From 0c941bb8341d89875fb5dbf043df36175bb35183 Mon Sep 17 00:00:00 2001 From: Charles Kawczynski Date: Tue, 13 Feb 2024 14:37:26 -0500 Subject: [PATCH] Update manifests --- benchmarks/bickleyjet/Manifest.toml | 4 +- docs/Manifest.toml | 26 +- examples/Manifest.toml | 18 +- lib/ClimaCoreMakie/examples/Manifest.toml | 609 ++++++++++++++++------ perf/Manifest.toml | 18 +- 5 files changed, 473 insertions(+), 202 deletions(-) diff --git a/benchmarks/bickleyjet/Manifest.toml b/benchmarks/bickleyjet/Manifest.toml index ce229c17b0..9ebb4b389c 100644 --- a/benchmarks/bickleyjet/Manifest.toml +++ b/benchmarks/bickleyjet/Manifest.toml @@ -1028,9 +1028,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "2bd309f5171a628efdf5309361cd8a779b9e63a9" +git-tree-sha1 = "09c906ce9fa905d40e0706cdb62422422091c22f" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.8.0" +version = "3.8.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 7285749baa..1ad0bdc717 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -294,31 +294,31 @@ weakdeps = ["Krylov"] deps = ["ClimaCore", "Makie"] path = "../lib/ClimaCoreMakie" uuid = "908f55d8-4145-4867-9c14-5dad1a479e4d" -version = "0.4.2" +version = "0.4.3" [[deps.ClimaCorePlots]] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] path = "../lib/ClimaCorePlots" uuid = "cf7c7e5a-b407-4c48-9047-11a94a308626" -version = "0.2.6" +version = "0.2.7" [[deps.ClimaCoreSpectra]] deps = ["ClimaCore", "FFTW"] path = "../lib/ClimaCoreSpectra" uuid = "c2caaa1d-32ae-4754-ba0d-80e7561362e9" -version = "0.1.1" +version = "0.1.2" [[deps.ClimaCoreTempestRemap]] deps = ["ClimaComms", "ClimaCore", "CommonDataModel", "Dates", "LinearAlgebra", "NCDatasets", "PkgVersion", "TempestRemap_jll"] path = "../lib/ClimaCoreTempestRemap" uuid = "d934ef94-cdd4-4710-83d6-720549644b70" -version = "0.3.12" +version = "0.3.13" [[deps.ClimaCoreVTK]] deps = ["ClimaCore", "WriteVTK"] path = "../lib/ClimaCoreVTK" uuid = "c8b6d40d-e815-466f-95ae-c48aefa668fa" -version = "0.7.3" +version = "0.7.4" [[deps.CloseOpenIntervals]] deps = ["Static", "StaticArrayInterface"] @@ -493,9 +493,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "fefc2eeabecb745f1b1e1f91634381f7c81bd75d" +git-tree-sha1 = "eaf775818162923a0d509b10ca9ef809adfb43e8" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.146.1" +version = "6.146.2" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -1410,9 +1410,9 @@ version = "0.2.7" [[deps.LinearSolve]] deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "546cd2e37feca6d761ee45c0485c73f85b606369" +git-tree-sha1 = "2d2f8df932b302ef87402c104e10be03fcf6bacc" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.23.1" +version = "2.23.2" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" @@ -2114,9 +2114,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "2bd309f5171a628efdf5309361cd8a779b9e63a9" +git-tree-sha1 = "09c906ce9fa905d40e0706cdb62422422091c22f" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.8.0" +version = "3.8.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -2406,9 +2406,9 @@ weakdeps = ["ChainRulesCore"] [[deps.StableHashTraits]] deps = ["Compat", "PikaParser", "SHA", "Tables", "TupleTools"] -git-tree-sha1 = "662f56ffe22b3985f3be7474f0aecbaf214ecf0f" +git-tree-sha1 = "60c334d923094a5fa4c2f65899b212261d429323" uuid = "c5dd0088-6c3f-4803-b00e-f31a60c170fa" -version = "1.1.6" +version = "1.1.7" [[deps.StackViews]] deps = ["OffsetArrays"] diff --git a/examples/Manifest.toml b/examples/Manifest.toml index 0e60f6fb6f..7cdddcf6c6 100644 --- a/examples/Manifest.toml +++ b/examples/Manifest.toml @@ -267,19 +267,19 @@ weakdeps = ["Krylov"] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] path = "../lib/ClimaCorePlots" uuid = "cf7c7e5a-b407-4c48-9047-11a94a308626" -version = "0.2.6" +version = "0.2.7" [[deps.ClimaCoreTempestRemap]] deps = ["ClimaComms", "ClimaCore", "CommonDataModel", "Dates", "LinearAlgebra", "NCDatasets", "PkgVersion", "TempestRemap_jll"] path = "../lib/ClimaCoreTempestRemap" uuid = "d934ef94-cdd4-4710-83d6-720549644b70" -version = "0.3.12" +version = "0.3.13" [[deps.ClimaCoreVTK]] deps = ["ClimaCore", "WriteVTK"] path = "../lib/ClimaCoreVTK" uuid = "c8b6d40d-e815-466f-95ae-c48aefa668fa" -version = "0.7.3" +version = "0.7.4" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -451,9 +451,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "fefc2eeabecb745f1b1e1f91634381f7c81bd75d" +git-tree-sha1 = "eaf775818162923a0d509b10ca9ef809adfb43e8" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.146.1" +version = "6.146.2" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -1180,9 +1180,9 @@ weakdeps = ["ChainRulesCore"] [[deps.LinearSolve]] deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "546cd2e37feca6d761ee45c0485c73f85b606369" +git-tree-sha1 = "2d2f8df932b302ef87402c104e10be03fcf6bacc" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.23.1" +version = "2.23.2" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" @@ -1695,9 +1695,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "2bd309f5171a628efdf5309361cd8a779b9e63a9" +git-tree-sha1 = "09c906ce9fa905d40e0706cdb62422422091c22f" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.8.0" +version = "3.8.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" diff --git a/lib/ClimaCoreMakie/examples/Manifest.toml b/lib/ClimaCoreMakie/examples/Manifest.toml index 823036f73b..92f338b0c5 100644 --- a/lib/ClimaCoreMakie/examples/Manifest.toml +++ b/lib/ClimaCoreMakie/examples/Manifest.toml @@ -15,6 +15,11 @@ weakdeps = ["ChainRulesCore", "Test"] AbstractFFTsChainRulesCoreExt = "ChainRulesCore" AbstractFFTsTestExt = "Test" +[[deps.AbstractLattices]] +git-tree-sha1 = "222ee9e50b98f51b5d78feb93dd928880df35f06" +uuid = "398f06c4-4d28-53ec-89ca-5b2656b7603d" +version = "0.3.0" + [[deps.AbstractTrees]] git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" @@ -22,9 +27,9 @@ version = "0.4.4" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cde29ddf7e5726c9fb511f340244ea3481267608" +git-tree-sha1 = "0fb305e0253fd4e833d486914367a2ee2c2e78d0" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.7.2" +version = "4.0.1" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -64,9 +69,9 @@ version = "7.7.0" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "a45ec4acc9d905f94b47243cff666820bb107789" +git-tree-sha1 = "64d582bcb9c93ac741234789eeb4f16812413efb" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.5.2" +version = "1.6.0" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -107,9 +112,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "27baf04c642465b4289179f29bb7127f0673d4f1" +git-tree-sha1 = "931f3f49902e9b6b527fd7cd02d1cd7b4a84264c" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.4.0" +version = "1.5.0" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -118,12 +123,29 @@ weakdeps = ["SparseArrays"] [[deps.Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" +[[deps.BenchmarkTools]] +deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] +git-tree-sha1 = "f1f03a9fa24271160ed7e73051fba3c1a759b53f" +uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" +version = "1.4.0" + +[[deps.BitFlags]] +git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" +uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" +version = "0.1.8" + [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] git-tree-sha1 = "fc69cbdb4277042f72c6e59cbc7024fbe3034b89" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" version = "0.16.39" +[[deps.Bonito]] +deps = ["Base64", "CodecZlib", "Colors", "Dates", "Deno_jll", "HTTP", "Hyperscript", "LinearAlgebra", "Markdown", "MsgPack", "Observables", "RelocatableFolders", "SHA", "Sockets", "Tables", "ThreadPools", "URIs", "UUIDs", "WidgetsBase"] +git-tree-sha1 = "eb7ffbde27b8f321aaac74891dcddcd5676eeae9" +uuid = "824d6782-a2ef-11e9-3a09-e5662e0c26f8" +version = "3.0.4" + [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd" @@ -135,11 +157,26 @@ git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" version = "0.4.2" +[[deps.CRC32c]] +uuid = "8bf52ea8-c179-5cab-976a-9e18b702a9bc" + +[[deps.CRlibm]] +deps = ["CRlibm_jll"] +git-tree-sha1 = "32abd86e3c2025db5172aa182b982debed519834" +uuid = "96374032-68de-5a5b-8d9e-752f78720389" +version = "1.0.1" + +[[deps.CRlibm_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "e329286945d0cfc04456972ea732551869af1cfc" +uuid = "4e9b3aee-d8a1-5a3d-ad8b-7d824db253f0" +version = "1.0.1+0" + [[deps.CUDA]] -deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "Statistics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "95ac638373ac40e29c1b6d086a3698f5026ff6a6" +deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "StaticArrays", "Statistics"] +git-tree-sha1 = "baa8ea7a1ea63316fa3feb454635215773c9c845" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.1.2" +version = "5.2.0" weakdeps = ["ChainRulesCore", "SpecialFunctions"] [deps.CUDA.extensions] @@ -154,15 +191,15 @@ version = "0.7.0+1" [[deps.CUDA_Runtime_Discovery]] deps = ["Libdl"] -git-tree-sha1 = "bcc4a23cbbd99c8535a5318455dcf0f2546ec536" +git-tree-sha1 = "2cb12f6b2209f40a4b8967697689a47c50485490" uuid = "1af6417a-86b4-443c-805f-a4643ffb695f" -version = "0.2.2" +version = "0.2.3" [[deps.CUDA_Runtime_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "9704e50c9158cf8896c2776b8dbc5edd136caf80" +git-tree-sha1 = "8e25c009d2bf16c2c31a70a6e9e8939f7325cc84" uuid = "76a88914-d11a-5bdc-97e0-2f5a05c973a2" -version = "0.10.1+0" +version = "0.11.1+0" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -178,9 +215,9 @@ version = "0.5.1" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "c1deebd76f7a443d527fc0430d5758b8b2112ed8" +git-tree-sha1 = "ad25e7d21ce10e01de973cdc68ad0f850a953c52" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.19.1" +version = "1.21.1" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -196,7 +233,7 @@ version = "0.5.6" deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled"] path = "../../.." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.11.9" +version = "0.12.0" [deps.ClimaCore.extensions] KrylovExt = "Krylov" @@ -208,13 +245,19 @@ version = "0.11.9" deps = ["ClimaCore", "Makie"] path = ".." uuid = "908f55d8-4145-4867-9c14-5dad1a479e4d" -version = "0.4.2" +version = "0.4.3" + +[[deps.CodecBzip2]] +deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] +git-tree-sha1 = "9b1ca1aa6ce3f71b3d1840c538a8210a043625eb" +uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" +version = "0.8.2" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "cd67fc487743b2f0fd4380d4cbd3a24660d0eec8" +git-tree-sha1 = "59939d8a997469ee05c4b4944560a820f9ba0d73" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.3" +version = "0.7.4" [[deps.ColorBrewer]] deps = ["Colors", "JSON", "Test"] @@ -250,6 +293,11 @@ git-tree-sha1 = "fc08e5930ee9a4e03f84bfb5211cb54e7769758a" uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" version = "0.12.10" +[[deps.Combinatorics]] +git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" +uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" +version = "1.0.2" + [[deps.CommonSubexpressions]] deps = ["MacroTools", "Test"] git-tree-sha1 = "7b8a93dba8af7e3b42fecabf646260105ac373f7" @@ -271,6 +319,12 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" version = "1.0.5+1" +[[deps.ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "9c4708e3ed2b799e6124b5673a712dda0b596a9b" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.3.1" + [[deps.Conda]] deps = ["Downloads", "JSON", "VersionParsing"] git-tree-sha1 = "51cab8e982c5b598eea9c8ceaced4b58d9dd37c9" @@ -306,14 +360,14 @@ version = "4.1.1" [[deps.CubedSphere]] deps = ["Elliptic", "FFTW", "Printf", "ProgressBars", "SpecialFunctions", "TaylorSeries", "Test"] -git-tree-sha1 = "253193dfb0384646936c5ff3230b27a20d91261e" +git-tree-sha1 = "10134667d7d3569b191a65801514271b8a93b292" uuid = "7445602f-e544-4518-8976-18f8e8ae6cdb" -version = "0.2.4" +version = "0.2.5" [[deps.DataAPI]] -git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" +git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.15.0" +version = "1.16.