config.txt

#initial commands ...
source ~/.cshrc
source ~/wire-cell/wcp_tcsh
conda activate scn 

# configuration code ...
waf --prefix=../wcp_install --build-debug=-ggdb3 --boost-includes=$WC_EXTERNALS/include --boost-libs=$WC_EXTERNALS/lib --boost-mt --with-root=$WC_EXTERNALS --with-fftw-include=$WC_EXTERNALS/include --with-fftw-lib=$WC_EXTERNALS/lib --with-eigen=$WC_EXTERNALS --with-glpk --with-glpk-include=/usr/include --with-glpk-lib=/usr/lib/x86_64-linux-gnu --with-python=/home/xqian/anaconda3/envs/scn --with-python-include=/home/xqian/anaconda3/envs/scn/include/python2.7 --with-python-lib=/home/xqian/anaconda3/envs/scn/lib clean configure

#WCGPU examples 
./waf-tools/waf --prefix=$PREFIX --build-debug="-ggdb3 -O2" --boost-includes=$PREFIX/include --boost-libs=$PREFIX/lib --boost-mt --with-root=$PREFIX --with-fftw-include=$PREFIX/include --with-fftw-lib=$PREFIX/lib --with-eigen=$PREFIX --with-glpk --with-glpk-include=$PREFIX/include --with-glpk-lib=$PREFIX/lib --with-python=$PREFIX --with-python-include=$PREFIX/include/python3.11 --with-python-lib=$PREFIX/lib clean configure


Cheet sheet on the command:

Reco 1.5 Data:
wire-cell-imaging-lmem-celltree ./input_data_files/ChannelWireGeometry_v2.txt $input_celltree $n -d0 -s2
prod-wire-cell-matching-nusel ./input_data_files/ChannelWireGeometry_v2.txt imaging_$input2.root -d0 

Reco 1.5 MC:
wire-cell-imaging-lmem-celltree ./input_data_files/ChannelWireGeometry_v2.txt $input_celltree $n -d1 -s2
prod-wire-cell-matching-nusel ./input_data_files/ChannelWireGeometry_v2.txt imaging_$input2.root -d1 


Recno 2.0 Data/MC:
wire-cell-prod-stm ./input_data_files/ChannelWireGeometry_v2.txt $wcreco2_input_celltree $nn -d0 -o0 -g2
wire-cell-prod-nue ./input_data_files/ChannelWireGeometry_v2.txt $wcreco2_input_celltree $nn -d0