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Ontologies.md

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Ontologies

The following is a list of the ontologies and vocabularies currently referenced in the Terra Interoperability Model.

prefix Name Domain Link PURL/OWL
CL Cell ontology Cell types https://www.ebi.ac.uk/ols/ontologies/cl http://purl.obolibrary.org/obo/cl.owl
dcat Data Catalog Datasets, Catalogs https://bioportal.bioontology.org/ontologies/DCAT http://www.w3.org/ns/dcat/
dcterms Dublin Core Terms Standard https://www.dublincore.org/specifications/dublin-core/dcmi-terms/ http://purl.org/dc/terms/1.1/
DUO Data Use Ontology Data use codes http://www.ebi.ac.uk/ols/ontologies/duo http://purl.obolibrary.org/obo/duo.owl
efo Experimental Factor Ontology Assays http://bioportal.bioontology.org/ontologies/EFO http://purl.bioontology.org/ontology/EFO
IAO Information Artifact Ontology information entities https://bioportal.bioontology.org/ontologies/IAO http://purl.obolibrary.org/obo/
mondo Monarch Disease Ontology Disease https://monarchinitiative.org/disease http://purl.obolibrary.org/obo/mondo.owl
OBI Ontology for Biomedical Investigations Assays http://obi-ontology.org/ http://purl.obolibrary.org/obo/obi.owl
owl Web Ontology Language Standard https://www.w3.org/OWL/ http://www.w3.org/2002/07/owl#
prov Provenance Ontology Provenance, activities http://www.w3.org/TR/prov-o/ http://www.w3.org/ns/prov#
rdf Resource Description Framework Standard https://lov.linkeddata.es/dataset/lov/vocabs/rdf http://www.w3.org/2002/07/owl#
rdfs Resource Description Framework Schema Standard https://lov.linkeddata.es/dataset/lov/vocabs/rdfs http://www.w3.org/2000/01/rdf-schema#
skos Simple Knowledge Organization System Standard https://www.w3.org/2009/08/skos-reference/skos.html http://www.w3.org/2004/02/skos/core#
taxon Organism classification Organism http://bioportal.bioontology.org/ontologies/NCBITAXON http://purl.bioontology.org/ontology/NCBITAXON/
uberon Uber Anatomy Ontology Anatomy https://www.ebi.ac.uk/ols/ontologies/uberon http://purl.obolibrary.org/obo/uberon.owl