You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
First of all, thank you for creating such a great software, I used bioconda installation and successfully ran the code: python VIBRANT_setup.py -test and saw: VIBRANT v1.2.1 is good to go! See example_data/ for quick test files. But when I run python3 VIBRANT_run.py -i example_data/mixed_example.fasta -folder ~/result -d ~/miniconda3/envs/databases, VIBRANT_log_run_mixed _example.log log with the following error VIBRANT error: could not identify VIBRANT_categories.tsv in files directory. however I am sure I have the file in my database. However, I am sure I have the file in my database and chmod 777 changed the permissions. Looking forward to your answers to the questions.
The text was updated successfully, but these errors were encountered:
Excuse me, can I ask you how you solved this problem?
From https://codeload.github.com/AnantharamanLab/VIBRANT/zip/refs/heads/master Copy the files folder, the scripts folder, the VIBRANT_run.py file, and the VIBRANT_setup.py file from the downloaded zip to your database, and when you encounter a "license denied" during the run, feel free to
sudo chmod -R 777 filename
Excuse me, can I ask you how you solved this problem?
From https://codeload.github.com/AnantharamanLab/VIBRANT/zip/refs/heads/master Copy the files folder, the scripts folder, the VIBRANT_run.py file, and the VIBRANT_setup.py file from the downloaded zip to your database, and when you encounter a "license denied" during the run, feel free to
sudo chmod -R 777 filename
Thank you very much for your answer! I've been able to run my tasks.
First of all, thank you for creating such a great software, I used bioconda installation and successfully ran the code: python VIBRANT_setup.py -test and saw: VIBRANT v1.2.1 is good to go! See example_data/ for quick test files. But when I run python3 VIBRANT_run.py -i example_data/mixed_example.fasta -folder ~/result -d ~/miniconda3/envs/databases, VIBRANT_log_run_mixed _example.log log with the following error VIBRANT error: could not identify VIBRANT_categories.tsv in files directory. however I am sure I have the file in my database. However, I am sure I have the file in my database and chmod 777 changed the permissions. Looking forward to your answers to the questions.
The text was updated successfully, but these errors were encountered: