ModelImmuneCells.def

DESCRIPTION
"Immune Cells "

PREDICTOR
t               T   h         time	0 28

COMPARTMENTS

STATES
Naive           C   "number" "number"
EarlyEffector   C   "number" "number"
LateEffector    C   "number" "number"
Memory          C   "number" "number"
Pathogen        C   "number" "number"
 
INPUTS

REACTIONS
Naive           ->                  CUSTOM "mu_N*Naive"
Naive           ->  EarlyEffector   CUSTOM "delta_NE*Pathogen*Naive"
                ->  EarlyEffector   CUSTOM "rho_E*Pathogen*EarlyEffector"
EarlyEffector   ->                  CUSTOM "mu_EE*EarlyEffector*EarlyEffector"
EarlyEffector   ->  LateEffector    CUSTOM "delta_EL*EarlyEffector"
LateEffector    ->                  CUSTOM "mu_LL*LateEffector*LateEffector"
LateEffector    ->                  CUSTOM "mu_LE*EarlyEffector*LateEffector"
LateEffector    ->  Memory          CUSTOM "delta_LM*LateEffector"
                ->  Pathogen        CUSTOM "rho_P*Pathogen*Pathogen"
Pathogen        ->                  CUSTOM "mu_PE*EarlyEffector*Pathogen"
Pathogen        ->                  CUSTOM "mu_PL*LateEffector*Pathogen"
Pathogen        ->                  CUSTOM "mu_P*Pathogen"
       
DERIVED

OBSERVABLES
Naive_obs           C   "number" "number" 0 0 "Naive"
EarlyEffector_obs   C   "number" "number" 0 0 "EarlyEffector"
LateEffector_obs    C   "number" "number" 0 0 "LateEffector"
Memory_obs          C   "number" "number" 0 0 "Memory"

ERRORS
Naive_obs           "1"
EarlyEffector_obs   "1"
LateEffector_obs    "1"
Memory_obs          "1"

CONDITIONS
init_Naive           "8090"
init_EarlyEffector   "0"
init_LateEffector    "0"
init_Memory          "0"
init_Pathogen        "1"