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Refactor spherical mean estimation of data #11

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rutgerfick opened this issue Jun 28, 2018 · 0 comments
Open

Refactor spherical mean estimation of data #11

rutgerfick opened this issue Jun 28, 2018 · 0 comments

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@rutgerfick
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Current implementation in dmipy/dmipy/utils/spherical_mean.py is very slow and ugly with shell-wise for-loops. In spherical mean model fitting it is often half the estimation time.

  • precalculate and pre-invert multishell spherical mean observation matrix A_sm_inv in acquisition scheme
  • multi-shell spherical mean estimation should be nothing more than sm = np.dot(A_sm_inv, data)
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