snakefile_merge

rule all:
	input:
		lp = "Ke_CLEWs_merged/ke_mgd.lp"  

rule lp:
	input:
		input_datafile = "Ke_CLEWs_merged/data_mgd_pp.txt",
		input_model = "model/osemosys_short_pp.txt"
	output:
		out_lp = "Ke_CLEWs_merged/ke_mgd.lp"
	shell:
		"glpsol -m {input.input_model} -d {input.input_datafile} --wlp {output.out_lp} --check"

rule data_pp:
	input:
		input_datafile = "Ke_CLEWs_merged/data_mgd.txt",
		script = "scr/preprocess_data.py"
	output:
		out_datafile = "Ke_CLEWs_merged/data_mgd_pp.txt"
	shell:
		"python {input.script} otoole {input.input_datafile} {output.out_datafile}"

rule datafile:
	input:
 		input_yaml = "Ke_CLEWs_merged/config.yaml",
		input_result = "Ke_CLEWs_merged/csv/TECHNOLOGY.csv"
	params:
		input_dir = "Ke_CLEWs_merged/csv"
	output:
 		out_datafile = "Ke_CLEWs_merged/data_mgd.txt"
	shell:
 		"otoole convert csv datafile {params.input_dir} {output.out_datafile} {input.input_yaml}"

rule merge:
	input:
		config_file = "Ke_CLEWs_merged/config.yaml",
		script = "scr/read_clean_WESM.py"
	params:
		out_dir = "Ke_CLEWs_merged/csv",
	output:
		technology = "Ke_CLEWs_merged/csv/TECHNOLOGY.csv"

	shell:
		"""
		python {input.script} {params.out_dir} {input.config_file}
		"""