You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hello. I encountered a problem when running Quick Start molecule classifier code. My related versions are torch==2.2.2+cu118, torch-cluster==1.6.3+pt22cu118, torch-scatter==2.1.2+pt22cu118, torchdrug==0.2.1. CUDA is installed with version 11.8.
The error is:
`Traceback (most recent call last):
File "D:\PyCodes\tdrug\torchdrug_test.py", line 16, in
solver.train(num_epoch=100)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\core\engine.py", line 161, in train
loss, metric = model(batch)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1511, in _wrapped_call_impl
return self._call_impl(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1520, in _call_impl
return forward_call(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\tasks\property_prediction.py", line 102, in forward
pred = self.predict(batch, all_loss, metric)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\tasks\property_prediction.py", line 140, in predict
output = self.model(graph, graph.node_feature.float(), all_loss=all_loss, metric=metric)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1511, in _wrapped_call_impl
return self._call_impl(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1520, in _call_impl
return forward_call(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\models\gin.py", line 76, in forward
hidden = layer(graph, layer_input)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1511, in _wrapped_call_impl
return self._call_impl(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1520, in _call_impl
return forward_call(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\layers\conv.py", line 91, in forward
update = self.message_and_aggregate(graph, input)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\layers\conv.py", line 337, in message_and_aggregate
adjacency = utils.sparse_coo_tensor(graph.edge_list.t()[:2], graph.edge_weight,
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\torch.py", line 185, in sparse_coo_tensor
return torch_ext.sparse_coo_tensor_unsafe(indices, values, size)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\torch.py", line 26, in getattr
return getattr(self.module, key)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\decorator.py", line 102, in get
result = self.func(obj)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\torch.py", line 30, in module
return cpp_extension.load(self.name, self.sources, self.extra_cflags, self.extra_cuda_cflags,
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 1306, in load
return _jit_compile(
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 1710, in _jit_compile
_write_ninja_file_and_build_library(
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 1823, in _write_ninja_file_and_build_library
_run_ninja_build(
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 2112, in _run_ninja_build
raise RuntimeError(message) from e
RuntimeError: Error building extension 'torch_ext': [1/1] "D:\Tools\MicrosoftVS\Crap\2019\Community\VC\Tools\MSVC\14.29.30133\bin\Hostx64\x64/link.exe" torch_ext.o /nologo /DLL c10.lib torch_cpu.lib torch.lib /LIBPATH:D:\PyCodes\tdrug\venv\lib\site-packages\torch\lib torch_python.lib /LIBPATH:D:\PyCodes\tdrug\venv\Scripts\libs /out:torch_ext.pyd
FAILED: torch_ext.pyd
"D:\Tools\MicrosoftVS\Crap\2019\Community\VC\Tools\MSVC\14.29.30133\bin\Hostx64\x64/link.exe" torch_ext.o /nologo /DLL c10.lib torch_cpu.lib torch.lib /LIBPATH:D:\PyCodes\tdrug\venv\lib\site-packages\torch\lib torch_python.lib /LIBPATH:D:\PyCodes\tdrug\venv\Scripts\libs /out:torch_ext.pyd
ninja: build stopped: subcommand failed.`
I don't know what the cause of this problem is. Anyone's assistance is appreciated!
The text was updated successfully, but these errors were encountered:
Hello. I encountered a problem when running Quick Start molecule classifier code. My related versions are torch==2.2.2+cu118, torch-cluster==1.6.3+pt22cu118, torch-scatter==2.1.2+pt22cu118, torchdrug==0.2.1. CUDA is installed with version 11.8.
The error is:
`Traceback (most recent call last):
File "D:\PyCodes\tdrug\torchdrug_test.py", line 16, in
solver.train(num_epoch=100)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\core\engine.py", line 161, in train
loss, metric = model(batch)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1511, in _wrapped_call_impl
return self._call_impl(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1520, in _call_impl
return forward_call(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\tasks\property_prediction.py", line 102, in forward
pred = self.predict(batch, all_loss, metric)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\tasks\property_prediction.py", line 140, in predict
output = self.model(graph, graph.node_feature.float(), all_loss=all_loss, metric=metric)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1511, in _wrapped_call_impl
return self._call_impl(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1520, in _call_impl
return forward_call(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\models\gin.py", line 76, in forward
hidden = layer(graph, layer_input)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1511, in _wrapped_call_impl
return self._call_impl(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\nn\modules\module.py", line 1520, in _call_impl
return forward_call(*args, **kwargs)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\layers\conv.py", line 91, in forward
update = self.message_and_aggregate(graph, input)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\layers\conv.py", line 337, in message_and_aggregate
adjacency = utils.sparse_coo_tensor(graph.edge_list.t()[:2], graph.edge_weight,
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\torch.py", line 185, in sparse_coo_tensor
return torch_ext.sparse_coo_tensor_unsafe(indices, values, size)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\torch.py", line 26, in getattr
return getattr(self.module, key)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\decorator.py", line 102, in get
result = self.func(obj)
File "D:\PyCodes\tdrug\venv\lib\site-packages\torchdrug\utils\torch.py", line 30, in module
return cpp_extension.load(self.name, self.sources, self.extra_cflags, self.extra_cuda_cflags,
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 1306, in load
return _jit_compile(
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 1710, in _jit_compile
_write_ninja_file_and_build_library(
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 1823, in _write_ninja_file_and_build_library
_run_ninja_build(
File "D:\PyCodes\tdrug\venv\lib\site-packages\torch\utils\cpp_extension.py", line 2112, in _run_ninja_build
raise RuntimeError(message) from e
RuntimeError: Error building extension 'torch_ext': [1/1] "D:\Tools\MicrosoftVS\Crap\2019\Community\VC\Tools\MSVC\14.29.30133\bin\Hostx64\x64/link.exe" torch_ext.o /nologo /DLL c10.lib torch_cpu.lib torch.lib /LIBPATH:D:\PyCodes\tdrug\venv\lib\site-packages\torch\lib torch_python.lib /LIBPATH:D:\PyCodes\tdrug\venv\Scripts\libs /out:torch_ext.pyd
FAILED: torch_ext.pyd
"D:\Tools\MicrosoftVS\Crap\2019\Community\VC\Tools\MSVC\14.29.30133\bin\Hostx64\x64/link.exe" torch_ext.o /nologo /DLL c10.lib torch_cpu.lib torch.lib /LIBPATH:D:\PyCodes\tdrug\venv\lib\site-packages\torch\lib torch_python.lib /LIBPATH:D:\PyCodes\tdrug\venv\Scripts\libs /out:torch_ext.pyd
ninja: build stopped: subcommand failed.`
I don't know what the cause of this problem is. Anyone's assistance is appreciated!
The text was updated successfully, but these errors were encountered: