README ARM badge link broken (Jupyter lab message: "Could not find path: user-data-home/comble-mip/notebooks")

[slayoo]

The "ACE Environment" badge at the top of the README leads to a non-existing path. Jupyter lab reports "Could not find path: user-data-home/comble-mip/notebooks"

comble-mip/README.md

Line 3 in 854b3de

[](https://jupyterhub.arm.gov/hub/user-redirect/git-pull?repo=https%3A//github.com/ARM-Development/comble-mip&urlpath=lab/tree/comble-mip/../user-data-home/comble-mip/notebooks&branch=main)

[slayoo]

for the record: noticed on an ordinary account without elevated privilages

[twjuliano]

@slayoo Thanks for reporting this issue. As we discussed via email, we believe this is likely due to not having elevated privileges.

@mgrover1 Could you please confirm this is the culprit? Thanks!

[mgrover1]

Agreed! You need the elevated privileges to access this.

[twjuliano]

Please apply for elevated access using the instructions on our project website.

[slayoo]

Thanks, if you'd have any hints on how to construct a link to a notebook within a pulled repo, for ordinary users, this would be of great help. (we're trying to help users of the PyPartMC package to quickly open example notebooks on the ARM Jupyter Hub, but have so far not found a way to direct to a particular file, like it is doable for Colab or mybinder.org)

relevant PR here: https://github.com/open-atmos/PyPartMC/pull/331/files

[twjuliano]

Thanks, if you'd have any hints on how to construct a link to a notebook within a pulled repo, for ordinary users, this would be of great help. (we're trying to help users of the PyPartMC package to quickly open example notebooks on the ARM Jupyter Hub, but have so far not found a way to direct to a particular file, like it is doable for Colab or mybinder.org)

relevant PR here: https://github.com/open-atmos/PyPartMC/pull/331/files

Pinging @mgrover1 since he would be the person to ask.

[mgrover1]

You can use nbgitpuller, which is what we used
https://nbgitpuller.readthedocs.io/en/latest/link.html

If this is within the scope of ARM, I would suggest submitting a contribution to the ARM-Notebooks repo which would make it more findable within the ARM community, and automatically build that link for you on one of the pages.

[slayoo]

thanks @mgrover1

We've searched through the nbgitpuller docs, but couldn't find anything that would help with getting right into a particular directory with ARM JupyerHub (as the username is part of the path - that's the reason I've opened this issue after noticing that the same happens with the link in COMBLE README)

The best link we've come up so far is:

The PyPartMC project is very much within ARM scope (and the development was supported through an ARM project).
However, we are at a stage when the example notebooks in PyPartMC repo are continuesly changing and being developed - hence storing them within external repo could risk lower maintainability ?

BTW, for installing PyPartMC when running the example notebooks, we use the following header cell:

    import os, sys
    if 'JUPYTER_IMAGE' in os.environ and '.arm.gov' in os.environ['JUPYTER_IMAGE']:
        !pip --quiet install PyPartMC
        _pypartmc_path = !pip show PyPartMC | fgrep Location | cut -f2 -d' '
        sys.path.extend(_pypartmc_path if _pypartmc_path[0] not in sys.path else [])