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where is update_bazel_configs.sh? #38

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hotwa opened this issue Dec 20, 2024 · 2 comments
Open

where is update_bazel_configs.sh? #38

hotwa opened this issue Dec 20, 2024 · 2 comments

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@hotwa
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hotwa commented Dec 20, 2024

I try install LilyMol to bind python3,but I can not find update_bazel_configs.sh

@hotwa
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hotwa commented Dec 20, 2024

TestLinearFingerprint.TestPathsCanCross

FAIL: //Molecule_Lib:linear_fingerprint_test (Exit 1) (see /home/mambauser/.cache/bazel/_bazel_mambauser/bdd4fefeb3e65341423879a83b4db774/execroot/_main/bazel-out/k8-opt/testlogs/Molecule_Lib/linear_fingerprint_test/test.log)
Python unit tests complete

/home/mambauser/.cache/bazel/_bazel_mambauser/bdd4fefeb3e65341423879a83b4db774/execroot/_main/bazel-out/k8-opt/testlogs/Molecule_Lib/linear_fingerprint_test/test.log content is

exec ${PAGER:-/usr/bin/less} "$0" || exit 1
Executing tests from //Molecule_Lib:linear_fingerprint_test
-----------------------------------------------------------------------------
Running main() from gmock_main.cc
[==========] Running 15 tests from 1 test suite.
[----------] Global test environment set-up.
[----------] 15 tests from TestLinearFingerprint
[ RUN      ] TestLinearFingerprint.EmptyMolecule
[       OK ] TestLinearFingerprint.EmptyMolecule (1 ms)
[ RUN      ] TestLinearFingerprint.TestSingleAtom
[       OK ] TestLinearFingerprint.TestSingleAtom (0 ms)
[ RUN      ] TestLinearFingerprint.TestOneAtomExcluded
[       OK ] TestLinearFingerprint.TestOneAtomExcluded (0 ms)
[ RUN      ] TestLinearFingerprint.TestSingleAtomCType
[       OK ] TestLinearFingerprint.TestSingleAtomCType (0 ms)
[ RUN      ] TestLinearFingerprint.TestFragments
[       OK ] TestLinearFingerprint.TestFragments (0 ms)
[ RUN      ] TestLinearFingerprint.TestBenzene
[       OK ] TestLinearFingerprint.TestBenzene (0 ms)
[ RUN      ] TestLinearFingerprint.TestButane
[       OK ] TestLinearFingerprint.TestButane (0 ms)
[ RUN      ] TestLinearFingerprint.TestMinPathTooLong
[       OK ] TestLinearFingerprint.TestMinPathTooLong (0 ms)
[ RUN      ] TestLinearFingerprint.TestMinMaxSame
[       OK ] TestLinearFingerprint.TestMinMaxSame (0 ms)
[ RUN      ] TestLinearFingerprint.TestPathSameAsMol
[       OK ] TestLinearFingerprint.TestPathSameAsMol (0 ms)
[ RUN      ] TestLinearFingerprint.TestMissingCentreAtom
[       OK ] TestLinearFingerprint.TestMissingCentreAtom (0 ms)
[ RUN      ] TestLinearFingerprint.TestRingBitsWithNoRings
[       OK ] TestLinearFingerprint.TestRingBitsWithNoRings (0 ms)
[ RUN      ] TestLinearFingerprint.TestRingCaseWithoutRingsRequested
[       OK ] TestLinearFingerprint.TestRingCaseWithoutRingsRequested (0 ms)
[ RUN      ] TestLinearFingerprint.TestRingCaseWithRingsRequested
[       OK ] TestLinearFingerprint.TestRingCaseWithRingsRequested (0 ms)
[ RUN      ] TestLinearFingerprint.TestPathsCanCross
Molecule_Lib/linear_fingerprint_test.cc:373: Failure
Expected equality of these values:
  _sfc.nbits()
    Which is: 5
  8l
    Which is: 8

Molecule_Lib/linear_fingerprint_test.cc:376: Failure
Expected equality of these values:
  _fingerprint
    Which is: { '.' (46, 0x2E), '2' (50, 0x32), 'q' (113, 0x71), 'm' (109, 0x6D), 'q' (113, 0x71), 'b' (98, 0x62), 'n' (110, 0x6E), 'Y' (89, 0x59), 'E' (69, 0x45), 'o' (111, 0x6F), 'F' (70, 0x46), 'z' (122, 0x7A), '8' (56, 0x38), 'b' (98, 0x62), 'J' (74, 0x4A), 'e' (101, 0x65), 'U' (85, 0x55), 'L' (76, 0x4C), '2' (50, 0x32), '6' (54, 0x36), 'W' (87, 0x57), '.' (46, 0x2E), 'c' (99, 0x63), '5' (53, 0x35), '0' (48, 0x30), 'U' (85, 0x55), 'L' (76, 0x4C), 'y' (121, 0x79), '+' (43, 0x2B), 'p' (112, 0x70), '.' (46, 0x2E), 's' (115, 0x73), ... }
  ".2qmqU8IRbE2qtg4TCF1F+.4.URz8bJeUL26W6Crz7vy+p.s0UY2+k..1"
    Which is: 0x55b253d48508
 got .2qmqbnYEoFz8bJeUL26W.c50ULy+p.s+k......1

[  FAILED  ] TestLinearFingerprint.TestPathsCanCross (0 ms)
[----------] 15 tests from TestLinearFingerprint (2 ms total)

[----------] Global test environment tear-down
[==========] 15 tests from 1 test suite ran. (2 ms total)
[  PASSED  ] 14 tests.
[  FAILED  ] 1 test, listed below:
[  FAILED  ] TestLinearFingerprint.TestPathsCanCross

 1 FAILED TEST

@xuyan-ru
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I try install LilyMol to bind python3,but I can not find update_bazel_configs.sh

Hi @hotwa, update_bazel_configs.sh should be deprecated and removed from the latest repo and the build process should be merged into build_linux.sh.

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