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "DataStructures", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrecompileTools", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -336,6 +390,18 @@ version = "1.0.0" deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" +[[deps.DelaunayTriangulation]] +deps = ["DataStructures", "EnumX", "ExactPredicates", "Random", "SimpleGraphs"] +git-tree-sha1 = "d4e9dc4c6106b8d44e40cd4faf8261a678552c7c" +uuid = "927a84f5-c5f4-47a5-9785-b46e178433df" +version = "0.8.12" + +[[deps.Deno_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "cd6756e833c377e0ce9cd63fb97689a255f12323" +uuid = "04572ae6-984a-583e-9378-9577a1c2574d" +version = "1.33.4+0" + [[deps.DiffResults]] deps = ["StaticArraysCore"] git-tree-sha1 = "782dd5f4561f5d267313f23853baaaa4c52ea621" @@ -396,6 +462,28 @@ git-tree-sha1 = "71c79e77221ab3a29918aaf6db4f217b89138608" uuid = "b305315f-e792-5b7a-8f41-49f472929428" version = "1.0.1" +[[deps.EnumX]] +git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237" +uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" +version = "1.0.4" + +[[deps.ErrorfreeArithmetic]] +git-tree-sha1 = "d6863c556f1142a061532e79f611aa46be201686" +uuid = "90fa49ef-747e-5e6f-a989-263ba693cf1a" +version = "0.5.2" + +[[deps.ExactPredicates]] +deps = ["IntervalArithmetic", "Random", "StaticArraysCore", "Test"] +git-tree-sha1 = "276e83bc8b21589b79303b9985c321024ffdf59c" +uuid = "429591f6-91af-11e9-00e2-59fbe8cec110" +version = "2.2.5" + +[[deps.ExceptionUnwrapping]] +deps = ["Test"] +git-tree-sha1 = "dcb08a0d93ec0b1cdc4af184b26b591e9695423a" +uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" +version = "0.1.10" + [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] git-tree-sha1 = "4558ab818dcceaab612d1bb8c19cee87eda2b83c" @@ -412,12 +500,6 @@ git-tree-sha1 = "2140cd04483da90b2da7f99b2add0750504fc39c" uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910" version = "0.1.2" -[[deps.FFMPEG]] -deps = ["FFMPEG_jll"] -git-tree-sha1 = "b57e3acbe22f8484b4b5ff66a7499717fe1a9cc8" -uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" -version = "0.4.1" - [[deps.FFMPEG_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] git-tree-sha1 = "466d45dc38e15794ec7d5d63ec03d776a9aff36e" @@ -426,9 +508,9 @@ version = "4.4.4+1" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "ec22cbbcd01cba8f41eecd7d44aac1f23ee985e3" +git-tree-sha1 = "4820348781ae578893311153d69049a93d05f39d" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.7.2" +version = "1.8.0" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -436,12 +518,30 @@ git-tree-sha1 = "c6033cc3892d0ef5bb9cd29b7f2f0331ea5184ea" uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" version = "3.3.10+0" +[[deps.FastRounding]] +deps = ["ErrorfreeArithmetic", "LinearAlgebra"] +git-tree-sha1 = "6344aa18f654196be82e62816935225b3b9abe44" +uuid = "fa42c844-2597-5d31-933b-ebd51ab2693f" +version = "0.3.1" + [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" version = "1.16.2" +[[deps.FilePaths]] +deps = ["FilePathsBase", "MacroTools", "Reexport", "Requires"] +git-tree-sha1 = "919d9412dbf53a2e6fe74af62a73ceed0bce0629" +uuid = "8fc22ac5-c921-52a6-82fd-178b2807b824" +version = "0.8.3" + +[[deps.FilePathsBase]] +deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] +git-tree-sha1 = "9f00e42f8d99fdde64d40c8ea5d14269a2e2c1aa" +uuid = "48062228-2e41-5def-b9a4-89aafe57970f" +version = "0.9.21" + [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" @@ -457,6 +557,22 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"] FillArraysSparseArraysExt = "SparseArrays" FillArraysStatisticsExt = "Statistics" +[[deps.FiniteDiff]] +deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays"] +git-tree-sha1 = "73d1214fec245096717847c62d389a5d2ac86504" +uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" +version = "2.22.0" + + [deps.FiniteDiff.extensions] + FiniteDiffBandedMatricesExt = "BandedMatrices" + FiniteDiffBlockBandedMatricesExt = "BlockBandedMatrices" + FiniteDiffStaticArraysExt = "StaticArrays" + + [deps.FiniteDiff.weakdeps] + BandedMatrices = "aae01518-5342-5314-be14-df237901396f" + BlockBandedMatrices = "ffab5731-97b5-5995-9138-79e8c1846df0" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" + [[deps.FixedPointNumbers]] deps = ["Statistics"] git-tree-sha1 = "335bfdceacc84c5cdf16aadc768aa5ddfc5383cc" @@ -526,22 +642,22 @@ uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" version = "3.3.9+0" [[deps.GLMakie]] -deps = ["ColorTypes", "Colors", "FileIO", "FixedPointNumbers", "FreeTypeAbstraction", "GLFW", "GeometryBasics", "LinearAlgebra", "Makie", "Markdown", "MeshIO", "ModernGL", "Observables", "Printf", "Serialization", "ShaderAbstractions", "SnoopPrecompile", "StaticArrays"] -git-tree-sha1 = "69508b8c0068b8d5f3f3085a998cb64993b90089" +deps = ["ColorTypes", "Colors", "FileIO", "FixedPointNumbers", "FreeTypeAbstraction", "GLFW", "GeometryBasics", "LinearAlgebra", "Makie", "Markdown", "MeshIO", "ModernGL", "Observables", "PrecompileTools", "Printf", "ShaderAbstractions", "StaticArrays"] +git-tree-sha1 = "31571f931b22f0ebb98cace13b74c0d4516c8c2b" uuid = "e9467ef8-e4e7-5192-8a1a-b1aee30e663a" -version = "0.8.0" +version = "0.9.8" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "85d7fb51afb3def5dcb85ad31c3707795c8bccc1" +git-tree-sha1 = "47e4686ec18a9620850bad110b79966132f14283" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "9.1.0" +version = "10.0.2" [[deps.GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" +git-tree-sha1 = "ec632f177c0d990e64d955ccc1b8c04c485a0950" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.5" +version = "0.1.6" [[deps.GPUCompiler]] deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] @@ -566,6 +682,12 @@ git-tree-sha1 = "d4f85701f569584f2cff7ba67a137d03f0cfb7d0" uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" version = "1.3.3" +[[deps.GeoInterfaceMakie]] +deps = ["GeoInterface", "GeometryBasics", "MakieCore"] +git-tree-sha1 = "c15f793d501789ffa1cd171103406573d00f71cc" +uuid = "0edc0954-3250-4c18-859d-ec71c1660c08" +version = "0.1.5" + [[deps.GeoInterfaceRecipes]] deps = ["GeoInterface", "RecipesBase"] git-tree-sha1 = "fb1156076f24f1dfee45b3feadb31d05730a49ac" @@ -573,22 +695,32 @@ uuid = "0329782f-3d07-4b52-b9f6-d3137cf03c7a" version = "1.0.2" [[deps.GeoJSON]] -deps = ["Extents", "GeoFormatTypes", "GeoInterface", "GeoInterfaceRecipes", "JSON3", "StructTypes", "Tables"] -git-tree-sha1 = "29bb9a35cac72ccbeb92e37dbfb2feedd5b5aecd" +deps = ["Extents", "GeoFormatTypes", "GeoInterface", "GeoInterfaceMakie", "GeoInterfaceRecipes", "JSON3", "StructTypes", "Tables"] +git-tree-sha1 = "5846df44b97b4af377fd057b3a2a393228081a3c" uuid = "61d90e0f-e114-555e-ac52-39dfb47a3ef9" -version = "0.7.3" +version = "0.8.0" +weakdeps = ["Makie"] + + [deps.GeoJSON.extensions] + GeoJSONMakieExt = "Makie" [[deps.GeoMakie]] -deps = ["Colors", "Downloads", "GeoInterface", "GeoJSON", "GeometryBasics", "ImageIO", "LinearAlgebra", "Makie", "Proj", "Reexport", "Statistics", "StructArrays"] -git-tree-sha1 = "06753d663f23fd344b70b972c98d2f4fe65252c5" +deps = ["Colors", "Downloads", "GeoInterface", "GeoJSON", "Geodesy", "GeometryBasics", "ImageIO", "LinearAlgebra", "Makie", "Proj", "Reexport", "Statistics", "StructArrays"] +git-tree-sha1 = "2036e8f732018eb0219325ece08389b086bfc600" uuid = "db073c08-6b98-4ee5-b6a4-5efafb3259c6" -version = "0.5.1" +version = "0.6.1" + +[[deps.Geodesy]] +deps = ["CoordinateTransformations", "Dates", "LinearAlgebra", "StaticArrays"] +git-tree-sha1 = "ed98a4429bf0a033ccc5e036120181dd52f06d31" +uuid = "0ef565a4-170c-5f04-8de2-149903a85f3d" +version = "1.1.0" [[deps.GeometryBasics]] deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "424a5a6ce7c5d97cca7bcc4eac551b97294c54af" +git-tree-sha1 = "5694b56ccf9d15addedc35e9a4ba9c317721b788" uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" -version = "0.4.9" +version = "0.4.10" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -615,9 +747,9 @@ version = "1.3.14+0" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] -git-tree-sha1 = "f57a64794b336d4990d90f80b147474b869b1bc4" +git-tree-sha1 = "af13a277efd8a6e716d79ef635d5342ccb75be61" uuid = "3955a311-db13-416c-9275-1d80ed98e5e9" -version = "0.9.2" +version = "0.10.0" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -636,15 +768,15 @@ weakdeps = ["MPI"] [[deps.HDF5_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] -git-tree-sha1 = "8156325170d6763b5494c072ac4754214db3e669" +git-tree-sha1 = "e4591176488495bf44d7456bd73179d87d5e6eab" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.14.3+0" +version = "1.14.3+1" [[deps.HTTP]] -deps = ["Base64", "Dates", "IniFile", "Logging", "MbedTLS", "NetworkOptions", "Sockets", "URIs"] -git-tree-sha1 = "0fa77022fe4b511826b39c894c90daf5fce3334a" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "abbbb9ec3afd783a7cbd82ef01dcd088ea051398" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.9.17" +version = "1.10.1" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -660,9 +792,9 @@ version = "0.3.23" [[deps.Hyperscript]] deps = ["Test"] -git-tree-sha1 = "8d511d5b81240fc8e6802386302675bdf47737b9" +git-tree-sha1 = "179267cfa5e712760cd43dcae385d7ea90cc25a4" uuid = "47d2ed2b-36de-50cf-bf87-49c2cf4b8b91" -version = "0.0.4" +version = "0.0.5" [[deps.IJulia]] deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Libdl", "Logging", "Markdown", "MbedTLS", "Pkg", "Printf", "REPL", "Random", "SoftGlobalScope", "Test", "UUIDs", "ZMQ"] @@ -688,10 +820,10 @@ uuid = "c817782e-172a-44cc-b673-b171935fbb9e" version = "0.1.7" [[deps.ImageCore]] -deps = ["AbstractFFTs", "ColorVectorSpace", "Colors", "FixedPointNumbers", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "PrecompileTools", "Reexport"] -git-tree-sha1 = "fc5d1d3443a124fde6e92d0260cd9e064eba69f8" +deps = ["ColorVectorSpace", "Colors", "FixedPointNumbers", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "PrecompileTools", "Reexport"] +git-tree-sha1 = "b2a7eaa169c13f5bcae8131a83bc30eff8f71be0" uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" -version = "0.10.1" +version = "0.10.2" [[deps.ImageIO]] deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] @@ -699,18 +831,6 @@ git-tree-sha1 = "bca20b2f5d00c4fbc192c3212da8fa79f4688009" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" version = "0.6.7" -[[deps.ImageMagick]] -deps = ["FileIO", "ImageCore", "ImageMagick_jll", "InteractiveUtils"] -git-tree-sha1 = "b0b765ff0b4c3ee20ce6740d843be8dfce48487c" -uuid = "6218d12a-5da1-5696-b52f-db25d2ecc6d1" -version = "1.3.0" - -[[deps.ImageMagick_jll]] -deps = ["JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pkg", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "1c0a2295cca535fabaf2029062912591e9b61987" -uuid = "c73af94c-d91f-53ed-93a7-00f77d67a9d7" -version = "6.9.10-12+3" - [[deps.ImageMetadata]] deps = ["AxisArrays", "ImageAxes", "ImageBase", "ImageCore"] git-tree-sha1 = "355e2b974f2e3212a75dfb60519de21361ad3cb7" @@ -733,17 +853,17 @@ git-tree-sha1 = "ea8031dea4aff6bd41f1df8f2fdfb25b33626381" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" version = "0.1.4" -[[deps.IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" - [[deps.InlineStrings]] deps = ["Parsers"] git-tree-sha1 = "9cc2baf75c6d09f9da536ddf58eb2f29dedaf461" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" version = "1.4.0" +[[deps.IntegerMathUtils]] +git-tree-sha1 = "b8ffb903da9f7b8cf695a8bead8e01814aa24b30" +uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" +version = "0.1.2" + [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] git-tree-sha1 = "5fdf2fe6724d8caabf43b557b84ce53f3b7e2f6b" @@ -766,14 +886,20 @@ version = "0.15.1" [deps.Interpolations.weakdeps] Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" +[[deps.IntervalArithmetic]] +deps = ["CRlibm", "FastRounding", "LinearAlgebra", "Markdown", "Random", "RecipesBase", "RoundingEmulator", "SetRounding", "StaticArrays"] +git-tree-sha1 = "5ab7744289be503d76a944784bac3f2df7b809af" +uuid = "d1acc4aa-44c8-5952-acd4-ba5d80a2a253" +version = "0.20.9" + [[deps.IntervalSets]] -deps = ["Dates", "Random"] -git-tree-sha1 = "3d8866c029dd6b16e69e0d4a939c4dfcb98fac47" +git-tree-sha1 = "581191b15bcb56a2aa257e9c160085d0f128a380" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.7.8" -weakdeps = ["Statistics"] +version = "0.7.9" +weakdeps = ["Random", "Statistics"] [deps.IntervalSets.extensions] + IntervalSetsRandomExt = "Random" IntervalSetsStatisticsExt = "Statistics" [[deps.InvertedIndices]] @@ -826,12 +952,6 @@ version = "1.14.0" [deps.JSON3.weakdeps] ArrowTypes = "31f734f8-188a-4ce0-8406-c8a06bd891cd" -[[deps.JSServe]] -deps = ["Base64", "CodecZlib", "Colors", "HTTP", "Hyperscript", "JSON3", "LinearAlgebra", "Markdown", "MsgPack", "Observables", "RelocatableFolders", "SHA", "Sockets", "Tables", "Test", "UUIDs", "WebSockets", "WidgetsBase"] -git-tree-sha1 = "4cd7c5f723cad3cbbdfb295215e45b15b6924a19" -uuid = "824d6782-a2ef-11e9-3a09-e5662e0c26f9" -version = "1.2.9" - [[deps.JpegTurbo]] deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] git-tree-sha1 = "fa6d0bcff8583bac20f1ffa708c3913ca605c611" @@ -870,9 +990,9 @@ version = "0.6.8" [[deps.KrylovKit]] deps = ["ChainRulesCore", "GPUArraysCore", "LinearAlgebra", "Printf"] -git-tree-sha1 = "1a5e1d9941c783b0119897d29f2eb665d876ecf3" +git-tree-sha1 = "5cebb47f472f086f7dd31fb8e738a8db728f1f84" uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" -version = "0.6.0" +version = "0.6.1" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -888,9 +1008,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "cb4619f7353fc62a1a22ffa3d7ed9791cfb47ad8" +git-tree-sha1 = "9e70165cca7459d25406367f0c55e517a9a7bfe7" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.4.2" +version = "6.5.0" weakdeps = ["BFloat16s"] [deps.LLVM.extensions] @@ -898,9 +1018,9 @@ weakdeps = ["BFloat16s"] [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "98eaee04d96d973e79c25d49167668c5c8fb50e2" +git-tree-sha1 = "114e3a48f13d4c18ddd7fd6a00107b4b96f60f9c" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.27+1" +version = "0.0.28+0" [[deps.LLVMLoopInfo]] git-tree-sha1 = "2e5c102cfc41f48ae4740c7eca7743cc7e7b75ea" @@ -997,10 +1117,10 @@ uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" version = "2.35.0+0" [[deps.Libtiff_jll]] -deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "3eb79b0ca5764d4799c06699573fd8f533259713" +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "6355fb9a4d22d867318db186fd09b09b35bd2ed7" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.4.0+0" +version = "4.6.0+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1008,10 +1128,28 @@ git-tree-sha1 = "7f3efec06033682db852f8b3bc3c1d2b0a0ab066" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" version = "2.36.0+0" +[[deps.LightXML]] +deps = ["Libdl", "XML2_jll"] +git-tree-sha1 = "3a994404d3f6709610701c7dabfc03fed87a81f8" +uuid = "9c8b4983-aa76-5018-a973-4c85ecc9e179" +version = "0.9.1" + +[[deps.LineSearches]] +deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] +git-tree-sha1 = "7bbea35cec17305fc70a0e5b4641477dc0789d9d" +uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" +version = "7.2.0" + [[deps.LinearAlgebra]] deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" +[[deps.LinearAlgebraX]] +deps = ["LinearAlgebra", "Mods", "Primes", "SimplePolynomials"] +git-tree-sha1 = "d76cec8007ec123c2b681269d40f94b053473fcf" +uuid = "9b3f67b0-2d00-526e-9884-9e4938f8fb88" +version = "0.2.7" + [[deps.LogExpFunctions]] deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "7d6dd4e9212aebaeed356de34ccf262a3cd415aa" @@ -1031,6 +1169,12 @@ version = "0.3.26" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" +[[deps.LoggingExtras]] +deps = ["Dates", "Logging"] +git-tree-sha1 = "c1dd6d7978c12545b4179fb6153b9250c96b0075" +uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" +version = "1.0.3" + [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl"] git-tree-sha1 = "72dc3cf284559eb8f53aa593fe62cb33f83ed0c0" @@ -1076,16 +1220,16 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.13" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "MiniQhull", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Setfield", "Showoff", "SignedDistanceFields", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] -git-tree-sha1 = "7154536d78dcde1c4321b50e0e8dda90995f1f6f" +deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalArithmetic", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] +git-tree-sha1 = "40c5dfbb99c91835171536cd571fe6f1ba18ff97" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.19.0" +version = "0.20.7" [[deps.MakieCore]] -deps = ["Observables"] -git-tree-sha1 = "5357b0696f7c245941389995e193c127190d45f8" +deps = ["Observables", "REPL"] +git-tree-sha1 = "248b7a4be0f92b497f7a331aed02c1e9a878f46b" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.6.0" +version = "0.7.3" [[deps.MappedArrays]] git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" @@ -1096,10 +1240,11 @@ version = "0.4.2" deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" -[[deps.Match]] -git-tree-sha1 = "1d9bc5c1a6e7ee24effb93f175c9342f9154d97f" -uuid = "7eb4fadd-790c-5f42-8a69-bfa0b872bfbf" -version = "1.2.0" +[[deps.MathOptInterface]] +deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] +git-tree-sha1 = "8b40681684df46785a0012d352982e22ac3be59e" +uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" +version = "1.25.2" [[deps.MathTeXEngine]] deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "UnicodeFun"] @@ -1120,9 +1265,9 @@ version = "2.28.2+1" [[deps.MeshIO]] deps = ["ColorTypes", "FileIO", "GeometryBasics", "Printf"] -git-tree-sha1 = "8be09d84a2d597c7c0c34d7d604c039c9763e48c" +git-tree-sha1 = "8c26ab950860dfca6767f2bbd90fdf1e8ddc678b" uuid = "7269a6da-0436-5bbc-96c2-40638cbb6118" -version = "0.4.10" +version = "0.4.11" [[deps.MicrosoftMPI_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1130,12 +1275,6 @@ git-tree-sha1 = "b01beb91d20b0d1312a9471a36017b5b339d26de" uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf" version = "10.1.4+1" -[[deps.MiniQhull]] -deps = ["QhullMiniWrapper_jll"] -git-tree-sha1 = "9dc837d180ee49eeb7c8b77bb1c860452634b0d1" -uuid = "978d7f02-9e05-4691-894f-ae31a51d76ca" -version = "0.4.0" - [[deps.Missings]] deps = ["DataAPI"] git-tree-sha1 = "f66bdc5de519e8f8ae43bdc598782d35a25b1272" @@ -1151,6 +1290,11 @@ git-tree-sha1 = "b76ea40b5c0f45790ae09492712dd326208c28b2" uuid = "66fc600b-dfda-50eb-8b99-91cfa97b1301" version = "1.1.7" +[[deps.Mods]] +git-tree-sha1 = "924f962b524a71eef7a21dae1e6853817f9b658f" +uuid = "7475f97c-0381-53b1-977b-4c60186c8d62" +version = "2.2.4" + [[deps.MosaicViews]] deps = ["MappedArrays", "OffsetArrays", "PaddedViews", "StackViews"] git-tree-sha1 = "7b86a5d4d70a9f5cdf2dacb3cbe6d251d1a61dbe" @@ -1167,6 +1311,23 @@ git-tree-sha1 = "f5db02ae992c260e4826fe78c942954b48e1d9c2" uuid = "99f44e22-a591-53d1-9472-aa23ef4bd671" version = "1.2.1" +[[deps.Multisets]] +git-tree-sha1 = "8d852646862c96e226367ad10c8af56099b4047e" +uuid = "3b2b4ff1-bcff-5658-a3ee-dbcf1ce5ac09" +version = "0.4.4" + +[[deps.MutableArithmetics]] +deps = ["LinearAlgebra", "SparseArrays", "Test"] +git-tree-sha1 = "806eea990fb41f9b36f1253e5697aa645bf6a9f8" +uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" +version = "1.4.0" + +[[deps.NLSolversBase]] +deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] +git-tree-sha1 = "a0b464d183da839699f4c79e7606d9d186ec172c" +uuid = "d41bc354-129a-5804-8e4c-c37616107c6c" +version = "7.8.3" + [[deps.NVTX]] deps = ["Colors", "JuliaNVTXCallbacks_jll", "Libdl", "NVTX_jll"] git-tree-sha1 = "53046f0483375e3ed78e49190f1154fa0a4083a1" @@ -1243,11 +1404,17 @@ git-tree-sha1 = "e25c1778a98e34219a00455d6e4384e017ea9762" uuid = "fe0851c0-eecd-5654-98d4-656369965a5c" version = "4.1.6+0" +[[deps.OpenSSL]] +deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" +uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" +version = "1.4.1" + [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "cc6e1927ac521b659af340e0ca45828a3ffc748f" +git-tree-sha1 = "60e3045590bd104a16fefb12836c00c0ef8c7f8c" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.0.12+0" +version = "3.0.13+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1255,6 +1422,12 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1" uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" version = "0.5.5+0" +[[deps.Optim]] +deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] +git-tree-sha1 = "d024bfb56144d947d4fafcd9cb5cafbe3410b133" +uuid = "429524aa-4258-5aef-a3af-852621145aeb" +version = "1.9.2" + [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "51a08fb14ec28da2ec7a927c4337e4332c2a4720" @@ -1284,16 +1457,16 @@ uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" version = "0.4.3" [[deps.PROJ_jll]] -deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "Libtiff_jll", "Pkg", "SQLite_jll"] -git-tree-sha1 = "fcb3f39ae1184a056ecc415863d46d2109aa6947" +deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "Libtiff_jll", "SQLite_jll"] +git-tree-sha1 = "f3e45027ea0f44a2725fbedfdb7ed118d5deec8d" uuid = "58948b4f-47e0-5654-a9ad-f609743f8632" -version = "900.100.0+0" +version = "901.300.0+0" [[deps.Packing]] deps = ["GeometryBasics"] -git-tree-sha1 = "1155f6f937fa2b94104162f01fa400e192e4272f" +git-tree-sha1 = "ec3edfe723df33528e085e632414499f26650501" uuid = "19eb6ba3-879d-56ad-ad62-d5c202156566" -version = "0.4.2" +version = "0.5.0" [[deps.PaddedViews]] deps = ["OffsetArrays"] @@ -1301,12 +1474,30 @@ git-tree-sha1 = "0fac6313486baae819364c52b4f483450a9d793f" uuid = "5432bcbf-9aad-5242-b902-cca2824c8663" version = "0.5.12" +[[deps.Parameters]] +deps = ["OrderedCollections", "UnPack"] +git-tree-sha1 = "34c0e9ad262e5f7fc75b10a9952ca7692cfc5fbe" +uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a" +version = "0.12.3" + [[deps.Parsers]] deps = ["Dates", "PrecompileTools", "UUIDs"] git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" version = "2.8.1" +[[deps.Permutations]] +deps = ["Combinatorics", "LinearAlgebra", "Random"] +git-tree-sha1 = "eb3f9df2457819bf0a9019bd93cc451697a0751e" +uuid = "2ae35dd2-176d-5d53-8349-f30d82d94d4f" +version = "0.4.20" + +[[deps.PikaParser]] +deps = ["DocStringExtensions"] +git-tree-sha1 = "d6ff87de27ff3082131f31a714d25ab6d0a88abf" +uuid = "3bbf5609-3e7b-44cd-8549-7c69f321e792" +version = "0.6.1" + [[deps.Pixman_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl"] git-tree-sha1 = "64779bc4c9784fee475689a1752ef4d5747c5e87" @@ -1335,12 +1526,31 @@ git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" uuid = "647866c9-e3ac-4575-94e7-e3d426903924" version = "0.1.2" +[[deps.Polynomials]] +deps = ["LinearAlgebra", "RecipesBase", "Setfield", "SparseArrays"] +git-tree-sha1 = "a9c7a523d5ed375be3983db190f6a5874ae9286d" +uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" +version = "4.0.6" +weakdeps = ["ChainRulesCore", "FFTW", "MakieCore", "MutableArithmetics"] + + [deps.Polynomials.extensions] + PolynomialsChainRulesCoreExt = "ChainRulesCore" + PolynomialsFFTWExt = "FFTW" + PolynomialsMakieCoreExt = "MakieCore" + PolynomialsMutableArithmeticsExt = "MutableArithmetics" + [[deps.PooledArrays]] deps = ["DataAPI", "Future"] git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.3" +[[deps.PositiveFactorizations]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20" +uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" +version = "0.2.4" + [[deps.PrecompileTools]] deps = ["Preferences"] git-tree-sha1 = "03b4c25b43cb84cee5c90aa9b5ea0a78fd848d2f" @@ -1359,10 +1569,20 @@ git-tree-sha1 = "88b895d13d53b5577fd53379d913b9ab9ac82660" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" version = "2.3.1" +[[deps.Primes]] +deps = ["IntegerMathUtils"] +git-tree-sha1 = "1d05623b5952aed1307bf8b43bec8b8d1ef94b6e" +uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" +version = "0.5.5" + [[deps.Printf]] deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" +[[deps.Profile]] +deps = ["Printf"] +uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" + [[deps.ProgressBars]] deps = ["Printf"] git-tree-sha1 = "b437cdb0385ed38312d91d9c00c20f3798b30256" @@ -1387,18 +1607,6 @@ git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" version = "1.0.0" -[[deps.QhullMiniWrapper_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Qhull_jll"] -git-tree-sha1 = "607cf73c03f8a9f83b36db0b86a3a9c14179621f" -uuid = "460c41e3-6112-5d7f-b78c-b6823adb3f2d" -version = "1.0.0+1" - -[[deps.Qhull_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "be2449911f4d6cfddacdf7efc895eceda3eee5c1" -uuid = "784f63db-0788-585a-bace-daefebcd302b" -version = "8.0.1003+0" - [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] git-tree-sha1 = "9b23c31e76e333e6fb4c1595ae6afa74966a729e" @@ -1448,21 +1656,25 @@ version = "1.3.4" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "dd7fc1923fde0cc6cdff451352d17924b0704ca1" +git-tree-sha1 = "09c906ce9fa905d40e0706cdb62422422091c22f" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.5.4" +version = "3.8.