- When sample is not specified, 'sample' is used as a placeholder (instead of an empty string).
- The report can now contain information about multiple samples.
pairsqc.py
now takes sample name as an option (-s). The output files in the output report directory will have the sample name as file prefix.plot.r
also assumes sample names as prefix in the report directory (auto-detect).- Now d3 interactive plots are integrated with the Nozzle report. (https://github.com/SooLee/d3forNozzleR)
- 'Sample' is used as a sample name place holder (instead of an empty string), when sample name is not specified.
-M
option is introduced to work for non-human species (e.g. -M 8.2 for mouse)