Compiler is intel
Using PFUNIT_PATH: /home/bhillma/codes/pfunit/builds/mpi-serial
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Running cmake for __command_line_test__/__command_line_test__.
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RUN: cmake -C Macros.cmake /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime -DCIME_CMAKE_MODULE_DIRECTORY=/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/CMake -DCMAKE_BUILD_TYPE=CESM_DEBUG -DPFUNIT_MPIRUN='' -DPFUNIT_PATH=/home/bhillma/codes/pfunit/builds/mpi-serial -DUSE_MPI_SERIAL=ON -DENABLE_GENF90=ON -DCMAKE_PROGRAM_PATH=/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/scripts/fortran_unit_testing/../../src/externals/genf90
loading initial cache file Macros.cmake
-- The Fortran compiler identification is Intel 16.0.2.20160204
-- The C compiler identification is Intel 16.0.2.20160204
-- Check for working Fortran compiler: /opt/intel/16.0/bin/intel64/ifort
-- Check for working Fortran compiler: /opt/intel/16.0/bin/intel64/ifort  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /opt/intel/16.0/bin/intel64/ifort supports Fortran 90
-- Checking whether /opt/intel/16.0/bin/intel64/ifort supports Fortran 90 -- yes
-- Check for working C compiler: /opt/intel/16.0/bin/intel64/icc
-- Check for working C compiler: /opt/intel/16.0/bin/intel64/icc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Found pFUnit: /home/bhillma/codes/pfunit/builds/mpi-serial/lib/libpfunit.a  
-- Found NetCDF_C: /projects/sems/install/toss3/sems/tpl/netcdf/4.4.1/intel/16.0.2/exo/lib/libnetcdf.so  
-- Checking NetCDF version
-- Checking NetCDF version - 4.4.1./*!<
-- Checking whether NetCDF has parallel support
-- Checking whether NetCDF has parallel support - no
-- Looking for nc_set_log_level
-- Looking for nc_set_log_level - not found
-- Found NetCDF_Fortran: /projects/sems/install/toss3/sems/tpl/netcdf/4.4.1/intel/16.0.2/exo/lib/libnetcdff.so  
-- Configuring done
-- Generating done
-- Build files have been written to: /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__
Scanning dependencies of target mct_project
Scanning dependencies of target generate_pio
Scanning dependencies of target generate_shr_infnan_mod
[  2%] Generating test_wv_sat.F90
[  2%] Generating test_shr_precip.F90
[  2%] Generating test_wv_sat_each_method.F90
Scanning dependencies of target generate_shr_assert_mod
[  2%] Generating test_shr_abort.F90
[  3%] Creating directories for 'mct_project'
[  5%] Generating shr_assert_mod.F90
[  5%] Generating pio.F90
[  5%] Generating shr_infnan_mod.F90
[  5%] No download step for 'mct_project'
[  5%] Built target generate_shr_infnan_mod
[  5%] Built target generate_shr_assert_mod
[  5%] Built target generate_pio
[  6%] No patch step for 'mct_project'
[  6%] No update step for 'mct_project'
[  6%] Generating test_ndebug.F90
[  7%] Generating test_igamma.F90
[  9%] Generating test_erf_r4.F90
[  9%] Performing configure step for 'mct_project'
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_wv_sat_test/test_wv_sat.pf
Processing fileProcessing file  /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_wv_sat_test/test_wv_sat_each_method.pf/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_abort_test/test_shr_abort.pf
Processing file
 /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_precip_test/test_shr_precip.pf
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_assert_test/test_ndebug.pf
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_abort_test//test_shr_abort.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_precip_test//test_shr_precip.F90
Processing fileProcessing file  /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_spfn_test/test_erf_r4.pf/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_spfn_test/test_igamma.pf

 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_wv_sat_test//test_wv_sat.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_assert_test//test_ndebug.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_wv_sat_test//test_wv_sat_each_method.F90
