2022-06-24 08:32:29,919 UTC [635801] INFO esmvalcore._main:473 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2022-06-24 08:32:29,920 UTC [635801] INFO esmvalcore._main:474 Package versions 2022-06-24 08:32:29,920 UTC [635801] INFO esmvalcore._main:475 ---------------- 2022-06-24 08:32:29,920 UTC [635801] INFO esmvalcore._main:476 ESMValCore: 2.5.0 2022-06-24 08:32:29,920 UTC [635801] INFO esmvalcore._main:478 ESMValTool: 2.5.0 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:479 ---------------- 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:480 Using config file /home/b/b309141/config/icon.yml 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:481 Writing program log files to: /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/run/main_log.txt /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/run/main_log_debug.txt 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:86 Starting the Earth System Model Evaluation Tool at time: 2022-06-24 08:32:29 UTC 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:90 ---------------------------------------------------------------------- 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:91 RECIPE = /home/b/b309141/recipes/recipe_icon_preprocs.yml 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:92 RUNDIR = /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/run 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:93 WORKDIR = /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/work 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:94 PREPROCDIR = /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:95 PLOTDIR = /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/plots 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:96 ---------------------------------------------------------------------- 2022-06-24 08:32:29,921 UTC [635801] INFO esmvalcore._main:100 Running tasks using at most 16 processes 2022-06-24 08:32:29,922 UTC [635801] INFO esmvalcore._main:102 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2022-06-24 08:32:29,922 UTC [635801] INFO esmvalcore._main:105 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2022-06-24 08:32:29,925 UTC [635801] DEBUG esmvalcore._recipe_checks:47 Checking recipe against schema /home/b/b309141/repos/ESMValCore/esmvalcore/recipe_schema.yml 2022-06-24 08:32:29,957 UTC [635801] DEBUG esmvalcore._recipe:1342 Retrieving diagnostics from recipe 2022-06-24 08:32:29,957 UTC [635801] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic test 2022-06-24 08:32:29,959 UTC [635801] DEBUG esmvalcore._config._config:48 Loading extra facets from /home/b/b309141/repos/ESMValCore/esmvalcore/_config/extra_facets/icon-mappings.yml 2022-06-24 08:32:29,962 UTC [635801] INFO esmvalcore._recipe:1845 Creating tasks from recipe 2022-06-24 08:32:29,962 UTC [635801] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic test 2022-06-24 08:32:29,962 UTC [635801] INFO esmvalcore._recipe:1825 Creating preprocessor task test/test 2022-06-24 08:32:29,962 UTC [635801] INFO esmvalcore._recipe:1214 Creating preprocessor 'test' task for variable 'ta' 2022-06-24 08:32:29,964 UTC [635801] DEBUG esmvalcore._data_finder:19 Looking for files matching ['cool014_atm_3d_ml*.nc'] in ['/home/b/b309141/work/icon_eval/data/'] 2022-06-24 08:32:29,965 UTC [635801] DEBUG esmvalcore._recipe:624 Using input files for variable ta of dataset ICON: /home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc 2022-06-24 08:32:29,966 UTC [635801] INFO esmvalcore._recipe:633 Found input files for ICON 2022-06-24 08:32:29,983 UTC [635801] INFO esmvalcore._recipe:1095 PreprocessingTask test/test created. 2022-06-24 08:32:29,983 UTC [635801] DEBUG esmvalcore._recipe:1096 PreprocessingTask test/test will create the files: /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc 2022-06-24 08:32:29,983 UTC [635801] INFO esmvalcore._recipe:1894 These tasks will be executed: test/test 2022-06-24 08:32:29,984 UTC [635801] DEBUG esmvalcore._main:122 Recipe summary: PreprocessingTask: test/test order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'zonal_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980_fixed']}, 'clip_timerange': {'timerange': '1979/1980'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'ICON', 'frequency': 'mon', 'mip': 'Amon', 'short_name': 'ta'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'ICON', 'frequency': 'mon', 'mip': 'Amon', 'short_name': 'ta'}, 'concatenate': {}, 'fix_data': {'alias': 'ICON', 'check_level': , 'dataset': 'ICON', 'diagnostic': 'test', 'filename': '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc', 'frequency': 'mon', 'long_name': 'Air Temperature', 'mip': 'Amon', 'modeling_realm': ['atmos'], 'original_short_name': 'ta', 'preprocessor': 'test', 