"
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I don't understand the comment on granularity

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I think it just refers to the precision of the match where ENVO has the more specific term marine iceberg and sweet only iceberg.

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+1 @kaiiam

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Please add this ENVO/SWEET xls file to the mappings directory
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