[  9%] Generating test_erf_r8.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_spfn_test//test_igamma.F90
[  9%] Generating test_assert.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_spfn_test//test_erf_r4.F90
Scanning dependencies of target shr_abort_mod_exe
[ 10%] Generating test_assert_array.F90
[ 10%] Generating test_macro.F90
Scanning dependencies of target shr_wv_sat_mod_exe
[ 10%] Building Fortran object src/share/test/unit/shr_abort_test/CMakeFiles/shr_abort_mod_exe.dir/__/__/__/util/shr_kind_mod.F90.o
Scanning dependencies of target shr_precip_mod_exe
[ 10%] Building Fortran object src/share/test/unit/shr_wv_sat_test/CMakeFiles/shr_wv_sat_mod_exe.dir/__/__/__/util/shr_kind_mod.F90.o
[ 11%] Building Fortran object src/share/test/unit/shr_precip_test/CMakeFiles/shr_precip_mod_exe.dir/__/__/__/util/shr_kind_mod.F90.o
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_spfn_test/test_erf_r8.pf
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_assert_test/test_assert.pf
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_spfn_test//test_erf_r8.F90
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_assert_test/test_macro.pf
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_assert_test/test_assert_array.pf
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_assert_test//test_assert.F90
[ 11%] Generating test_gamma_factorial.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_assert_test//test_macro.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_assert_test//test_assert_array.F90
[ 11%] Building Fortran object src/share/test/unit/shr_wv_sat_test/CMakeFiles/shr_wv_sat_mod_exe.dir/__/__/__/util/shr_wv_sat_mod.F90.o
Scanning dependencies of target infnan_test_exe
[ 12%] Building Fortran object src/share/test/unit/shr_infnan_test/CMakeFiles/infnan_test_exe.dir/__/__/__/util/shr_kind_mod.F90.o
Scanning dependencies of target assert_test_exe
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_spfn_test/test_gamma_factorial.pf
[ 13%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/__/__/__/util/shr_kind_mod.F90.o
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_spfn_test//test_gamma_factorial.F90
Scanning dependencies of target spfn_test_exe
[ 13%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/__/__/util/shr_kind_mod.F90.o
[ 13%] Generating test_shr_string.F90
[ 13%] Building Fortran object src/share/test/unit/shr_precip_test/CMakeFiles/shr_precip_mod_exe.dir/__/__/__/util/shr_const_mod.F90.o
[ 14%] Building Fortran object src/share/test/unit/shr_abort_test/CMakeFiles/shr_abort_mod_exe.dir/__/__/__/unit_test_stubs/util/shr_abort_mod.abortthrows.F90.o
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_string_test/test_shr_string.pf
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_string_test//test_shr_string.F90
[ 14%] Building Fortran object src/share/test/unit/shr_infnan_test/CMakeFiles/infnan_test_exe.dir/__/__/__/__/__/csm_share/shr_infnan_mod.F90.o
Scanning dependencies of target shr_string_exe
[ 15%] Building Fortran object src/share/test/unit/shr_wv_sat_test/CMakeFiles/shr_wv_sat_mod_exe.dir/__/__/__/util/shr_const_mod.F90.o
[ 16%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/__/__/util/shr_kind_mod.F90.o
[ 17%] Building Fortran object src/share/test/unit/shr_precip_test/CMakeFiles/shr_precip_mod_exe.dir/__/__/__/util/shr_precip_mod.F90.o
[ 17%] Building Fortran object src/share/test/unit/shr_abort_test/CMakeFiles/shr_abort_mod_exe.dir/test_shr_abort.F90.o
[ 17%] Building Fortran object src/share/test/unit/shr_precip_test/CMakeFiles/shr_precip_mod_exe.dir/test_shr_precip.F90.o
checking whether the C compiler works... [ 18%] Building Fortran object src/share/test/unit/shr_abort_test/CMakeFiles/shr_abort_mod_exe.dir/home/bhillma/codes/pfunit/builds/mpi-serial/include/driver.F90.o
yes
checking for C compiler default output file name... a.out
checking for suffix of executables... [ 18%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/__/__/__/__/__/csm_share/shr_infnan_mod.F90.o
[ 18%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/__/__/__/__/csm_share/shr_infnan_mod.F90.o