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" + RecursiveArrayToolsForwardDiffExt = "ForwardDiff" RecursiveArrayToolsMeasurementsExt = "Measurements" RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements" + RecursiveArrayToolsReverseDiffExt = ["ReverseDiff", "Zygote"] RecursiveArrayToolsTrackerExt = "Tracker" RecursiveArrayToolsZygoteExt = "Zygote" [deps.RecursiveArrayTools.weakdeps] FastBroadcast = "7034ab61-46d4-4ed7-9d0f-46aef9175898" + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" @@ -1483,6 +1695,12 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.3.0" +[[deps.RingLists]] +deps = ["Random"] +git-tree-sha1 = "f39da63aa6d2d88e0c1bd20ed6a3ff9ea7171ada" +uuid = "286e9d63-9694-5540-9e3c-4e6708fa07b2" +version = "0.2.8" + [[deps.Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b" @@ -1501,15 +1719,20 @@ git-tree-sha1 = "833d9914e748ca9329b762a82ec912897975f8d8" uuid = "7181ea78-2dcb-4de3-ab41-2b8ab5a31e74" version = "0.4.1" +[[deps.RoundingEmulator]] +git-tree-sha1 = "40b9edad2e5287e05bd413a38f61a8ff55b9557b" +uuid = "5eaf0fd0-dfba-4ccb-bf02-d820a40db705" +version = "0.2.1" + [[deps.SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" version = "0.7.0" [[deps.SQLite_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "81f7d934b52b2441f7b44520bd982fdb3607b0da" +git-tree-sha1 = "75e28667a36b5650b5cc4baa266c5760c3672275" uuid = "76ed43ae-9a5d-5a62-8c75-30186b810ce8" -version = "3.43.0+0" +version = "3.45.0+0" [[deps.Scratch]] deps = ["Dates"] @@ -1526,6 +1749,11 @@ version = "1.4.1" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" +[[deps.SetRounding]] +git-tree-sha1 = "d7a25e439d07a17b7cdf97eecee504c50fedf5f6" +uuid = "3cc68bcd-71a2-5612-b932-767ffbe40ab0" +version = "0.2.1" + [[deps.Setfield]] deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" @@ -1534,9 +1762,9 @@ version = "1.1.1" [[deps.ShaderAbstractions]] deps = ["ColorTypes", "FixedPointNumbers", "GeometryBasics", "LinearAlgebra", "Observables", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "6b5bba824b515ec026064d1e7f5d61432e954b71" +git-tree-sha1 = "79123bc60c5507f035e6d1d9e563bb2971954ec8" uuid = "65257c39-d410-5151-9873-9b3e5be5013e" -version = "0.2.9" +version = "0.4.1" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1554,6 +1782,35 @@ git-tree-sha1 = "d263a08ec505853a5ff1c1ebde2070419e3f28e9" uuid = "73760f76-fbc4-59ce-8f25-708e95d2df96" version = "0.4.0" +[[deps.SimpleBufferStream]] +git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" +version = "1.1.0" + +[[deps.SimpleGraphs]] +deps = ["AbstractLattices", "Combinatorics", "DataStructures", "IterTools", "LightXML", "LinearAlgebra", "LinearAlgebraX", "Optim", "Primes", "Random", "RingLists", "SimplePartitions", "SimplePolynomials", "SimpleRandom", "SparseArrays", "Statistics"] +git-tree-sha1 = "f65caa24a622f985cc341de81d3f9744435d0d0f" +uuid = "55797a34-41de-5266-9ec1-32ac4eb504d3" +version = "0.8.6" + +[[deps.SimplePartitions]] +deps = ["AbstractLattices", "DataStructures", "Permutations"] +git-tree-sha1 = "e9330391d04241eafdc358713b48396619c83bcb" +uuid = "ec83eff0-a5b5-5643-ae32-5cbf6eedec9d" +version = "0.3.1" + +[[deps.SimplePolynomials]] +deps = ["Mods", "Multisets", "Polynomials", "Primes"] +git-tree-sha1 = "7063828369cafa93f3187b3d0159f05582011405" +uuid = "cc47b68c-3164-5771-a705-2bc0097375a0" +version = "0.2.17" + +[[deps.SimpleRandom]] +deps = ["Distributions", "LinearAlgebra", "Random"] +git-tree-sha1 = "3a6fb395e37afab81aeea85bae48a4db5cd7244a" +uuid = "a6525b86-64cd-54fa-8f65-62fc48bdc0e8" +version = "0.3.1" + [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" @@ -1566,12 +1823,6 @@ git-tree-sha1 = "2da10356e31327c7096832eb9cd86307a50b1eb6" uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" version = "0.1.3" -[[deps.SnoopPrecompile]] -deps = ["Preferences"] -git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" -uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" -version = "1.0.3" - [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1602,6 +1853,12 @@ weakdeps = ["ChainRulesCore"] [deps.SpecialFunctions.extensions] SpecialFunctionsChainRulesCoreExt = "ChainRulesCore" +[[deps.StableHashTraits]] +deps = ["Compat", "PikaParser", "SHA", "Tables", "TupleTools"] +git-tree-sha1 = "60c334d923094a5fa4c2f65899b212261d429323" +uuid = "c5dd0088-6c3f-4803-b00e-f31a60c170fa" +version = "1.1.7" + [[deps.StackViews]] deps = ["OffsetArrays"] git-tree-sha1 = "46e589465204cd0c08b4bd97385e4fa79a0c770c" @@ -1610,15 +1867,15 @@ version = "0.1.1" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "f295e0a1da4ca425659c57441bcb59abb035a4bc" +git-tree-sha1 = "d2fdac9ff3906e27f7a618d47b676941baa6c80c" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.8.8" +version = "0.8.10" [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "f68dd04d131d9a8a8eb836173ee8f105c360b0c5" +git-tree-sha1 = "7b0e9c14c624e435076d19aea1e5cbdec2b9ca37" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.9.1" +version = "1.9.2" weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] @@ -1643,9 +1900,9 @@ version = "1.7.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "d1bf48bfcc554a3761a133fe3a9bb01488e06916" +git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.21" +version = "0.34.2" [[deps.StatsFuns]] deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] @@ -1669,9 +1926,9 @@ version = "0.3.4" [[deps.StructArrays]] deps = ["Adapt", "ConstructionBase", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"] -git-tree-sha1 = "0a3db38e4cce3c54fe7a71f831cd7b6194a54213" +git-tree-sha1 = "1b0b1205a56dc288b71b1961d48e351520702e24" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.16" +version = "0.6.17" [[deps.StructTypes]] deps = ["Dates", "UUIDs"] @@ -1689,9 +1946,9 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" version = "7.2.1+1" [[deps.SymbolicIndexingInterface]] -git-tree-sha1 = "74502f408d99fc217a9d7cd901d9ffe45af892b1" +git-tree-sha1 = "b3103f4f50a3843e66297a2456921377c78f5e31" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.3" +version = "0.3.5" [[deps.TOML]] deps = ["Dates"] @@ -1717,16 +1974,14 @@ version = "1.10.0" [[deps.TaylorSeries]] deps = ["LinearAlgebra", "Markdown", "Requires", "SparseArrays"] -git-tree-sha1 = "9138fdc8ee4e3b8839eca696a76d15e16c9c7af0" +git-tree-sha1 = "1c7170668366821b0c4c4fe03ee78f8d6cf36e2c" uuid = "6aa5eb33-94cf-58f4-a9d0-e4b2c4fc25ea" -version = "0.15.4" +version = "0.16.0" +weakdeps = ["IntervalArithmetic"] [deps.TaylorSeries.extensions] TaylorSeriesIAExt = "IntervalArithmetic" - [deps.TaylorSeries.weakdeps] - IntervalArithmetic = "d1acc4aa-44c8-5952-acd4-ba5d80a2a253" - [[deps.TensorCore]] deps = ["LinearAlgebra"] git-tree-sha1 = "1feb45f88d133a655e001435632f019a9a1bcdb6" @@ -1737,6 +1992,12 @@ version = "0.1.1" deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" +[[deps.ThreadPools]] +deps = ["Printf", "RecipesBase", "Statistics"] +git-tree-sha1 = "50cb5f85d5646bc1422aa0238aa5bfca99ca9ae7" +uuid = "b189fb0b-2eb5-4ed4-bc0c-d34c51242431" +version = "2.1.1" + [[deps.TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] git-tree-sha1 = "34cc045dd0aaa59b8bbe86c644679bc57f1d5bd0" @@ -1750,9 +2011,9 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.23" [[deps.TranscodingStreams]] -git-tree-sha1 = "1fbeaaca45801b4ba17c251dd8603ef24801dd84" +git-tree-sha1 = "54194d92959d8ebaa8e26227dbe3cdefcdcd594f" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.10.2" +version = "0.10.3" weakdeps = ["Random", "Test"] [deps.TranscodingStreams.extensions] @@ -1763,6 +2024,11 @@ git-tree-sha1 = "4d4ed7f294cda19382ff7de4c137d24d16adc89b" uuid = "981d1d27-644d-49a2-9326-4793e63143c3" version = "0.1.0" +[[deps.TupleTools]] +git-tree-sha1 = "41d61b1c545b06279871ef1a4b5fcb2cac2191cd" +uuid = "9d95972d-f1c8-5527-a6e0-b4b365fa01f6" +version = "1.5.0" + [[deps.URIs]] git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b" uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" @@ -1772,6 +2038,11 @@ version = "1.5.1" deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" +[[deps.UnPack]] +git-tree-sha1 = "387c1f73762231e86e0c9c5443ce3b4a0a9a0c2b" +uuid = "3a884ed6-31ef-47d7-9d2a-63182c4928ed" +version = "1.0.2" + [[deps.Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" @@ -1804,16 +2075,10 @@ uuid = "81def892-9a0e-5fdd-b105-ffc91e053289" version = "1.3.0" [[deps.WGLMakie]] -deps = ["Colors", "FileIO", "FreeTypeAbstraction", "GeometryBasics", "Hyperscript", "ImageMagick", "JSServe", "LinearAlgebra", "Makie", "Observables", "RelocatableFolders", "ShaderAbstractions", "SnoopPrecompile", "StaticArrays"] -git-tree-sha1 = "2285958a26f0f892f870420acddb53ce8530e195" +deps = ["Bonito", "Colors", "FileIO", "FreeTypeAbstraction", "GeometryBasics", "Hyperscript", "LinearAlgebra", "Makie", "Observables", "PNGFiles", "PrecompileTools", "RelocatableFolders", "ShaderAbstractions", "StaticArrays"] +git-tree-sha1 = "6cf78165dd5b10c0b8df85ff3f1f69e25580ad3b" uuid = "276b4fcb-3e11-5398-bf8b-a0c2d153d008" -version = "0.8.0" - -[[deps.WebSockets]] -deps = ["Base64", "Dates", "HTTP", "Logging", "Sockets"] -git-tree-sha1 = "f91a602e25fe6b89afc93cf02a4ae18ee9384ce3" -uuid = "104b5d7c-a370-577a-8038-80a2059c5097" -version = "1.5.9" +version = "0.9.7" [[deps.WidgetsBase]] deps = ["Observables"] @@ -1839,6 +2104,12 @@ git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" version = "1.1.34+0" +[[deps.XZ_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "522b8414d40c4cbbab8dee346ac3a09f9768f25d" +uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" +version = "5.4.5+0" + [[deps.Xorg_libX11_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] git-tree-sha1 = "afead5aba5aa507ad5a3bf01f58f82c8d1403495" diff --git a/perf/Manifest.toml b/perf/Manifest.toml index e6a1eafc4b..df6f96868e 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -227,19 +227,19 @@ weakdeps = ["Krylov"] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] path = "../lib/ClimaCorePlots" uuid = "cf7c7e5a-b407-4c48-9047-11a94a308626" -version = "0.2.6" +version = "0.2.7" [[deps.ClimaCoreTempestRemap]] deps = ["ClimaComms", "ClimaCore", "CommonDataModel", "Dates", "LinearAlgebra", "NCDatasets", "PkgVersion", "TempestRemap_jll"] path = "../lib/ClimaCoreTempestRemap" uuid = "d934ef94-cdd4-4710-83d6-720549644b70" -version = "0.3.12" +version = "0.3.13" [[deps.ClimaCoreVTK]] deps = ["ClimaCore", "WriteVTK"] path = "../lib/ClimaCoreVTK" uuid = "c8b6d40d-e815-466f-95ae-c48aefa668fa" -version = "0.7.3" +version = "0.7.4" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -420,9 +420,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "fefc2eeabecb745f1b1e1f91634381f7c81bd75d" +git-tree-sha1 = "eaf775818162923a0d509b10ca9ef809adfb43e8" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.146.1" +version = "6.146.2" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -1178,9 +1178,9 @@ weakdeps = ["ChainRulesCore"] [[deps.LinearSolve]] deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "546cd2e37feca6d761ee45c0485c73f85b606369" +git-tree-sha1 = "2d2f8df932b302ef87402c104e10be03fcf6bacc" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.23.1" +version = "2.23.2" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" @@ -1727,9 +1727,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "2bd309f5171a628efdf5309361cd8a779b9e63a9" +git-tree-sha1 = "09c906ce9fa905d40e0706cdb62422422091c22f" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.8.0" +version = "3.8.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast"