From 018a88e29c40a899328d86934fc2ae4289a71f96 Mon Sep 17 00:00:00 2001
From: AFg6K7h4fhy2 <127630341+AFg6K7h4fhy2@users.noreply.github.com>
Date: Thu, 29 Aug 2024 17:10:24 -0400
Subject: [PATCH] remove UTF-8 encoding headers

---
 pyrenew/convolve.py                                | 2 --
 pyrenew/deterministic/__init__.py                  | 2 --
 pyrenew/deterministic/deterministic.py             | 1 -
 pyrenew/deterministic/deterministicpmf.py          | 1 -
 pyrenew/distutil.py                                | 2 --
 pyrenew/latent/__init__.py                         | 2 --
 pyrenew/latent/hospitaladmissions.py               | 1 -
 pyrenew/latent/infection_functions.py              | 1 -
 pyrenew/latent/infection_initialization_method.py  | 1 -
 pyrenew/latent/infection_initialization_process.py | 1 -
 pyrenew/latent/infections.py                       | 1 -
 pyrenew/latent/infectionswithfeedback.py           | 1 -
 pyrenew/math.py                                    | 2 --
 pyrenew/mcmcutils.py                               | 2 --
 pyrenew/metaclass.py                               | 2 --
 pyrenew/model/__init__.py                          | 2 --
 pyrenew/model/admissionsmodel.py                   | 1 -
 pyrenew/model/rtinfectionsrenewalmodel.py          | 1 -
 pyrenew/observation/__init__.py                    | 2 --
 pyrenew/observation/negativebinomial.py            | 1 -
 pyrenew/observation/poisson.py                     | 1 -
 pyrenew/process/__init__.py                        | 2 --
 pyrenew/process/ar.py                              | 1 -
 pyrenew/process/differencedprocess.py              | 1 -
 pyrenew/process/iidrandomsequence.py               | 1 -
 pyrenew/process/randomwalk.py                      | 1 -
 pyrenew/randomvariable/__init__.py                 | 2 --
 pyrenew/regression.py                              | 2 --
 test/test_latent_admissions.py                     | 1 -
 test/test_latent_infections.py                     | 1 -
 test/test_leslie_matrix.py                         | 1 -
 test/test_logistic_susceptibility_adjustment.py    | 1 -
 test/test_model_basic_renewal.py                   | 1 -
 test/test_model_hosp_admissions.py                 | 1 -
 test/test_observation_negativebinom.py             | 1 -
 test/test_observation_poisson.py                   | 1 -
 test/test_predictive.py                            | 2 --
 test/test_process_asymptotics.py                   | 1 -
 test/test_random_key.py                            | 2 --
 test/test_regression.py                            | 2 --
 test/test_transformation.py                        | 2 --
 test/test_transformed_rv_class.py                  | 2 --
 test/utils.py                                      | 2 --
 43 files changed, 61 deletions(-)

diff --git a/pyrenew/convolve.py b/pyrenew/convolve.py
index de98b04f..44d98e4c 100755
--- a/pyrenew/convolve.py
+++ b/pyrenew/convolve.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 convolve
 
diff --git a/pyrenew/deterministic/__init__.py b/pyrenew/deterministic/__init__.py
index 83635649..0bde1e3e 100644
--- a/pyrenew/deterministic/__init__.py
+++ b/pyrenew/deterministic/__init__.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 # numpydoc ignore=GL08
 
 from pyrenew.deterministic.deterministic import DeterministicVariable
diff --git a/pyrenew/deterministic/deterministic.py b/pyrenew/deterministic/deterministic.py
index 13970e69..ad264570 100644
--- a/pyrenew/deterministic/deterministic.py
+++ b/pyrenew/deterministic/deterministic.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/deterministic/deterministicpmf.py b/pyrenew/deterministic/deterministicpmf.py
index 9763fd1b..daec0348 100644
--- a/pyrenew/deterministic/deterministicpmf.py
+++ b/pyrenew/deterministic/deterministicpmf.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/distutil.py b/pyrenew/distutil.py
index 206d3e80..315fc6b3 100755
--- a/pyrenew/distutil.py
+++ b/pyrenew/distutil.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 distutil
 
diff --git a/pyrenew/latent/__init__.py b/pyrenew/latent/__init__.py
index 046160fd..0d8a553a 100644
--- a/pyrenew/latent/__init__.py
+++ b/pyrenew/latent/__init__.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 # numpydoc ignore=GL08
 
 from pyrenew.latent.hospitaladmissions import HospitalAdmissions
diff --git a/pyrenew/latent/hospitaladmissions.py b/pyrenew/latent/hospitaladmissions.py
index 55689b8b..57090528 100644
--- a/pyrenew/latent/hospitaladmissions.py
+++ b/pyrenew/latent/hospitaladmissions.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/latent/infection_functions.py b/pyrenew/latent/infection_functions.py
index e2861f38..5fdbff6b 100755
--- a/pyrenew/latent/infection_functions.py
+++ b/pyrenew/latent/infection_functions.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/latent/infection_initialization_method.py b/pyrenew/latent/infection_initialization_method.py
index 537c2ca5..f4a0c0e7 100644
--- a/pyrenew/latent/infection_initialization_method.py
+++ b/pyrenew/latent/infection_initialization_method.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 from abc import ABCMeta, abstractmethod
 
diff --git a/pyrenew/latent/infection_initialization_process.py b/pyrenew/latent/infection_initialization_process.py
index cb52698d..74f8cd1e 100644
--- a/pyrenew/latent/infection_initialization_process.py
+++ b/pyrenew/latent/infection_initialization_process.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 from pyrenew.latent.infection_initialization_method import (
     InfectionInitializationMethod,
diff --git a/pyrenew/latent/infections.py b/pyrenew/latent/infections.py
index 06c93c53..ec8e6d74 100644
--- a/pyrenew/latent/infections.py
+++ b/pyrenew/latent/infections.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/latent/infectionswithfeedback.py b/pyrenew/latent/infectionswithfeedback.py
index f3d8ec8d..833087e2 100644
--- a/pyrenew/latent/infectionswithfeedback.py
+++ b/pyrenew/latent/infectionswithfeedback.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from typing import NamedTuple
diff --git a/pyrenew/math.py b/pyrenew/math.py
index 29eb18b5..feaafe21 100755
--- a/pyrenew/math.py
+++ b/pyrenew/math.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Helper functions for doing analytical
 and/or numerical calculations about
diff --git a/pyrenew/mcmcutils.py b/pyrenew/mcmcutils.py
index 2e70ec14..f5f0c404 100644
--- a/pyrenew/mcmcutils.py
+++ b/pyrenew/mcmcutils.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Utilities to deal with MCMC outputs
 """
diff --git a/pyrenew/metaclass.py b/pyrenew/metaclass.py
index ff71b683..00e85b43 100644
--- a/pyrenew/metaclass.py
+++ b/pyrenew/metaclass.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 pyrenew helper classes
 """
diff --git a/pyrenew/model/__init__.py b/pyrenew/model/__init__.py
index 44330c23..d30e0cc2 100644
--- a/pyrenew/model/__init__.py
+++ b/pyrenew/model/__init__.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 # numpydoc ignore=GL08
 
 from pyrenew.model.admissionsmodel import HospitalAdmissionsModel
diff --git a/pyrenew/model/admissionsmodel.py b/pyrenew/model/admissionsmodel.py
index 566783b0..1536ca79 100644
--- a/pyrenew/model/admissionsmodel.py
+++ b/pyrenew/model/admissionsmodel.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/model/rtinfectionsrenewalmodel.py b/pyrenew/model/rtinfectionsrenewalmodel.py
index 62cda6ff..fc8881dd 100644
--- a/pyrenew/model/rtinfectionsrenewalmodel.py
+++ b/pyrenew/model/rtinfectionsrenewalmodel.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/observation/__init__.py b/pyrenew/observation/__init__.py
index 5b4f7977..b0e04e69 100644
--- a/pyrenew/observation/__init__.py
+++ b/pyrenew/observation/__init__.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 # numpydoc ignore=GL08
 
 from pyrenew.observation.negativebinomial import NegativeBinomialObservation
diff --git a/pyrenew/observation/negativebinomial.py b/pyrenew/observation/negativebinomial.py
index bdc02265..2029eb24 100644
--- a/pyrenew/observation/negativebinomial.py
+++ b/pyrenew/observation/negativebinomial.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/observation/poisson.py b/pyrenew/observation/poisson.py
index 008c19b3..f9ee29d5 100644
--- a/pyrenew/observation/poisson.py
+++ b/pyrenew/observation/poisson.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/process/__init__.py b/pyrenew/process/__init__.py
index 638ea45d..b490575c 100644
--- a/pyrenew/process/__init__.py
+++ b/pyrenew/process/__init__.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 # numpydoc ignore=GL08
 