[ 19%] Building Fortran object src/share/test/unit/shr_precip_test/CMakeFiles/shr_precip_mod_exe.dir/home/bhillma/codes/pfunit/builds/mpi-serial/include/driver.F90.o
[ 19%] Linking Fortran executable shr_abort_mod_exe
[ 20%] Building Fortran object src/share/test/unit/shr_wv_sat_test/CMakeFiles/shr_wv_sat_mod_exe.dir/test_wv_sat.F90.o
[ 20%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/__/__/__/__/csm_share/shr_infnan_mod.F90.o

checking whether we are cross compiling... [ 20%] Building Fortran object src/share/test/unit/shr_infnan_test/CMakeFiles/infnan_test_exe.dir/test_infnan.F90.o
[ 20%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/__/__/__/unit_test_stubs/util/shr_abort_mod.abortthrows.F90.o
[ 20%] Linking Fortran executable shr_precip_mod_exe
[ 20%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/__/__/unit_test_stubs/util/shr_abort_mod.abortthrows.F90.o
[ 21%] Linking Fortran executable infnan_test_exe
no
checking for suffix of object files... [ 22%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/__/__/unit_test_stubs/util/shr_abort_mod.abortthrows.F90.o
[ 23%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/__/__/__/util/shr_strconvert_mod.F90.o
[ 23%] Built target shr_abort_mod_exe
[ 24%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/__/mock/shr_sys_mod.nompi_abortthrows.F90.o
[ 25%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/__/__/util/shr_const_mod.F90.o
[ 25%] Building Fortran object src/share/test/unit/shr_wv_sat_test/CMakeFiles/shr_wv_sat_mod_exe.dir/test_wv_sat_each_method.F90.o
o
checking whether we are using the GNU C compiler... [ 26%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/__/__/util/shr_strconvert_mod.F90.o
[ 26%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/mock/shr_sys_mod.nompi_abortthrows.F90.o
[ 27%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/__/__/util/shr_strconvert_mod.F90.o
yes
checking whether /opt/intel/16.0/bin/intel64/icc accepts -g... [ 27%] Built target infnan_test_exe
[ 28%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/__/__/util/shr_spfn_mod.F90.o
[ 29%] Building Fortran object src/share/test/unit/shr_wv_sat_test/CMakeFiles/shr_wv_sat_mod_exe.dir/home/bhillma/codes/pfunit/builds/mpi-serial/include/driver.F90.o
[ 29%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/__/__/util/shr_log_mod.F90.o
[ 30%] Generating test_toString.F90
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_strconvert_test/test_toString.pf
yes
checking for /opt/intel/16.0/bin/intel64/icc option to accept ISO C89... [ 30%] Generating test_error_printers.F90
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_strconvert_test//test_toString.F90
Scanning dependencies of target shr_strconvert_exe
[ 30%] Building Fortran object src/share/test/unit/shr_strconvert_test/CMakeFiles/shr_strconvert_exe.dir/__/__/__/util/shr_kind_mod.F90.o
[ 30%] Built target shr_precip_mod_exe
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/share/test/unit/shr_log_test/test_error_printers.pf
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_log_test//test_error_printers.F90
[ 30%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/__/__/util/shr_log_mod.F90.o
Scanning dependencies of target shr_log_exe
[ 31%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/__/mock/shr_sys_mod.nompi_abortthrows.F90.o
none needed
checking how to run the C preprocessor... [ 33%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/__/__/__/__/csm_share/shr_assert_mod.F90.o
[ 33%] Building Fortran object src/share/test/unit/shr_log_test/CMakeFiles/shr_log_exe.dir/__/__/__/util/shr_kind_mod.F90.o
[ 33%] Linking Fortran executable shr_wv_sat_mod_exe
[ 33%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/__/__/__/util/shr_log_mod.F90.o
[ 34%] Building Fortran object src/share/test/unit/shr_strconvert_test/CMakeFiles/shr_strconvert_exe.dir/__/__/__/__/__/csm_share/shr_infnan_mod.F90.o
[ 34%] Building Fortran object src/share/test/unit/shr_string_test/CMakeFiles/shr_string_exe.dir/__/__/__/util/shr_timer_mod.F90.o
[ 34%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/test_erf_r4.F90.o
[ 35%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/__/__/__/__/__/csm_share/shr_assert_mod.F90.o
[ 35%] Building Fortran object src/share/test/unit/shr_strconvert_test/CMakeFiles/shr_strconvert_exe.dir/__/__/__/util/shr_strconvert_mod.F90.o
[ 35%] Built target shr_wv_sat_mod_exe
[ 36%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/test_erf_r8.F90.o
[ 37%] Generating int_ptr_vector_tests.pf
[ 37%] Building Fortran object src/share/test/unit/shr_strconvert_test/CMakeFiles/shr_strconvert_exe.dir/test_toString.F90.o
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[ 38%] Generating integer_vector_tests.pf
/opt/intel/16.0/bin/intel64/icc -E
[ 38%] Generating r8_vector_tests.pf
[ 38%] Building Fortran object src/share/test/unit/shr_assert_test/CMakeFiles/assert_test_exe.dir/test_assert.F90.o
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[ 39%] Building Fortran object src/share/test/unit/shr_spfn_test/CMakeFiles/spfn_test_exe.dir/test_gamma_factorial.F90.o
[ 40%] Building Fortran object src/share/test/unit/shr_log_test/CMakeFiles/shr_log_exe.dir/__/__/__/util/shr_strconvert_mod.F90.o
[ 40%] Generating int_ptr_vector_tests.F90
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/dynamic_vector/int_ptr_vector_tests.pf
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/dynamic_vector//int_ptr_vector_tests.F90
[ 40%] Generating integer_vector_tests.F90
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/dynamic_vector/integer_vector_tests.pf
[ 40%] Building Fortran object src/share/test/unit/shr_strconvert_test/CMakeFiles/shr_strconvert_exe.dir/home/bhillma/codes/pfunit/builds/mpi-serial/include/driver.F90.o
 ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/dynamic_vector//integer_vector_tests.F90
[ 41%] Generating r8_vector_tests.F90
Scanning dependencies of target vmath_test_exe
[ 42%] Building Fortran object src/share/test/unit/shr_vmath_test/CMakeFiles/vmath_test_exe.dir/__/__/__/util/shr_kind_mod.F90.o
Processing file /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/dynamic_vector/r8_vector_tests.pf
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... [ 42%] Building Fortran object src/share/test/unit/shr_log_test/CMakeFiles/shr_log_exe.dir/__/__/__/util/shr_log_mod.F90.o
/usr/bin/grep -E
checking for ANSI C header files...  ... Done.  Results in /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/dynamic_vector//r8_vector_tests.F90
Scanning dependencies of target dynamic_vector_exe
[ 42%] Building Fortran object src/share/test/unit/dynamic_vector/CMakeFiles/dynamic_vector_exe.dir/__/__/__/util/shr_kind_mod.F90.o
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/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/src/share/test/unit/shr_assert_test/test_ndebug.F90(12): warning #6178: The return value of this FUNCTION has not been defined.   [UNREACHABLE_FUNCTION]
  logical function unreachable_function(macro_name)
-------------------^
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yes
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[ 59%] Building Fortran object src/share/test/unit/dynamic_vector/CMakeFiles/dynamic_vector_exe.dir/integer_vector_tests.F90.o
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[ 60%] Linking Fortran executable vmath_test_exe
yes
checking for memory.h... yes
checking for strings.h... ld: cannot find -lvml
make[2]: *** [src/share/test/unit/shr_vmath_test/vmath_test_exe] Error 1
make[1]: *** [src/share/test/unit/shr_vmath_test/CMakeFiles/vmath_test_exe.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
yes
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yes
checking whether byte ordering is bigendian... [ 61%] Built target dynamic_vector_exe
no
checking whether we are using the GNU Fortran compiler... no
checking whether /opt/intel/16.0/bin/intel64/ifort accepts -g... yes
checking for Fortran flag to compile .F90 files... none
MPISERIAL ENABLED: BYPASSING MPI CHECK
FORT_SIZE IS PRESET TO real4double8
