Unexpected error: <class 'KeyError'>

[gracedai23]

Some of my files have been able to run through the entire lineage_wf pipeline, however about 1/4 of them did not and kept running into this issue:

[2023-07-12 00:03:31] INFO: [CheckM - lineage_set] Inferring lineage-specific marker sets.
[2023-07-12 00:03:31] INFO: Reading HMM info from file.
[2023-07-12 00:03:31] INFO: Parsing HMM hits to marker genes:
[2023-07-12 00:03:31] INFO: Determining marker sets for each genome bin.

Unexpected error: <class 'KeyError'>

I've tried increasing memory to 45 GB, which should be more than enough according to the documentation. What else could be the issue?

[pwzation]

For me, remove the storage and output file of the first time can work. In my view, when you firstly try it with a wrong output filefolder, the second time checkM will have some trouble on it