diff --git a/.buildinfo b/.buildinfo index 5c317c4..65df7f3 100644 --- a/.buildinfo +++ b/.buildinfo @@ -1,4 +1,4 @@ # Sphinx build info version 1 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. -config: 7d2132119fac657cacbfac1aa0126eff +config: c53864aaff301981b88812296b71c2ca tags: 645f666f9bcd5a90fca523b33c5a78b7 diff --git a/_modules/biocutils/BooleanList.html b/_modules/biocutils/BooleanList.html index 78c78fb..4e92241 100644 --- a/_modules/biocutils/BooleanList.html +++ b/_modules/biocutils/BooleanList.html @@ -5,7 +5,7 @@ - biocutils.BooleanList - biocutils 0.1.6 documentation + biocutils.BooleanList - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation
+
diff --git a/_modules/biocutils/Factor.html b/_modules/biocutils/Factor.html index 0766801..9e88612 100644 --- a/_modules/biocutils/Factor.html +++ b/_modules/biocutils/Factor.html @@ -5,7 +5,7 @@ - biocutils.Factor - biocutils 0.1.6 documentation + biocutils.Factor - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -1138,7 +1138,7 @@

Source code for biocutils.Factor
-
+
diff --git a/_modules/biocutils/FloatList.html b/_modules/biocutils/FloatList.html index afaab7d..733c7a8 100644 --- a/_modules/biocutils/FloatList.html +++ b/_modules/biocutils/FloatList.html @@ -5,7 +5,7 @@ - biocutils.FloatList - biocutils 0.1.6 documentation + biocutils.FloatList - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -382,7 +382,7 @@

Source code for biocutils.FloatList
-
+
diff --git a/_modules/biocutils/IntegerList.html b/_modules/biocutils/IntegerList.html index 4aeee81..4410c28 100644 --- a/_modules/biocutils/IntegerList.html +++ b/_modules/biocutils/IntegerList.html @@ -5,7 +5,7 @@ - biocutils.IntegerList - biocutils 0.1.6 documentation + biocutils.IntegerList - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -382,7 +382,7 @@

Source code for biocutils.IntegerList
-
+
diff --git a/_modules/biocutils/NamedList.html b/_modules/biocutils/NamedList.html index a74167f..353d776 100644 --- a/_modules/biocutils/NamedList.html +++ b/_modules/biocutils/NamedList.html @@ -5,7 +5,7 @@ - biocutils.NamedList - biocutils 0.1.6 documentation + biocutils.NamedList - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -904,7 +904,7 @@

Source code for biocutils.NamedList
-
+
diff --git a/_modules/biocutils/Names.html b/_modules/biocutils/Names.html index a698029..c9cb3fd 100644 --- a/_modules/biocutils/Names.html +++ b/_modules/biocutils/Names.html @@ -5,7 +5,7 @@ - biocutils.Names - biocutils 0.1.6 documentation + biocutils.Names - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -768,7 +768,7 @@

Source code for biocutils.Names
-
+
diff --git a/_modules/biocutils/StringList.html b/_modules/biocutils/StringList.html index 039535d..4410c41 100644 --- a/_modules/biocutils/StringList.html +++ b/_modules/biocutils/StringList.html @@ -5,7 +5,7 @@ - biocutils.StringList - biocutils 0.1.6 documentation + biocutils.StringList - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -377,7 +377,7 @@

Source code for biocutils.StringList
-
+
diff --git a/_modules/biocutils/assign.html b/_modules/biocutils/assign.html index 1d46270..4099a76 100644 --- a/_modules/biocutils/assign.html +++ b/_modules/biocutils/assign.html @@ -5,7 +5,7 @@ - biocutils.assign - biocutils 0.1.6 documentation + biocutils.assign - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -302,7 +302,7 @@

Source code for biocutils.assign
-
+
diff --git a/_modules/biocutils/assign_rows.html b/_modules/biocutils/assign_rows.html index f71a28c..2d8bc18 100644 --- a/_modules/biocutils/assign_rows.html +++ b/_modules/biocutils/assign_rows.html @@ -5,7 +5,7 @@ - biocutils.assign_rows - biocutils 0.1.6 documentation + biocutils.assign_rows - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -322,7 +322,7 @@

Source code for biocutils.assign_rows
-
+
diff --git a/_modules/biocutils/assign_sequence.html b/_modules/biocutils/assign_sequence.html index adc3a7e..6978128 100644 --- a/_modules/biocutils/assign_sequence.html +++ b/_modules/biocutils/assign_sequence.html @@ -5,7 +5,7 @@ - biocutils.assign_sequence - biocutils 0.1.6 documentation + biocutils.assign_sequence - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -343,7 +343,7 @@

Source code for biocutils.assign_sequence
-
+
diff --git a/_modules/biocutils/combine.html b/_modules/biocutils/combine.html index 9d6bb2c..5b10619 100644 --- a/_modules/biocutils/combine.html +++ b/_modules/biocutils/combine.html @@ -5,7 +5,7 @@ - biocutils.combine - biocutils 0.1.6 documentation + biocutils.combine - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -314,7 +314,7 @@

Source code for biocutils.combine
-
+
diff --git a/_modules/biocutils/combine_columns.html b/_modules/biocutils/combine_columns.html index d3c587c..a0f50e3 100644 --- a/_modules/biocutils/combine_columns.html +++ b/_modules/biocutils/combine_columns.html @@ -5,7 +5,7 @@ - biocutils.combine_columns - biocutils 0.1.6 documentation + biocutils.combine_columns - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -371,7 +371,7 @@

Source code for biocutils.combine_columns
-
+
diff --git a/_modules/biocutils/combine_rows.html b/_modules/biocutils/combine_rows.html index a6dea67..7bffcdc 100644 --- a/_modules/biocutils/combine_rows.html +++ b/_modules/biocutils/combine_rows.html @@ -5,7 +5,7 @@ - biocutils.combine_rows - biocutils 0.1.6 documentation + biocutils.combine_rows - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -374,7 +374,7 @@

Source code for biocutils.combine_rows
-
+
diff --git a/_modules/biocutils/combine_sequences.html b/_modules/biocutils/combine_sequences.html index e1a71a1..a7b8bf7 100644 --- a/_modules/biocutils/combine_sequences.html +++ b/_modules/biocutils/combine_sequences.html @@ -5,7 +5,7 @@ - biocutils.combine_sequences - biocutils 0.1.6 documentation + biocutils.combine_sequences - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -381,7 +381,7 @@

Source code for biocutils.combine_sequences
-
+
diff --git a/_modules/biocutils/convert_to_dense.html b/_modules/biocutils/convert_to_dense.html index 0b3e03d..c4f9ace 100644 --- a/_modules/biocutils/convert_to_dense.html +++ b/_modules/biocutils/convert_to_dense.html @@ -5,7 +5,7 @@ - biocutils.convert_to_dense - biocutils 0.1.6 documentation + biocutils.convert_to_dense - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -322,7 +322,7 @@

Source code for biocutils.convert_to_dense
-
+
diff --git a/_modules/biocutils/extract_column_names.html b/_modules/biocutils/extract_column_names.html index ed83b84..8dc40fc 100644 --- a/_modules/biocutils/extract_column_names.html +++ b/_modules/biocutils/extract_column_names.html @@ -5,7 +5,7 @@ - biocutils.extract_column_names - biocutils 0.1.6 documentation + biocutils.extract_column_names - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -308,7 +308,7 @@

Source code for biocutils.extract_column_names

-
+
diff --git a/_modules/biocutils/extract_row_names.html b/_modules/biocutils/extract_row_names.html index cb0c68d..72d316e 100644 --- a/_modules/biocutils/extract_row_names.html +++ b/_modules/biocutils/extract_row_names.html @@ -5,7 +5,7 @@ - biocutils.extract_row_names - biocutils 0.1.6 documentation + biocutils.extract_row_names - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -308,7 +308,7 @@

Source code for biocutils.extract_row_names
-
+
diff --git a/_modules/biocutils/factorize.html b/_modules/biocutils/factorize.html index 89786a1..736b417 100644 --- a/_modules/biocutils/factorize.html +++ b/_modules/biocutils/factorize.html @@ -5,7 +5,7 @@ - biocutils.factorize - biocutils 0.1.6 documentation + biocutils.factorize - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -325,7 +325,7 @@

Source code for biocutils.factorize
-
+
diff --git a/_modules/biocutils/get_height.html b/_modules/biocutils/get_height.html index 94bd09d..2172323 100644 --- a/_modules/biocutils/get_height.html +++ b/_modules/biocutils/get_height.html @@ -5,7 +5,7 @@ - biocutils.get_height - biocutils 0.1.6 documentation + biocutils.get_height - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -301,7 +301,7 @@