'project': 'ICON', 'recipe_dataset_index': 0, 'short_name': 'ta', 'simulation': 'cool014_atm_3d_ml', 'standard_name': 'air_temperature', 'timerange': '1979/1980', 'units': 'K', 'variable_group': 'test'}, 'fix_file': {'alias': 'ICON', 'dataset': 'ICON', 'diagnostic': 'test', 'filename': '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc', 'frequency': 'mon', 'long_name': 'Air Temperature', 'mip': 'Amon', 'modeling_realm': ['atmos'], 'original_short_name': 'ta', 'output_dir': '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980_fixed', 'preprocessor': 'test', 'project': 'ICON', 'recipe_dataset_index': 0, 'short_name': 'ta', 'simulation': 'cool014_atm_3d_ml', 'standard_name': 'air_temperature', 'timerange': '1979/1980', 'units': 'K', 'variable_group': 'test'}, 'fix_metadata': {'alias': 'ICON', 'check_level': , 'dataset': 'ICON', 'diagnostic': 'test', 'filename': '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc', 'frequency': 'mon', 'long_name': 'Air Temperature', 'mip': 'Amon', 'modeling_realm': ['atmos'], 'original_short_name': 'ta', 'preprocessor': 'test', 'project': 'ICON', 'recipe_dataset_index': 0, 'short_name': 'ta', 'simulation': 'cool014_atm_3d_ml', 'standard_name': 'air_temperature', 'timerange': '1979/1980', 'units': 'K', 'variable_group': 'test'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc'}, 'zonal_statistics': {'operator': 'mean'}} ancestors: None 2022-06-24 08:32:29,985 UTC [635801] INFO esmvalcore._task:747 Running 1 tasks using 1 processes 2022-06-24 08:32:29,997 UTC [636020] INFO esmvalcore._task:260 Starting task test/test in process [636020] 2022-06-24 08:32:29,999 UTC [636020] DEBUG esmvalcore.preprocessor:596 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'zonal_statistics', 'remove_fx_variables'] 2022-06-24 08:32:29,999 UTC [636020] DEBUG esmvalcore.preprocessor:603 Applying single-model steps to PreprocessorFile: /home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc 2022-06-24 08:32:29,999 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step fix_file 2022-06-24 08:32:30,000 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'fix_file' on the data '/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc' with function argument(s) short_name = 'ta', mip = 'Amon', preprocessor = 'test', variable_group = 'test', diagnostic = 'test', project = 'ICON', dataset = 'ICON', simulation = 'cool014_atm_3d_ml', recipe_dataset_index = 0, timerange = '1979/1980', alias = 'ICON', original_short_name = 'ta', standard_name = 'air_temperature', long_name = 'Air Temperature', units = 'K', modeling_realm = ['atmos'], frequency = 'mon', filename = '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc', output_dir = '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980_fixed' 2022-06-24 08:32:30,004 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step load 2022-06-24 08:32:30,004 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'load' on the data '/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc' with function argument(s) callback = 2022-06-24 08:32:30,004 UTC [636020] DEBUG esmvalcore.preprocessor._io:139 Loading: /home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc 2022-06-24 08:32:30,088 UTC [636020] DEBUG esmvalcore.preprocessor._io:169 Done with loading /home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc 2022-06-24 08:32:30,089 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step fix_metadata 2022-06-24 08:32:30,094 UTC [635801] INFO esmvalcore._task:779 Progress: 1 tasks running, 0 tasks waiting for ancestors, 0/1 done 2022-06-24 08:32:30,097 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'fix_metadata' on the data [, , , , , , , , , , , , ] loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) short_name = 'ta', mip = 'Amon', preprocessor = 'test', variable_group = 'test', diagnostic = 'test', project = 'ICON', dataset = 'ICON', simulation = 'cool014_atm_3d_ml', recipe_dataset_index = 0, timerange = '1979/1980', alias = 'ICON', original_short_name = 'ta', standard_name = 'air_temperature', long_name = 'Air Temperature', units = 'K', modeling_realm = ['atmos'], frequency = 'mon', filename = '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc', check_level = 2022-06-24 08:32:30,101 UTC [636020] DEBUG esmvalcore.cmor._fixes.icon._base_fixes:115 Using cached ICON grid file '/home/b/b309141/.esmvaltool/cache/icon_grid_0043_R02B04_G.nc' 2022-06-24 08:32:39,900 UTC [636020] DEBUG esmvalcore.cmor.check:277 There were metadata changes in variable ta: Coordinate longitude appears to belong to an unstructured grid. Skipping monotonicity and direction tests. Coordinate latitude appears to belong to an unstructured grid. Skipping monotonicity and direction tests. loaded from file /home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc 2022-06-24 08:32:39,900 UTC [636020] WARNING esmvalcore.cmor.check:259 There were warnings in variable ta: Cannot check requested values of 3D coordinate plev since it is not 1D loaded from file /home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc 2022-06-24 08:32:39,903 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step concatenate 2022-06-24 08:32:39,904 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) 2022-06-24 08:32:39,904 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step cmor_check_metadata 2022-06-24 08:32:39,905 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) cmor_table = 'ICON', mip = 'Amon', short_name = 'ta', frequency = 'mon', check_level = 2022-06-24 08:32:40,144 UTC [636020] DEBUG esmvalcore.cmor.check:277 There were metadata changes in variable ta: Coordinate longitude appears to belong to an unstructured grid. Skipping monotonicity and direction tests. Coordinate latitude appears to belong to an unstructured grid. Skipping monotonicity and direction tests. loaded from file 2022-06-24 08:32:40,144 UTC [636020] WARNING esmvalcore.cmor.check:259 There were warnings in variable ta: Cannot check requested values of 3D coordinate plev since it is not 1D loaded from file 2022-06-24 08:32:40,144 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step clip_timerange 2022-06-24 08:32:40,144 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) timerange = '1979/1980' 2022-06-24 08:32:40,476 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step fix_data 2022-06-24 08:32:40,477 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) short_name = 'ta', mip = 'Amon', preprocessor = 'test', variable_group = 'test', diagnostic = 'test', project = 'ICON', dataset = 'ICON', simulation = 'cool014_atm_3d_ml', recipe_dataset_index = 0, timerange = '1979/1980', alias = 'ICON', original_short_name = 'ta', standard_name = 'air_temperature', long_name = 'Air Temperature', units = 'K', modeling_realm = ['atmos'], frequency = 'mon', filename = '/home/b/b309141/scratch/esmvaltool_output/recipe_icon_preprocs_20220624_083228/preproc/test/test/ICON_cool014_atm_3d_ml_Amon_ta_1979-1980.nc', check_level = 2022-06-24 08:32:40,477 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step cmor_check_data 2022-06-24 08:32:40,478 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) cmor_table = 'ICON', mip = 'Amon', short_name = 'ta', frequency = 'mon', check_level = 2022-06-24 08:32:40,478 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step add_fx_variables 2022-06-24 08:32:40,479 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) fx_variables = {}, check_level = 2022-06-24 08:32:40,479 UTC [636020] DEBUG esmvalcore.preprocessor:343 Running preprocessor step zonal_statistics 2022-06-24 08:32:40,479 UTC [636020] DEBUG esmvalcore.preprocessor:304 Running preprocessor function 'zonal_statistics' on the data loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) operator = 'mean' 2022-06-24 08:32:40,510 UTC [636020] WARNING py.warnings:109 /work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py:2220: UserWarning: Collapsing a non-contiguous coordinate. Metadata may not be fully descriptive for 'first spatial index for variables stored on an unstructured grid'. 2022-06-24 08:32:40,510 UTC [636020] WARNING py.warnings:109 /work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py:2214: UserWarning: Collapsing a multi-dimensional coordinate. Metadata may not be fully descriptive for 'air_pressure'. 2022-06-24 08:32:40,533 UTC [636020] ERROR esmvalcore.preprocessor:334 Failed to run preprocessor function 'zonal_statistics' on the data [] loaded from original input file(s) ['/home/b/b309141/work/icon_eval/data/cool014_atm_3d_ml_1979-2014.nc'] with function argument(s) operator = 'mean' 2022-06-24 08:32:41,510 UTC [635801] INFO esmvalcore._task:127 Maximum memory used (estimate): 4.0 GB 2022-06-24 08:32:41,511 UTC [635801] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2022-06-24 08:32:41,512 UTC [635801] ERROR esmvalcore._main:511 Program terminated abnormally, see stack trace below for more information: multiprocessing.pool.RemoteTraceback: """ Traceback (most recent call last): File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) File "/home/b/b309141/repos/ESMValCore/esmvalcore/_task.py", line 796, in _run_task output_files = task.run() File "/home/b/b309141/repos/ESMValCore/esmvalcore/_task.py", line 263, in run self.output_files = self._run(input_files) File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 606, in _run product.apply(step, self.debug) File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 417, in apply self.cubes = preprocess(self.cubes, step, File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 353, in preprocess result.append(_run_preproc_function(function, item, settings, File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 309, in _run_preproc_function return function(items, **kwargs) File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/_area.py", line 148, in zonal_statistics cube = cube.collapsed('longitude', operation) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/cube.py", line 3744, in collapsed collapsed_cube.replace_coord(coord.collapsed(local_dims)) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 2215, in collapsed elif not self.is_contiguous(): File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 2018, in is_contiguous contiguous, _ = self._discontiguity_in_bounds(rtol=rtol, atol=atol) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 1944, in _discontiguity_in_bounds self._sanity_check_bounds() File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 1900, in _sanity_check_bounds raise ValueError( ValueError: Invalid operation for 'latitude', with 3 bound(s). Contiguous bounds are only defined for 1D coordinates with 2 bounds. """ The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/home/b/b309141/repos/ESMValCore/esmvalcore/_main.py", line 499, in run fire.Fire(ESMValTool()) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/fire/core.py", line 141, in Fire component_trace = _Fire(component, args, parsed_flag_args, context, name) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/fire/core.py", line 466, in _Fire component, remaining_args = _CallAndUpdateTrace( File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/fire/core.py", line 681, in _CallAndUpdateTrace component = fn(*varargs, **kwargs) File "/home/b/b309141/repos/ESMValCore/esmvalcore/_main.py", line 443, in run process_recipe(recipe_file=recipe, config_user=cfg) File "/home/b/b309141/repos/ESMValCore/esmvalcore/_main.py", line 124, in process_recipe recipe.run() File "/home/b/b309141/repos/ESMValCore/esmvalcore/_recipe.py", line 1921, in run self.tasks.run(max_parallel_tasks=self._cfg['max_parallel_tasks']) File "/home/b/b309141/repos/ESMValCore/esmvalcore/_task.py", line 725, in run self._run_parallel(max_parallel_tasks) File "/home/b/b309141/repos/ESMValCore/esmvalcore/_task.py", line 768, in _run_parallel _copy_results(task, running[task]) File "/home/b/b309141/repos/ESMValCore/esmvalcore/_task.py", line 791, in _copy_results task.output_files, task.products = future.get() File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/multiprocessing/pool.py", line 771, in get raise self._value File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) File "/home/b/b309141/repos/ESMValCore/esmvalcore/_task.py", line 796, in _run_task output_files = task.run() File "/home/b/b309141/repos/ESMValCore/esmvalcore/_task.py", line 263, in run self.output_files = self._run(input_files) File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 606, in _run product.apply(step, self.debug) File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 417, in apply self.cubes = preprocess(self.cubes, step, File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 353, in preprocess result.append(_run_preproc_function(function, item, settings, File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/__init__.py", line 309, in _run_preproc_function return function(items, **kwargs) File "/home/b/b309141/repos/ESMValCore/esmvalcore/preprocessor/_area.py", line 148, in zonal_statistics cube = cube.collapsed('longitude', operation) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/cube.py", line 3744, in collapsed collapsed_cube.replace_coord(coord.collapsed(local_dims)) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 2215, in collapsed elif not self.is_contiguous(): File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 2018, in is_contiguous contiguous, _ = self._discontiguity_in_bounds(rtol=rtol, atol=atol) File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 1944, in _discontiguity_in_bounds self._sanity_check_bounds() File "/work/bd0854/b309141/mambaforge/envs/esm/lib/python3.10/site-packages/iris/coords.py", line 1900, in _sanity_check_bounds raise ValueError( ValueError: Invalid operation for 'latitude', with 3 bound(s). Contiguous bounds are only defined for 1D coordinates with 2 bounds. 2022-06-24 08:32:41,522 UTC [635801] INFO esmvalcore._main:515 If you have a question or need help, please start a new discussion on https://github.com/ESMValGroup/ESMValTool/discussions If you suspect this is a bug, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues To make it easier to find out what the problem is, please consider attaching the files run/recipe_*.yml and run/main_log_debug.txt from the output directory.