From 1f9a6100ddf95cce67315c4c09e92658ffcb9b7d Mon Sep 17 00:00:00 2001
From: Jayaram Kancherla <jayaram.kancherla@gmail.com>
Date: Thu, 3 Oct 2024 11:26:32 -0700
Subject: [PATCH] Bump `SingleCellExperiment` to resolve package version issues
 with anndata/mudata (#36)

---
 setup.cfg | 8 ++------
 1 file changed, 2 insertions(+), 6 deletions(-)

diff --git a/setup.cfg b/setup.cfg
index 5ee1f2b..0873945 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -63,9 +63,7 @@ exclude =
 # `pip install MultiAssayExperiment[PDF]` like:
 # PDF = ReportLab; RXP
 optional =
-    singlecellexperiment
-    anndata
-    mudata
+    singlecellexperiment[optional]>=0.4.7
     genomicranges
     delayedarray
 
@@ -74,10 +72,8 @@ testing =
     setuptools
     pytest
     pytest-cov
-    anndata
     pandas
-    mudata
-    singlecellexperiment
+    singlecellexperiment[testing]>=0.4.7
     genomicranges
     delayedarray