Source code for biocutils.get_height
-
+
diff --git a/_modules/biocutils/intersect.html b/_modules/biocutils/intersect.html index d562ad9..9437d08 100644 --- a/_modules/biocutils/intersect.html +++ b/_modules/biocutils/intersect.html @@ -5,7 +5,7 @@ - biocutils.intersect - biocutils 0.1.6 documentation + biocutils.intersect - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -363,7 +363,7 @@

Source code for biocutils.intersect
-
+
diff --git a/_modules/biocutils/is_high_dimensional.html b/_modules/biocutils/is_high_dimensional.html index 36e5f76..3e0b9ae 100644 --- a/_modules/biocutils/is_high_dimensional.html +++ b/_modules/biocutils/is_high_dimensional.html @@ -5,7 +5,7 @@ - biocutils.is_high_dimensional - biocutils 0.1.6 documentation + biocutils.is_high_dimensional - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -294,7 +294,7 @@

Source code for biocutils.is_high_dimensional

-
+
diff --git a/_modules/biocutils/is_list_of_type.html b/_modules/biocutils/is_list_of_type.html index e34066c..96fed2b 100644 --- a/_modules/biocutils/is_list_of_type.html +++ b/_modules/biocutils/is_list_of_type.html @@ -5,7 +5,7 @@ - biocutils.is_list_of_type - biocutils 0.1.6 documentation + biocutils.is_list_of_type - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -307,7 +307,7 @@

Source code for biocutils.is_list_of_type
-
+
diff --git a/_modules/biocutils/is_missing_scalar.html b/_modules/biocutils/is_missing_scalar.html index 9d6c430..a38f379 100644 --- a/_modules/biocutils/is_missing_scalar.html +++ b/_modules/biocutils/is_missing_scalar.html @@ -5,7 +5,7 @@ - biocutils.is_missing_scalar - biocutils 0.1.6 documentation + biocutils.is_missing_scalar - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -290,7 +290,7 @@

Source code for biocutils.is_missing_scalar
-
+
diff --git a/_modules/biocutils/map_to_index.html b/_modules/biocutils/map_to_index.html index 4f47d0c..73b3397 100644 --- a/_modules/biocutils/map_to_index.html +++ b/_modules/biocutils/map_to_index.html @@ -5,7 +5,7 @@ - biocutils.map_to_index - biocutils 0.1.6 documentation + biocutils.map_to_index - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -309,7 +309,7 @@

Source code for biocutils.map_to_index
-
+
diff --git a/_modules/biocutils/match.html b/_modules/biocutils/match.html index 0cebb53..ca9c0b7 100644 --- a/_modules/biocutils/match.html +++ b/_modules/biocutils/match.html @@ -5,7 +5,7 @@ - biocutils.match - biocutils 0.1.6 documentation + biocutils.match - biocutils 0.1.7 documentation @@ -165,7 +165,7 @@
-
biocutils 0.1.6 documentation
 +
biocutils 0.1.7 documentation
@@ -189,7 +189,7 @@
- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -242,8 +242,7 @@

Source code for biocutils.match

-from typing import Sequence, Union
-
+from typing import Sequence, Union, Optional
 import numpy
 
 from .map_to_index import DUPLICATE_METHOD, map_to_index
@@ -255,6 +254,7 @@ 
Source code for biocutils.match
     x: Sequence,
     targets: Union[dict, Sequence],
     duplicate_method: DUPLICATE_METHOD = "first",
+    dtype: Optional[numpy.ndarray] = None,
 ) -> numpy.ndarray:
     """Find a matching value of each element of ``x`` in ``target``.
 
@@ -270,6 +270,11 @@ 
Source code for biocutils.match
             How to handle duplicate entries in ``targets``. Matches can
             be reported to the first or last occurrence of duplicates.
 