Checking Compiler Version
checking how to get the version output from /opt/intel/16.0/bin/intel64/ifort... -V
checking for Fortran flag to compile preprocessed .F files... none
checking how to define symbols for preprocessed Fortran... -D
checking how to get verbose linking output from /opt/intel/16.0/bin/intel64/ifort... -v
checking for Fortran libraries of /opt/intel/16.0/bin/intel64/ifort...  -L/projects/sems/install/toss3/sems/tpl/netcdf/4.4.1/intel/16.0.2/exo/lib -L/projects/sems/install/toss3/sems/tpl/hdf5/1.8.12/intel/16.0.2/base/lib -L/opt/intel/16.0/compiler/lib/intel64_lin -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/ -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/../../../../lib64 -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/projects/sems/install/toss3/sems/tpl/netcdf/4.4.1/intel/16.0.2/exo/lib/ -L/projects/sems/install/toss3/sems/tpl/hdf5/1.8.12/intel/16.0.2/base/lib/ -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -ldl -lirc_s
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
Hostname=skybridge-login2
Machine=x86_64
OS=Linux
Fortran Compiler is Intel ifort
checking for ranlib... ranlib

Output Variables: {CC=/opt/intel/16.0/bin/intel64/icc} {CFLAGS= -O2 -fp-model precise -std=gnu99 } {FC=/opt/intel/16.0/bin/intel64/ifort} {FCFLAGS= -convert big_endian -assume byterecl -ftz -traceback -assume realloc_lhs -fp-model source -O0 } {PROGFCFLAGS=-assume byterecl}{CPPDEFS= -DSYSLINUX -DCPRINTEL} {OPT=} {DEBUG="-g"} {REAL8=-r8} {BIT64=} {ENDIAN=-convert big_endian} {MPIFC=/opt/intel/16.0/bin/intel64/ifort} {MPILIBS=-L/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/mct/mpi-serial -lmpi-serial} {MPIHEADER=-I/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/mct/mpi-serial} {INCLUDEFLAG=-I} {INCLUDEPATH=} {AR=ar cq} {RANLIB=ranlib} {BABELROOT=} {COMPILER_ROOT=} {PYTHON=} {PYTHONOPTS=} {FORT_SIZE=real4double8} {prefix=/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__} {SRCDIR=/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct} {FC_DEFINE=-D}

MPISERIAL ENABLED: CONFIGURING mpi-serial
configure: creating ./config.status
config.status: creating Makefile.conf
config.status: creating config.h
=== configuring in mpi-serial (/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__/mct/mpi-serial)
configure: running /bin/sh /home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/configure --disable-option-checking '--prefix=/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__'  '--enable-mpiserial' '--enable-debugging' 'CC=/opt/intel/16.0/bin/intel64/icc' 'FC=/opt/intel/16.0/bin/intel64/ifort' 'CFLAGS=  -O2 -fp-model precise -std=gnu99 ' 'FCFLAGS=   -convert big_endian -assume byterecl -ftz -traceback -assume realloc_lhs -fp-model source   -O0 ' 'SRCDIR=/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct' 'DEBUG="-g"' --cache-file=/dev/null --srcdir=/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial
checking for gcc... /opt/intel/16.0/bin/intel64/icc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /opt/intel/16.0/bin/intel64/icc accepts -g... yes
checking for /opt/intel/16.0/bin/intel64/icc option to accept ISO C89... none needed
checking whether we are using the GNU Fortran compiler... no
checking whether /opt/intel/16.0/bin/intel64/ifort accepts -g... yes
checking for ranlib... ranlib
checking how to get verbose linking output from /opt/intel/16.0/bin/intel64/ifort... -v
checking for Fortran libraries of /opt/intel/16.0/bin/intel64/ifort...  -L/projects/sems/install/toss3/sems/tpl/netcdf/4.4.1/intel/16.0.2/exo/lib -L/projects/sems/install/toss3/sems/tpl/hdf5/1.8.12/intel/16.0.2/base/lib -L/opt/intel/16.0/compiler/lib/intel64_lin -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/ -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/../../../../lib64 -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/projects/sems/install/toss3/sems/tpl/netcdf/4.4.1/intel/16.0.2/exo/lib/ -L/projects/sems/install/toss3/sems/tpl/hdf5/1.8.12/intel/16.0.2/base/lib/ -L/opt/rh/devtoolset-3/root/usr/lib/gcc/x86_64-redhat-linux/4.9.2/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lpthread -ldl -lirc_s
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
checking how to run the C preprocessor... /opt/intel/16.0/bin/intel64/icc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking size of long... 8
checking how to get the version output from /opt/intel/16.0/bin/intel64/ifort... -V
configure: creating ./config.status
config.status: creating Makefile.conf
config.status: creating config.h
Please check the Makefile.conf
Have a nice day!
[ 61%] Performing copy_mpi_serial_files step for 'mct_project'
[ 62%] Performing copy_makefiles step for 'mct_project'
[ 62%] Performing build step for 'mct_project'
/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/mpi.c(302): warning #266: function "MPI_Get_library_version" declared implicitly
    MPI_Get_library_version(version,resultlen);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/mpi.c(329): warning #266: function "MPI_Get_Version" declared implicitly
    MPI_Get_Version(mpi_vers, mpi_subvers);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/pack.c(43): warning #266: function "Type_extent" declared implicitly
    Type_extent(type, &extent);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/pack.c(73): warning #266: function "Pack_size" declared implicitly
    ret = Pack_size(incount, type_ptr, comm_ptr, size);
          ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/pack.c(127): warning #266: function "Type_extent" declared implicitly
    Type_extent(type, &extent);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(217): warning #266: function "Type_struct" declared implicitly
    return Type_struct(count, blocklens, displacements,
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(297): warning #266: function "Type_extent" declared implicitly
          Type_extent((Datatype) oldtypes_ptr[i], &extent);
          ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(310): warning #266: function "Copy_type" declared implicitly
            Copy_type( (typepair*) oldtypes_ptr[i]->pairs+k,
            ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(374): warning #266: function "Type_contiguous" declared implicitly
    return Type_contiguous(count, old_ptr, new_ptr);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(387): warning #266: function "Type_extent" declared implicitly
    Type_extent(oldtype, &extent);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(416): warning #266: function "Type_vector" declared implicitly
    return Type_vector(count, blocklen, stride, old_ptr, new_ptr);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(426): warning #266: function "Type_extent" declared implicitly
    Type_extent(oldtype, &extent);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(429): warning #266: function "Type_hvector" declared implicitly
    return Type_hvector(count, blocklen, bstride, oldtype, newtype);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(448): warning #266: function "Type_hvector" declared implicitly
    return Type_hvector(count, blocklen, stride, old_ptr, new_ptr);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(465): warning #266: function "Type_hvector" declared implicitly
    return Type_hvector(count, blocklen, stride, old_ptr, new_ptr);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(478): warning #266: function "Type_extent" declared implicitly
    Type_extent(oldtype, &extent);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(506): warning #266: function "Type_indexed" declared implicitly
    return Type_indexed(count, blocklens, displacements, old_ptr, new_ptr);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(518): warning #266: function "Type_extent" declared implicitly
      Type_extent(oldtype, &extent);
      ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(522): warning #266: function "Type_hindexed" declared implicitly
    return Type_hindexed(count, blocklens, bdisps, oldtype, newtype);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(543): warning #266: function "Type_create_indexed_block" declared implicitly
    return Type_create_indexed_block(count, blocklen, displacements, old_ptr, new_ptr);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(575): warning #266: function "Type_hindexed" declared implicitly
    return Type_hindexed(count, blocklens, disps, old_ptr, new_ptr);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(608): warning #266: function "Copy_type" declared implicitly
      Copy_type((typepair*) oldtype->pairs + i,
      ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(632): warning #266: function "Type_size" declared implicitly
    return Type_size(type_ptr, size);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(657): warning #266: function "Type_lb" declared implicitly
    return Type_lb(type_ptr, lb);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(677): warning #266: function "Type_ub" declared implicitly
    return Type_ub(type_ptr, ub);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(691): warning #266: function "FGet_address" declared implicitly
    *ierr = FGet_address(loc, address);
            ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(697): warning #266: function "FGet_address" declared implicitly
    *ierr = FGet_address(loc, address);
            ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(708): warning #266: function "MPI_Get_address" declared implicitly
    return MPI_Get_address(loc, address);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/type.c(728): warning #266: function "Type_extent" declared implicitly
    return Type_extent(type_ptr, extent);
           ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/copy.c(67): warning #266: function "Type_extent" declared implicitly
    Type_extent(src_type, &src_extent);
    ^

/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mpi-serial/info.c(43): warning #266: function "MPI_Info_free" declared implicitly
    *ierror=MPI_Info_free(info);
            ^

mpi.o send.o recv.o collective.o req.o list.o handles.o comm.o error.o ic_merge.o group.o time.o pack.o type.o type_const.o copy.o op.o cart.o getcount.o probe.o info.o fort.o mpif.o
a - mpi.o
a - send.o
a - recv.o
a - collective.o
a - req.o
a - list.o
a - handles.o
a - comm.o
a - error.o
a - ic_merge.o
a - group.o
a - time.o
a - pack.o
a - type.o
a - type_const.o
a - copy.o
a - op.o
a - cart.o
a - getcount.o
a - probe.o
a - info.o
a - fort.o
a - mpif.o
/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mct/m_SpatialIntegralV.F90(716): remark #8291: Recommended relationship between field width 'W' and the number of fractional digits 'D' in this edit descriptor is 'W>=D+7'.
		 write(stderr,'(3a,i8,a,e10.6)') myname_, &
-----------------------------------------^
/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mct/m_SpatialIntegralV.F90(959): remark #8291: Recommended relationship between field width 'W' and the number of fractional digits 'D' in this edit descriptor is 'W>=D+7'.
		 write(stderr,'(3a,i8,a,e10.6)') myname_, &
-----------------------------------------^
/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mct/m_Rearranger.F90(1104): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mct/m_Rearranger.F90(1105): remark #5140: Unrecognized directive
!DIR$ PREFERVECTOR
------------------^
/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mct/m_Rearranger.F90(1116): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/src/externals/mct/mct/m_Rearranger.F90(1117): remark #5140: Unrecognized directive
!DIR$ PREFERVECTOR
------------------^
[ 62%] Performing install step for 'mct_project'
[ 63%] Completed 'mct_project'
[ 63%] Built target mct_project
make: *** [all] Error 2
==================================================
Running make for __command_line_test__/__command_line_test__.
==================================================
ERROR: Command: 'make -j 8' failed with error 'None' from dir '/home/bhillma/codes/e3sm/branches/brhillman/cime/add-unit-tests-sems/cime/unit_tests.8JBJqJuE/__command_line_test__/__command_line_test__'