DEPENDENCIES

All computations are done on Cartesius of Surfsara.

The python 3.7 virtual environment used to run the analysis is saved as conda_list.txt in the documentation folder.

The 'run' scripts that enable scheduled (parallel) computing on Cartesius use sbatch.

WORKFLOW

time averaging selected fields of monthly output .nc files to yearly averaged .nc files
analysis scripts

FILE OVERVIEW

/doc: Documentation

(non-tracked files, including model documentation pdf's)

/src/ (source code)

python files

constants.py
grid.py
maps.py
OHC.py
paths.py
plotting.py
read_binary.py
regions.py
timesries.py
xr_DataArrays
xr_integration
xr_regression

ipython notebooks

currents
data_overview
geometry
GMST
OHC
SHF
SST
timeseries
winds

/src/ipynb/ (ipython notebooks including output)

copy_stripped_notebooks makes a copy of the ipynb's with output and strips it out

/src/run/ (scripts and python files to run in parallel)

run_OHC_integrals
run_yrly_avg

/src/test/ (test suite)

test_xr_integrals.py