 from pyrenew.process.ar import ARProcess
diff --git a/pyrenew/process/ar.py b/pyrenew/process/ar.py
index feb10511..ea303dae 100644
--- a/pyrenew/process/ar.py
+++ b/pyrenew/process/ar.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/process/differencedprocess.py b/pyrenew/process/differencedprocess.py
index b19173f2..99cb87fc 100644
--- a/pyrenew/process/differencedprocess.py
+++ b/pyrenew/process/differencedprocess.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from __future__ import annotations
diff --git a/pyrenew/process/iidrandomsequence.py b/pyrenew/process/iidrandomsequence.py
index 10adfa9c..5f64d7f1 100644
--- a/pyrenew/process/iidrandomsequence.py
+++ b/pyrenew/process/iidrandomsequence.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 import numpyro.distributions as dist
diff --git a/pyrenew/process/randomwalk.py b/pyrenew/process/randomwalk.py
index 6b0a763d..813f8cff 100644
--- a/pyrenew/process/randomwalk.py
+++ b/pyrenew/process/randomwalk.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 import numpyro.distributions as dist
diff --git a/pyrenew/randomvariable/__init__.py b/pyrenew/randomvariable/__init__.py
index 4f154b2d..c599d101 100644
--- a/pyrenew/randomvariable/__init__.py
+++ b/pyrenew/randomvariable/__init__.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 # numpydoc ignore=GL08
 
 from pyrenew.randomvariable.distributionalvariable import (
diff --git a/pyrenew/regression.py b/pyrenew/regression.py
index ff38006a..9348958e 100755
--- a/pyrenew/regression.py
+++ b/pyrenew/regression.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Helper classes for regression problems
 """
diff --git a/test/test_latent_admissions.py b/test/test_latent_admissions.py
index 1e82db89..c2a260f7 100644
--- a/test/test_latent_admissions.py
+++ b/test/test_latent_admissions.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from test.utils import SimpleRt
diff --git a/test/test_latent_infections.py b/test/test_latent_infections.py
index 7fc500f5..f90819f2 100755
--- a/test/test_latent_infections.py
+++ b/test/test_latent_infections.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 from test.utils import SimpleRt
diff --git a/test/test_leslie_matrix.py b/test/test_leslie_matrix.py
index 25086188..36106853 100755
--- a/test/test_leslie_matrix.py
+++ b/test/test_leslie_matrix.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 import jax.numpy as jnp
diff --git a/test/test_logistic_susceptibility_adjustment.py b/test/test_logistic_susceptibility_adjustment.py
index 06442298..2f8edd3c 100755
--- a/test/test_logistic_susceptibility_adjustment.py
+++ b/test/test_logistic_susceptibility_adjustment.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 import jax.numpy as jnp
diff --git a/test/test_model_basic_renewal.py b/test/test_model_basic_renewal.py
index 1b0314f8..d83906cb 100644
--- a/test/test_model_basic_renewal.py
+++ b/test/test_model_basic_renewal.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 
diff --git a/test/test_model_hosp_admissions.py b/test/test_model_hosp_admissions.py
index f6d3d3a2..a67056ca 100644
--- a/test/test_model_hosp_admissions.py
+++ b/test/test_model_hosp_admissions.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 
diff --git a/test/test_observation_negativebinom.py b/test/test_observation_negativebinom.py
index d73a3ac4..77a6dcf1 100644
--- a/test/test_observation_negativebinom.py
+++ b/test/test_observation_negativebinom.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 import numpy as np
diff --git a/test/test_observation_poisson.py b/test/test_observation_poisson.py
index d5758583..4fb7f664 100644
--- a/test/test_observation_poisson.py
+++ b/test/test_observation_poisson.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 import jax.numpy as jnp
diff --git a/test/test_predictive.py b/test/test_predictive.py
index 636578bb..9e17a97a 100644
--- a/test/test_predictive.py
+++ b/test/test_predictive.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Ensures that posterior predictive samples are not generated
 when no posterior samples are available.
diff --git a/test/test_process_asymptotics.py b/test/test_process_asymptotics.py
index c50a5c92..25079c93 100755
--- a/test/test_process_asymptotics.py
+++ b/test/test_process_asymptotics.py
@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 # numpydoc ignore=GL08
 
 import jax.numpy as jnp
diff --git a/test/test_random_key.py b/test/test_random_key.py
index 0b99816f..a6be9a11 100644
--- a/test/test_random_key.py
+++ b/test/test_random_key.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Ensures that models created with the same or
 with different random keys behave appropriately.
diff --git a/test/test_regression.py b/test/test_regression.py
index 4713f546..cdb39e32 100755
--- a/test/test_regression.py
+++ b/test/test_regression.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Tests for regression functionality
 """
diff --git a/test/test_transformation.py b/test/test_transformation.py
index b48d1a0d..834b1156 100644
--- a/test/test_transformation.py
+++ b/test/test_transformation.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Tests for transformations
 """
diff --git a/test/test_transformed_rv_class.py b/test/test_transformed_rv_class.py
index 22dd1c2c..a3a9d44e 100644
--- a/test/test_transformed_rv_class.py
+++ b/test/test_transformed_rv_class.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 Tests for TransformedVariable class
 """
diff --git a/test/utils.py b/test/utils.py
index ac345b41..7a51e55c 100644
--- a/test/utils.py
+++ b/test/utils.py
@@ -1,5 +1,3 @@
-# -*- coding: utf-8 -*-
-
 """
 test utilities
 """