From 14b92ab859ffa2a6d2183c1a32b70421494be8b6 Mon Sep 17 00:00:00 2001
From: Alejandra Escobar <ales@hl-codon-13-01.ebi.ac.uk>
Date: Thu, 23 May 2024 14:32:37 +0100
Subject: [PATCH] Remove gh actions - branch.yml CI action.

Our team doesn't need that.
---
 .github/workflows/branch.yml | 44 ------------------------------------
 .nf-core.yml                 |  2 +-
 2 files changed, 1 insertion(+), 45 deletions(-)
 delete mode 100644 .github/workflows/branch.yml

diff --git a/.github/workflows/branch.yml b/.github/workflows/branch.yml
deleted file mode 100644
index 0228046..0000000
--- a/.github/workflows/branch.yml
+++ /dev/null
@@ -1,44 +0,0 @@
-name: nf-core branch protection
-# This workflow is triggered on PRs to master branch on the repository
-# It fails when someone tries to make a PR against the nf-core `master` branch instead of `dev`
-on:
-  pull_request_target:
-    branches: [master]
-
-jobs:
-  test:
-    runs-on: ubuntu-latest
-    steps:
-      # PRs to the nf-core repo master branch are only ok if coming from the nf-core repo `dev` or any `patch` branches
-      - name: Check PRs
-        if: github.repository == 'ebi-metagenomics/shallowmapping'
-        run: |
-          { [[ ${{github.event.pull_request.head.repo.full_name }} == ebi-metagenomics/shallowmapping ]] && [[ $GITHUB_HEAD_REF == "dev" ]]; } || [[ $GITHUB_HEAD_REF == "patch" ]]
-
-      # If the above check failed, post a comment on the PR explaining the failure
-      # NOTE - this doesn't currently work if the PR is coming from a fork, due to limitations in GitHub actions secrets
-      - name: Post PR comment
-        if: failure()
-        uses: mshick/add-pr-comment@b8f338c590a895d50bcbfa6c5859251edc8952fc # v2
-        with:
-          message: |
-            ## This PR is against the `master` branch :x:
-
-            * Do not close this PR
-            * Click _Edit_ and change the `base` to `dev`
-            * This CI test will remain failed until you push a new commit
-
-            ---
-
-            Hi @${{ github.event.pull_request.user.login }},
-
-            It looks like this pull-request is has been made against the [${{github.event.pull_request.head.repo.full_name }}](https://github.com/${{github.event.pull_request.head.repo.full_name }}) `master` branch.
-            The `master` branch on nf-core repositories should always contain code from the latest release.
-            Because of this, PRs to `master` are only allowed if they come from the [${{github.event.pull_request.head.repo.full_name }}](https://github.com/${{github.event.pull_request.head.repo.full_name }}) `dev` branch.
-
-            You do not need to close this PR, you can change the target branch to `dev` by clicking the _"Edit"_ button at the top of this page.
-            Note that even after this, the test will continue to show as failing until you push a new commit.
-
-            Thanks again for your contribution!
-          repo-token: ${{ secrets.GITHUB_TOKEN }}
-          allow-repeats: false
diff --git a/.nf-core.yml b/.nf-core.yml
index f455298..bde5d45 100644
--- a/.nf-core.yml
+++ b/.nf-core.yml
@@ -5,7 +5,6 @@ lint:
     - docs/
     - docs/output.md
     - docs/README.md
-    - docs/README.md
     - docs/usage.md
     - docs/images/nf-core-shallowmapping_logo_dark.png
     - docs/images/nf-core-shallowmapping_logo_light.png
@@ -13,6 +12,7 @@ lint:
     - .gitignore
     - .github/ISSUE_TEMPLATE/config.yml
     - .github/workflows/*
+    - .github/workflows/branch.yml
     - .github/CONTRIBUTING.md
     - .github/PULL_REQUEST_TEMPLATE.md
     - conf/igenomes.config