From 9ffbeee459102b2151a5735e0ad74c0e0fb53b9c Mon Sep 17 00:00:00 2001
From: pbuttigieg
Date: Tue, 6 Feb 2018 01:20:50 +0100
Subject: [PATCH] major updates aligning to BFO and deconvoluting sites and
systems, several issues addressed en passant
---
src/envo/envo-edit.owl | 662 +++++++++++++++++++-------------
src/envo/imports/pco_import.owl | 12 -
2 files changed, 399 insertions(+), 275 deletions(-)
diff --git a/src/envo/envo-edit.owl b/src/envo/envo-edit.owl
index 61f1bad2..9df20eee 100644
--- a/src/envo/envo-edit.owl
+++ b/src/envo/envo-edit.owl
@@ -2531,6 +2531,27 @@ Declaration(Class())
Declaration(Class())
Declaration(Class())
Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
+Declaration(Class())
Declaration(Class())
Declaration(Class())
Declaration(Class())
@@ -3643,7 +3664,7 @@ AnnotationAssertion( "USGS:SDTS"^^xsd:string) "seep"^^xsd:string)
AnnotationAssertion( "ENVO:00000027"^^xsd:string)
AnnotationAssertion(rdfs:label "spring"^^xsd:string)
-SubClassOf( )
+SubClassOf( )
# Class: (sand pit quarry)
@@ -3861,7 +3882,7 @@ SubClassOf( ObjectSomeValuesFrom(<
# Class: (marsh)
-AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Marsh"^^xsd:string) "A wetland, featuring grasses, rushes, reeds, typhas, sedges, and other herbaceous plants (possibly with low-growing woody plants) in a context of shallow water."^^xsd:string)
+AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Marsh"^^xsd:string) "A wetland ecosystem which includes communities of grasses, rushes, reeds, typhas, sedges, and other herbaceous plants (possibly with low-growing woody plants)."^^xsd:string)
AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "wetland"^^xsd:string)
AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "wetland"^^xsd:string)
AnnotationAssertion( "EcoLexicon:marsh"^^xsd:string)
@@ -3874,14 +3895,12 @@ AnnotationAssertion( "SWEETRealm:Marsh"^^xsd:string)
AnnotationAssertion( "TGN:21322"^^xsd:string)
AnnotationAssertion( "https://en.wikipedia.org/wiki/Marsh"^^xsd:string)
-AnnotationAssertion( "ENVO"^^xsd:string)
AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "Marsh"^^xsd:string)
AnnotationAssertion(Annotation( "Geonames:feature"^^xsd:string) "marsh"^^xsd:string)
AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "quagmire"^^xsd:string)
AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "quagmire"^^xsd:string)
-AnnotationAssertion( "ENVO:00000035"^^xsd:string)
AnnotationAssertion(rdfs:label "marsh"^^xsd:string)
-SubClassOf( )
+SubClassOf( )
# Class: (irrigation canal)
@@ -4014,82 +4033,14 @@ AnnotationAssertion( "drainage canal"^^xsd:string)
SubClassOf( )
-# Class: (wetland)
-
-AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Wetland"^^xsd:string) "An area that is inundated or saturated by surface or ground water at a frequency and duration sufficient to support, and that under normal circumstances do support, a prevalence of vegetation typically adapted for life in saturated soil conditions."^^xsd:string)
-AnnotationAssertion( "EcoLexicon:wetland"^^xsd:string)
-AnnotationAssertion( "FTT:1001"^^xsd:string)
-AnnotationAssertion( "FTT:1060"^^xsd:string)
-AnnotationAssertion( "FTT:1061"^^xsd:string)
-AnnotationAssertion( "FTT:1118"^^xsd:string)
-AnnotationAssertion( "FTT:1180"^^xsd:string)
-AnnotationAssertion( "FTT:1190"^^xsd:string)
-AnnotationAssertion( "FTT:1206"^^xsd:string)
-AnnotationAssertion( "FTT:1207"^^xsd:string)
-AnnotationAssertion( "FTT:1226"^^xsd:string)
-AnnotationAssertion( "FTT:184"^^xsd:string)
-AnnotationAssertion( "FTT:185"^^xsd:string)
-AnnotationAssertion( "FTT:228"^^xsd:string)
-AnnotationAssertion( "FTT:281"^^xsd:string)
-AnnotationAssertion( "FTT:480"^^xsd:string)
-AnnotationAssertion( "FTT:716"^^xsd:string)
-AnnotationAssertion( "FTT:883"^^xsd:string)
-AnnotationAssertion( "FTT:934"^^xsd:string)
-AnnotationAssertion( "FTT:945"^^xsd:string)
-AnnotationAssertion( "FTT:983"^^xsd:string)
-AnnotationAssertion( "Geonames:H.WTLD"^^xsd:string)
-AnnotationAssertion( "LTER:630"^^xsd:string)
-AnnotationAssertion( "SPIRE:Bog"^^xsd:string)
-AnnotationAssertion( "SWEETRealm:Wetland"^^xsd:string)
-AnnotationAssertion( "TGN:21301"^^xsd:string)
-AnnotationAssertion( "TGN:21304"^^xsd:string)
-AnnotationAssertion( "TGN:21305"^^xsd:string)
-AnnotationAssertion( "https://en.wikipedia.org/wiki/Wetland"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "WETLAND"^^xsd:string)
-AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "Wetland"^^xsd:string)
-AnnotationAssertion(Annotation( "Geonames:feature"^^xsd:string) "wetland"^^xsd:string)
-AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "EstuarineWetland"^^xsd:string)
-AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "LacustrineWetland"^^xsd:string)
-AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "MarineWetland"^^xsd:string)
-AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "PalustrineWetland"^^xsd:string)
-AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "RiparianWetland"^^xsd:string)
-AnnotationAssertion(Annotation( "NASA:earthrealm"^^xsd:string) "TerrestialWetland"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "back marsh"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "backswamp"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "backwater"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "barrier flat"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "blanket bog"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "bog"^^xsd:string)
-AnnotationAssertion(Annotation( "Getty:TGN"^^xsd:string) "bog"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "cienaga"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "dismal"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "everglade"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "floating marsh"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "forested wetland"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "marsh"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "mire"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "mire"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "mud flat"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "peat cutting area"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "peatland"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "quagmire"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "quagmire"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "quaking bog"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "riparian area"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string) "slash"^^xsd:string)
-AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "slough"^^xsd:string)
-AnnotationAssertion(Annotation( "Getty:TGN"^^xsd:string) "slough"^^xsd:string)
-AnnotationAssertion(Annotation( "USGS:SDTS"^^xsd:string)