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While after re-rooting the tree on the outgroup (Wild_pig and Minke_whale), there is no support value between Yak and Cow. Why?
Also, I noticed that there's also no support value if there are more than 2 identical sequences. How to denote that in the phylogenetic tree display? How to distinguish the two kinds of blank in the figure annotation?
Yours,
Wei
The text was updated successfully, but these errors were encountered:
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Hi,
I followed the tutorial of Rooting phylogenetic trees (http://www.iqtree.org/doc/Rootstrap#inferring-unrooted-tree-with-outgroup) with the same data and code:
iqtree2 -s bovidae_outgroup.phy -p bovidae.nex -B 1000 -T AUTO -st NT2AA --prefix rev_aa_outg
While after re-rooting the tree on the outgroup (Wild_pig and Minke_whale), there is no support value between Yak and Cow. Why?
Also, I noticed that there's also no support value if there are more than 2 identical sequences. How to denote that in the phylogenetic tree display? How to distinguish the two kinds of blank in the figure annotation?
Yours,
Wei
The text was updated successfully, but these errors were encountered: