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'str' object has no attribute 'tag' 'NoneType' object is not subscriptable #850

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LauraGomez96 opened this issue Aug 26, 2022 · 2 comments

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@LauraGomez96
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LauraGomez96 commented Aug 26, 2022

Describe the bug
I have problems in the data processing. When I try with mzML files I get the error: '''str' object has no attribute 'tag'''. When I try with mzxML files I get the error: '''NoneType' object is not subscriptable''. Then according to what I found in the forum also tryed with CDF files but I get the error: 'numpy.float64' object has no attribute 'split'

To Reproduce
Steps/Task to reproduce the behavior:

  1. Go to: Data Processing - Deconvolution
  2. Click on: Process Raw GC-MS data
  3. Then I am able to submit the files. However, with all the formats I keep having an error making impossible to continue with the analysis.
  4. See error

Expected behavior
I would like to obtain the analysis of my chromatograms.

Screenshots

Screenshot 2022-08-26 at 10 46 34 AM
Screenshot 2022-08-26 at 10 47 02 AM
Screenshot 2022-08-26 at 10 56 54 AM

Additional context
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@mwang87
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mwang87 commented Aug 26, 2022

I think whats happening is your mzXML has empty scans (scans with no peaks) which the software does not like.

@LauraGomez96
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it cannot be, because when I open the same files on OpenChrom I can see the peacks.

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