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rds2py

Parse and construct Python representations for datasets stored in RDS files. rds2py supports various base classes from R, and Bioconductor’s SummarizedExperiment and SingleCellExperiment S4 classes. For more details, check out rds2cpp library.

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Important Version Notice

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Version 0.5.0 brings major changes to the package:

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Version 0.5.0 brings major changes to the package,

  • Complete overhaul of the codebase using pybind11

  • Streamlined readers for R data types

  • Updated API for all classes and methods

Please refer to the documentation for the latest usage guidelines. Previous versions may have incompatible APIs.

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The package provides:

  • Efficient parsing of RDS files with minimal memory overhead

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    Write-your-own-readerprint(data)