+        dtype:
+            NumPy type of the output array. This should be an integer type; if
+            missing values are expected, the type should be a signed integer.
+            If None, a suitable type is automatically determined.
+
     Returns:
         Array of length equal to ``x``, containing the integer position of each
         entry of ``x`` inside ``target``; or -1, if the entry of ``x`` is
@@ -278,9 +283,10 @@ 
Source code for biocutils.match
     if not isinstance(targets, dict):
         targets = map_to_index(targets, duplicate_method=duplicate_method)
 
-    indices = numpy.zeros(
-        len(x), dtype=numpy.min_scalar_type(-len(targets))
-    )  # get a signed type
+    if dtype is None:
+        dtype = numpy.min_scalar_type(-len(targets)) # get a signed type
+    indices = numpy.zeros(len(x), dtype=dtype)
+
     for i, y in enumerate(x):
         if y not in targets:
             indices[i] = -1
@@ -321,7 +327,7 @@ 
Source code for biocutils.match
       
     
   

-

+

     
     
     
diff --git a/_modules/biocutils/normalize_subscript.html b/_modules/biocutils/normalize_subscript.html
index 42331d0..7289870 100644
--- a/_modules/biocutils/normalize_subscript.html
+++ b/_modules/biocutils/normalize_subscript.html
@@ -5,7 +5,7 @@
     
 
     
-        biocutils.normalize_subscript - biocutils 0.1.6 documentation
+        biocutils.normalize_subscript - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

-      
biocutils 0.1.6 documentation

+      
biocutils 0.1.7 documentation

     

     

       

@@ -189,7 +189,7 @@
       

   
   
-  biocutils 0.1.6 documentation
+  biocutils 0.1.7 documentation
   
 
   
@@ -526,7 +526,7 @@ 
Source code for biocutils.normalize_subscript

   

-

+

     
     
     
diff --git a/_modules/biocutils/package_utils.html b/_modules/biocutils/package_utils.html
index c2112bd..66357ae 100644
--- a/_modules/biocutils/package_utils.html
+++ b/_modules/biocutils/package_utils.html
@@ -5,7 +5,7 @@
     
 
     
-        biocutils.package_utils - biocutils 0.1.6 documentation
+        biocutils.package_utils - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

-      
biocutils 0.1.6 documentation

+      
biocutils 0.1.7 documentation

     

     

       

@@ -189,7 +189,7 @@
       

   
   
-  biocutils 0.1.6 documentation
+  biocutils 0.1.7 documentation
   
 
   
@@ -299,7 +299,7 @@ 
Source code for biocutils.package_utils
       
     
   

-

+

     
     
     
diff --git a/_modules/biocutils/print_truncated.html b/_modules/biocutils/print_truncated.html
index d7c2310..60452ee 100644
--- a/_modules/biocutils/print_truncated.html
+++ b/_modules/biocutils/print_truncated.html
@@ -5,7 +5,7 @@
     
 
     
-        biocutils.print_truncated - biocutils 0.1.6 documentation
+        biocutils.print_truncated - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

-      
biocutils 0.1.6 documentation

+      
biocutils 0.1.7 documentation

     

     

       

@@ -189,7 +189,7 @@
       

   
   
-  biocutils 0.1.6 documentation
+  biocutils 0.1.7 documentation
   
 
   
@@ -436,7 +436,7 @@ 
Source code for biocutils.print_truncated
       
     
   

-

+

     
     
     
diff --git a/_modules/biocutils/print_wrapped_table.html b/_modules/biocutils/print_wrapped_table.html
index b0ba6e1..014e280 100644
--- a/_modules/biocutils/print_wrapped_table.html
+++ b/_modules/biocutils/print_wrapped_table.html
@@ -5,7 +5,7 @@
     
 
     
-        biocutils.print_wrapped_table - biocutils 0.1.6 documentation
+        biocutils.print_wrapped_table - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

-      
biocutils 0.1.6 documentation

+      
biocutils 0.1.7 documentation

     

     

       

@@ -189,7 +189,7 @@
       

   
   
-  biocutils 0.1.6 documentation
+  biocutils 0.1.7 documentation
   
 
   
@@ -446,7 +446,7 @@ 
Source code for biocutils.print_wrapped_table

   

-

+

     
     
     
diff --git a/_modules/biocutils/relaxed_combine_columns.html b/_modules/biocutils/relaxed_combine_columns.html
index 61d2ec2..a993a09 100644
--- a/_modules/biocutils/relaxed_combine_columns.html
+++ b/_modules/biocutils/relaxed_combine_columns.html
@@ -5,7 +5,7 @@
     
 
     
-        biocutils.relaxed_combine_columns - biocutils 0.1.6 documentation
+        biocutils.relaxed_combine_columns - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

-      
biocutils 0.1.6 documentation

+      
biocutils 0.1.7 documentation

     

     

       

@@ -189,7 +189,7 @@
       

   
   
-  biocutils 0.1.6 documentation
+  biocutils 0.1.7 documentation
   
 
   
@@ -312,7 +312,7 @@ 
Source code for biocutils.relaxed_combine_columns

   

-

+

     
     
     
diff --git a/_modules/biocutils/relaxed_combine_rows.html b/_modules/biocutils/relaxed_combine_rows.html
index c5a16ad..8634644 100644
--- a/_modules/biocutils/relaxed_combine_rows.html
+++ b/_modules/biocutils/relaxed_combine_rows.html
@@ -5,7 +5,7 @@
     
 
     
-        biocutils.relaxed_combine_rows - biocutils 0.1.6 documentation
+        biocutils.relaxed_combine_rows - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

-      
biocutils 0.1.6 documentation

+      
biocutils 0.1.7 documentation

     

     

       

@@ -189,7 +189,7 @@
       

   
   
-  biocutils 0.1.6 documentation
+  biocutils 0.1.7 documentation
   
 
   
@@ -310,7 +310,7 @@ 
Source code for biocutils.relaxed_combine_rows

   

-

+

     
     
     
diff --git a/_modules/biocutils/reverse_index.html b/_modules/biocutils/reverse_index.html
index c8d188f..b4eef2f 100644
--- a/_modules/biocutils/reverse_index.html
+++ b/_modules/biocutils/reverse_index.html
@@ -5,7 +5,7 @@
     
 
     
-        biocutils.reverse_index - biocutils 0.1.6 documentation
+        biocutils.reverse_index - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

-      
biocutils 0.1.6 documentation

+      
biocutils 0.1.7 documentation

     

     

       

@@ -189,7 +189,7 @@
       

   
   
-  biocutils 0.1.6 documentation
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Source code for biocutils.reverse_index
       
     
   

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+

     
     
     
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index b071775..1b07fad 100644
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Source code for biocutils.show_as_cell
       
     
   

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+

     
     
     
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index 94ad479..56853ed 100644
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Source code for biocutils.subset
       
     
   

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+

     
     
     
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index f874443..926cf65 100644
--- a/_modules/biocutils/subset_rows.html
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+        biocutils.subset_rows - biocutils 0.1.7 documentation
       
     
     
@@ -165,7 +165,7 @@
       
     

     

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+  biocutils 0.1.7 documentation
   
 
   
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+

     
     
     
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index e2d1b4a..2f5a7c0 100644
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+      
biocutils 0.1.7 documentation

     

     

       

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Source code for biocutils.subset_sequence
       
     
   

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+

     
     
     
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index f663815..0e031ca 100644
--- a/_modules/biocutils/union.html
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+  biocutils 0.1.7 documentation
   
 
   
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Source code for biocutils.union
       
     
   

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+

     
     
     
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index 0d14fa7..d8921d0 100644
--- a/_modules/index.html
+++ b/_modules/index.html
@@ -5,7 +5,7 @@
     
 
     
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All modules for which code is available

       
     
   

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+

     
     
     
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index 462d975..8d5909e 100644
--- a/_static/documentation_options.js
+++ b/_static/documentation_options.js
@@ -1,5 +1,5 @@
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+    VERSION: '0.1.7',
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diff --git a/api/biocutils.html b/api/biocutils.html
index e636a30..9c7aaff 100644
--- a/api/biocutils.html
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- biocutils 0.1.6 documentation + biocutils 0.1.7 documentation @@ -2227,7 +2227,7 @@

Submodules

biocutils.match module¶

-biocutils.match.match(x, targets, duplicate_method='first')[source]¶
+biocutils.match.match(x, targets, duplicate_method='first', dtype=None)[source]¶

Find a matching value of each element of x in target.

Parameters:
@@ -2238,6 +2238,9 @@

Submodulesmap_to_index().

  • duplicate_method (Literal['first', 'last']) – How to handle duplicate entries in targets. Matches can be reported to the first or last occurrence of duplicates.

    • +

  • dtype (Optional[ndarray]) – NumPy type of the output array. This should be an integer type; if +missing values are expected, the type should be a signed integer. +If None, a suitable type is automatically determined.

    • Return type:
    @@ -3076,7 +3079,7 @@

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    -
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  • License
  • Authors
  • Changelog
    • @@ -349,7 +350,7 @@

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    biocutils 0.1.7 documentation
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    License¶

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    +
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    Python Module Index

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